© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0430400.1
GGTCACACTAATATAGGATTTTTATAGATTGGCTCAGATCCCCCAAAGCAAATAAATTGATGTCCTTGGCCAGGAAATTACTGAAACCAGCAGATTCATCTCTTCTCTAGCGCACACAAATAAAATACAGGCAATCGACTTACAACAGACTACAACACACACCAAATTGCTAGCCTGCCAAGCTGCTCTAGGCGGCAGCTTCACCAGTTACAAACAGAACATGATGTGCTTAACCCTAACCAGCACAAAACAAAAACGAATCACTCCCATCCTAGCAATATAGGGCTTGGCCCAGGCACCCAGCCATAAACTGACTAGAATTAGCTCTGACAGGCCAAAACCTGCACAACCCTGCACCACATGCTTCTTCGGAAGCATCTGATAGTACAATGACACCGTAGCCAAGTTATCCAAAAACTAATCTTCTGCCCAGGATGCACCGAAATCCAATTGTCATGCGTAGCCAGTCATACCGACATTGGGGGTAGTCTTGTTGATCTTTTTGGCAGCCTGGCTTGTCGATTTCGTGTAGTACATGTAGAAGTACACGTTCAGAATCATAGTGAACACCACGAAGACCGCTCCCGCGATAAAAACTCCTTTGCGCAGGGACTCGCAAGTCCAGCTCCCCACGTATACCATATGCCTATACCTGGTGTGGTACGCGTTCTTTGTTGCTCCAGCTATCAGGCACGACTCCGCGATCATGAATGTGACCCATGAAGATGCAAAGTATATGATTGACCAAGCTCTACTTCCTCCAGGTGCAAGTGGCTTGCCAAAACACATGCATTTGGTAACTACCATAAGAAGTGACTGACCAGAGAGGAGAAACAGGAATGCACCAACACCATAGCCAGTAGCAATATCAGAGTCATAAACACAAAATGTGGAATTGAAGCTGTCTGTAACAATTGAGCCCGTGCTGCGGCGGCGCTCCGCGGCGATGGCGAAGCCGAATGCGGTGAGGCAGAGGGCGATGACCAAGATGTGGACCAGTATAGAGCTCCTCTCGGTGTCCCCCATCTCTCCTCTTGGTTCTCGACGCACTTGCTCACCGGATTCGCTTGCTCCTCAGTCCTACTGGTGAGTGAGTGGGTGAGTGAGTGAGCATGGCAGGAAGGAGCCGAGCAGGAGGGATCAGTCGGCTGTAATGGCGGACGACGGCGGCGGCGACGACGACGACCACGCAGCAGCGATGAATGGCGGCGCTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0430400.1 | 9 | 5995959 | C | A |
| Osa09LNT0430400.1 | 9 | 5991387 | A | T |
| Osa09LNT0430400.1 | 9 | 5991645 | A | G |
| Osa09LNT0430400.1 | 9 | 5992224 | C | T |
| Osa09LNT0430400.1 | 9 | 5992295 | T | C |
| Osa09LNT0430400.1 | 9 | 5992560 | T | A |
| Osa09LNT0430400.1 | 9 | 5992598 | G | A |
| Osa09LNT0430400.1 | 9 | 5992850 | A | C |
| Osa09LNT0430400.1 | 9 | 5993785 | A | G |
| Osa09LNT0430400.1 | 9 | 5993788 | G | T |
| Osa09LNT0430400.1 | 9 | 5994041 | T | C |
| Osa09LNT0430400.1 | 9 | 5994447 | T | G |
| Osa09LNT0430400.1 | 9 | 5995055 | T | C |
| Osa09LNT0430400.1 | 9 | 5995184 | G | A |
| Osa09LNT0430400.1 | 9 | 5995258 | G | A |
| Osa09LNT0430400.1 | 9 | 5995434 | A | C |
| Osa09LNT0430400.1 | 9 | 5995553 | A | G |
| Osa09LNT0430400.1 | 9 | 5995703 | A | C |
| Osa09LNT0430400.1 | 9 | 5995941 | T | A |
| Osa09LNT0430400.1 | 9 | 5996170 | G | T |
| Osa09LNT0430400.1 | 9 | 5996242 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0430400.1 | osa-miR164a | Cleavage | 4.5 | 21.476 | 1 | 21 |
| Osa09LNT0430400.1 | osa-miR164f | Cleavage | 4.5 | 21.476 | 1 | 21 |
| Osa09LNT0430400.1 | osa-miR2926 | Translation | 4.0 | 21.352 | 1 | 20 |
| Osa09LNT0430400.1 | osa-miR3980a-3p | Translation | 2.5 | 10.448 | 1 | 21 |
| Osa09LNT0430400.1 | osa-miR3980b-3p | Translation | 2.5 | 10.448 | 1 | 21 |
| Osa09LNT0430400.1 | osa-miR5075 | Cleavage | 4.0 | 23.105 | 1 | 21 |
| Osa09LNT0430400.1 | osa-miR164b | Cleavage | 4.5 | 21.476 | 1 | 21 |
| Osa09LNT0430400.1 | osa-miR164d | Cleavage | 4.5 | 21.476 | 1 | 21 |
| Osa09LNT0430400.1 | osa-miR164e | Cleavage | 4.5 | 21.476 | 1 | 21 |
| Osa09LNT0430400.1 | osa-miR164c | Cleavage | 4.5 | 21.476 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0430400.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0430400.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0430400.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0430400.1 | 9 | Sub-1(t) | Resistance or Tolerance | Submergency tolerance | C1232 | RZ698 |
| Osa09LNT0430400.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0430400.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)