© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0430500.1
AGTCCAAGTCCAGTATATTATATATAATGTACACTACACTGCTCAAACCTGATAAAATGTCTAAATTAACAGCAACAAAAACACCAGCTCCCTTCTGATAAAAGGAATAACAAATTCTGTATGGACAGATCTATGCTGAATTTGCACTGCTGAAGTCCATGAGCAACCACACCTAGGTGCATTATTACCCACATTTTCTATGTTACAGGAAGGGGCTAGGTTAAGCAACACAAGGGCTTCACACCTTTACTGTACAAAACATTCATAACAATAAGAGCCTTTGGCGCTGAGACTATCCCCAGCACTCAATGAGACAAACTGTTGCGACAAAATTCTCTAACCTGGCCACTAAATTCCCCCAACAGACTTGTCTGCTCATGATGCAGTTGAGCCAGCAGAAAGAGGACCATCTCTCAGCTGCTGAAGACAGAGCTGAAGTTGCTTTTGGATCATCTCGGCGACCATTCGCAATCTTCCTTGGCCTGATTCTCCAACCGCAACAGAGCCATTCACAGTCTCCACTGCCCTGGCGACCTTCTGCTTACATCTTTCCCAGTCCTCGTATTGCAACCAGCAAGCTCTGCCACCATGGCTACCGTCCATTGCAAGGTATGCTATATGGTTGCTTTCCCCAAAAGAATACTTTAGTCGTACGGATACACAATACGGAAGCCAGGCAGCTCCGCCAGCTACATTCATATGAGGAATGAGAGCATGATCAAGTACAAAGGTCAGAGCAAACTCTAGAGAACTGTGGGCTCTATCATACTTAACATTGCTCTTAGCCAAAGTGCTTTCTGTGATATCATCTGAAACTGACCCTGAATGATTTTCCAGACAAATCTCAATCCGGGCTCTCTGAGCAGTGGCCATGTCCCCATGAGCCTGGGAGAAACCTTTCTTCCAAGCAATTAGTTTTAAAAATTCTCGCAGCACTGAAATCGGTAGTGTAAGCAAAGTGATAAATGAAGCAACTCTGGAAGCATCATATGGTTCAGAGGCAACACGCCTGCTGAAATAATCACATATCTCGTTGATTTCAGGTGGAGCTAGCTCTTCCTGTGCACTGTTCTGAGCTTGCTGCTGCTGTTGCTGGTGATGGAATCGCTTGACGCTTAAAACTTGTAGAAGCAATTGAACCCGATGAACACTAACTGCAAATACATAACCTCTGCAAGATAGAAGAAAATATTTACCAGAGATAATAAATTCTTCAATACTTGAACTTGATTGAAAGAACACAAAAATAAGAAGCACTTTGAGCTGCATAAAGAGTCACTTTTCCAGCTTATCGCTTGAGACTAGGTTTGCATAGTTATGTTGATCACAGCCCAATAAATAAAATGAACATCAGAACAATAGTCACTACAAAAGAAAAAAAAAAGAAGCATTCAAGGGTAGTGGGCACTGGGCAGTGGCACAATTTCCCAAAGAAAATCAGGAAGAGCTCAATATTGTTAACACTAGAGTGATATGGATGGGAACTGCCTATGTACAATAAGATTATTGGGCTATTGAGTATTGACCCCAAGGTTCCAAAGCCAGTTTTGCCAGAAGTACTGGACCCTGGTGAAAACCAGTAACTGGACAATTACCAAATTTTTCTGGACAAAAAAATTAGATCCAAATATTTGAAATTTTGAAAAGTGGCTGGCCAAACAAAATCTAAATTTAAATAGTAAATATTATATTCTTTTTCAATTTGAATTCGCATCCTTCCAGCTGATAACCACTCAACTACCCTAGACCGGTGACTGGCTGGTTGCCATTCGTTTTTGAACCCTGATTAGCAATCGACTATTTTATTGTAGCTTACTTCAATGTAGAAGTGAATAACATTTTTTTATGATATCAAAACATGACAACACACTTCAGGTTCTCAAGCAATAGTAGAGATTAGAACAGTAATTTTACCCCACATAGAACCGGAGTGCAGGTTGCTCTTGATCCAAATTCAAGAGAGCACCCTCATTTTCCTTCAAAATCGACCCCAGTATCTCTTTCAGAAGTTCAGGCAATTGTGCAAACAACCATAGAACTCCAAGGTACTTGAGGATCCCTCTTAAAACCTTCTTGAGAGCTGCCAAAGGAACCCAACCACCACCGTAGCCACCATCATCCCCAAGCCCAATGAAAGCTGTATTCAGCTCTCCTTTCACATGAACAGGGAGGTTAGCTCCAGATGTTAGTCGCACAGAGGCCCCACCAATCCCTGAAGCAAGTCCTGAAGAGGCCAACATGGCATTACCTGCTCGACTCAAATTGGCTGCTACATGGTTAGCAACTCCAGAAGCAGGCCTGGACATACCAATACCTTGAGTCGCGTTTACACGATTTGCATTGGGTGCAGGTTGCAGAGTTCCAGCACTGCTATTTAAATGCGCACCGGCCTGTGTAGCATTCATGAAACTGGGTTCAAGAGCATTTAGACCCTGAGCAACATGTTCCATTATGAATGGTCGAAATTGTGGGCACGGCAACGATCCACCAACCAGAGGTCCTCCTTTAGGAGGAGTTGCTGGTTGTAGCCAAACCTGATCCCCAGCGAAACAGCGCATGTCAACAGAAAATTTCTTCCGATATATAATGCGTATCCAGTATGGCCCACGGAGCACAACAGAAACATCAAAGGGCAGCAAAGAACTAGGAACAAGTCCAGGCCCACCCCGTCCAGCAGCGGAAAGCATCGCAGCAGTGTGGAGATTATGACTTCCCAAATGGGTGGCAGCAACATTTGCGGGGGAAGGTGCGTGATGCATGGTTGTTGATGATGAACCATTTGCTAATGGTCCCTGGGTGGGGATGTTGTTCATCTGCTTTGGCATGGAGTTGTATCCAGAAGAAACCGTTACAGGCATTCTTGCTGGACGAATTGCACCCCCAAGGGCAAGCAAAGGCCCTGCTGTCAGCCGAATGCAGTCCAGGAAGGATGCTACCTCACCACCGTTCACGAAATCCTCCAAAAACTTTGTGTGTGGCCAAAGCTGATCAGGAGAAACATGCATTGTGCAGCCTCCCTTAGCACTTTCCCACTCAACAACAAAGTGTACCATAGGCATTGTGCCATAACTGAACCACAAGCTCATTAAGCCAACAGCTTCAATCCTGAAAGTCTTTCTCATTTGTTCAGATAGCCTGTCTGCAGCATCACTATTACCCTTATTAACAGGCTGCGACTTTATATCCGTAGATGTCTGATCATCATCTAGCTTGTCATTAAGTTTGACACCAATCAATCTCCTCATTCCACGGGCAAATGAACGGGCATTTGCAAGCCTTCGTAGATCTGACACAAGCTTCTGAACACTGTCTGGTTCAACATTGCTGTAAGTTAAAATAACACCTTCTGCATCAAAAGAGATATGCGAATCCATCTCAGAGGTGTTTGCGACACGAACACCAACACCCCATGAGGTTGTGGTGCTTCCTGTACTTAGCTCCCAGAGTTCCCTAAAATGTGGATCGTTTATCCTAACATCCCAAGACATACTTCCAGCCTTGCCGAGGCGTAAGCATATGTGTTTCCAAGAATCATCCCGAGCAAAAGGTAACCTTAGCCAAAGATTAGAGGATGGTGATCGTAAGCCCACTTCTTCAACATATGGAATGGCAAGAGAATCCATCTGGGCAGTTATTTGAGCATGTTTAATGGACAATGAACAGTGTCTTATGACATGTAGTAGCACCGAAGCATATGTAGTTGCTGGGACACAATTATTTCTTTCAGCCAGAATATTTCCGTAGGTGAGGCTTGTTCTTGATTGTGAGTCTGATGAATATGCTTGCAAAGGAGACCAACTCTCCATTGATTCTGATATTCTTCTTCGCTTCCTTGGGCTACTGGGTTTCAATCCTTGCAATGAAGGGAGGTTCAGAAATAAATCTGAAATAGAACGCTTTCTAGATGCACCATCAGAGCCCATAGTGATAAGGTTGATTGATCCATTAATCTTGCTTGCAGGGACGAGCTGAAGTGATTTACTTCCATCAGCAATCACATGTTCAGTTGGAGAGCTCAATGAGCTCAGTTCATGATTAGAATTAGAACTTGGCAACTTGATTGAAGATGATTTTGTTACAGTGCTTGAGGAAAAGGCGTTTGTACTTTGTACATGTCTCAAATTACTTGGTAAATAACTGTTCAAACCAACCCCGGGAGAAAATTTTGATCCACTGTAAGCTGATGAGGCCCCTTCAATTGATGCATTAGCTCTAGTACCTACTCCTTGAAAACCAACAGAAAGAGAACCTGGATGAGAGGTAGACTGCAAAGTAGTTTGCGGCAAAGAATGGTTTGGAACAGCAAGAGCCCCGTGTTCATATTCAAAAACTTCATCAACAACAGAAGAGAACGATGGTGAACAAGCAGGCAGCAGTGGAAGAGGCTCAATGCCACTTTGAATGGGGAGTCTATTTTCCATTACGTCATCACAATTCCCTATATTCTGTAGGGCATGCAGCTTCGCATCAAACATATTTGTATTCGATTCACTTTTACTAATCTGTATCTGTCCAATATCAATCTTATTAAACCTCAAAGCTTCCTTTGTGCATGCATTTGTGTTTGTCTTATCATTTGCATCAGATTGTGTCTCAAGCAAATGAAAAACAGGCCTGAAGTCCTTATCAAGTTGCATCAATAGATAATAGGCATTTGCACACTGTGGAAATCCCATCACCATCAGGTCTGAACCATGCAATATGTCCTTTGGAATCTTTAGAGTACCTTGAGACTTCTCATAAACCTTAAGGCCAAAAAAACTTCCAGTAGCAGCAAATAGGTGGAGGATGCTCCTGGTTCTTAAGCTTGCAAAAACATCAGTAGCTGTAATACTCCCTTTATTTAGAGCTTCTTCACAATCTAGCAGTGCAGAAGGGGGTAAGATGTTTTCCGGCGACTGGAGGAGGAAACGACCGCTCCTGATATTTATTCCAAGACCAATATATGCTTGACCATAGGCCCTCACTTGAAGCACCTCATTTCCACAACAATCTGCAAAATCCTTTTGCTCTGTTTTCTTCACCGGGTCCTTTGCTATTTCAACATCTCGTTTGAGGATAACATCTTTTGGTGACTGAGAAATTTGAACATTTTTGGACAGCTGTCTCTGGATATCAAGAAGACGAGTGTGCCTATTAGAAGCAATTGCTCTCAAAATGAGCTGTTCAACATCAATGCAACACAGATCAAGAGAAAGATTGGCTTCTTTATCCGTCAAAGGATCAAGTATAAACGAACTATGCTGGCACTTTATCTGCATGTCTTGCCTGGCCTCAATTTTGATAAATGGTGATGAATCAGATTCTGCTGAGCCACCAGCTTTTTCATCAAGCCAGTAATTTATTTTTAGGCCAGGTATCCTAGAACCACTCAAATCATATTCCCCATCCTGACCAAGCTGCATTAGAGGAGCACTCCCAGTTTGCCCTGTGGTGCTATCTAAGACAAGCTCAGATCTTATTGCATCTTTCCACCTTCCCTGCCGAAGAACATTGGTCTTCCTAATGATAGTGTCCATAGCAAGTGAGATGCACAACTCATGAAGTATGGCATACAGCACCATGAAGGGATTCTCAGAAACTGCCATTCGTCTTTCTATATCATCACCAAGTGCAAATCTCCTCCTCTCTTCTAGCTTAATAGGCCCGCCTTTGTCACCAACAAGTACCTCTAAATGCAAAATCCTCCATAAATCTAAGTGGCCACGATAACCAAGTGTAAGAAGAACTTTAAATTCTCCATCCACACGAAAAACAGCTATTCCATCAGCTACTGAAACATTAGAAACTTCTTTGGGTCTTGGAGTCACAAGAACTTTGTACCGCACGCTTGCATTCAACTTCTGTAAAGCACGCTTCTCTTCATCCGGAGAAAGTTTATTTTGGCTTCCTATATCTTCTATACATAATGGCAATCTTTGATAGTTTCCTGTAAGCATGACTTCTAAAGCAGAAGGGATGTCAAACATAGGAGCTCGAGCTTGCTGCAACCCCTCATGCATAAAGTACAGCGAATCAGCTGTTTGTGTGAAACATGTTTCATGGCTGGAGAGAGTTGATCCAAGCTGTTGACAATAATTAACCAATGGAACCTGTTGGCACCATTTGGCAAGGACATGGAGGCGGAGCATGCGCTGGCGGGTGCGGGCGATGAATTTGAGCAGGTCGATCTTCTTCTCGGAGTCGGACCGCTGCCGCGCGCCATAGGCGCCACCCTTCCCCTCGCCCTCGTCCTGCGACTTCTCCACGAGCTCCCGCAGCGAGAGGTACGACTCCTCCGCCGCCCGCCGCACCACCGCGCCCAGCTCCACCGTCTGCTGCCCCAGCTCCCCCTCCGCCATAACCGCCCCGGAGCTAGGGTTTCCCGCCGCCCGGCCTCACTTCCCCCCCTCCACCCCGCGCGCGAGAGGGGCCCGATGAATCCCACCCACCACCAGTGACCGCATGCGCCGGCGGAGGAACCGGAGATCCTCCCCCTCCCCTCCCCCGCCGCCTCCGCCGCCTCAGTGGTGGCACCCCCCAGCACGGGGTGATGAGGCGCGAGGATTCAGCGGCCGCGCGCGTGTAGACAGAGTGTGTCGGAGGGTGGGGGACGAACGTCGTTCGAGGAGGCCGCCGGCGAGGGAGGAGAGAGGCCGGCTCGGTGGAGGATCGCCGGCGACGGCGGCGGCGGCGGCGGCGGCGGAGCGAATAGGATTTGCCGATTTGGGGGTCGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0430500.1 | 9 | 6044152 | G | A |
| Osa09LNT0430500.1 | 9 | 6041924 | G | A |
| Osa09LNT0430500.1 | 9 | 6041197 | T | A |
| Osa09LNT0430500.1 | 9 | 6041689 | C | T |
| Osa09LNT0430500.1 | 9 | 6041796 | A | G |
| Osa09LNT0430500.1 | 9 | 6041890 | C | G |
| Osa09LNT0430500.1 | 9 | 6037964 | T | A |
| Osa09LNT0430500.1 | 9 | 6038811 | A | C |
| Osa09LNT0430500.1 | 9 | 6039512 | A | G |
| Osa09LNT0430500.1 | 9 | 6039801 | A | G |
| Osa09LNT0430500.1 | 9 | 6039842 | G | A |
| Osa09LNT0430500.1 | 9 | 6040886 | A | G |
| Osa09LNT0430500.1 | 9 | 6041150 | G | A |
| Osa09LNT0430500.1 | 9 | 6044596 | G | A |
| Osa09LNT0430500.1 | 9 | 6044951 | A | G |
| Osa09LNT0430500.1 | 9 | 6045681 | T | C |
| Osa09LNT0430500.1 | 9 | 6045875 | A | C |
| Osa09LNT0430500.1 | 9 | 6045991 | A | G |
| Osa09LNT0430500.1 | 9 | 6046017 | C | A |
| Osa09LNT0430500.1 | 9 | 6046283 | T | C |
| Osa09LNT0430500.1 | 9 | 6047224 | T | A |
| Osa09LNT0430500.1 | 9 | 6047488 | C | T |
| Osa09LNT0430500.1 | 9 | 6047656 | T | C |
| Osa09LNT0430500.1 | 9 | 6047824 | A | G |
| Osa09LNT0430500.1 | 9 | 6048135 | C | T |
| Osa09LNT0430500.1 | 9 | 6048614 | A | G |
| Osa09LNT0430500.1 | 9 | 6042201 | C | A |
| Osa09LNT0430500.1 | 9 | 6042359 | C | T |
| Osa09LNT0430500.1 | 9 | 6042508 | A | G |
| Osa09LNT0430500.1 | 9 | 6043653 | A | G |
| Osa09LNT0430500.1 | 9 | 6043782 | A | G |
| Osa09LNT0430500.1 | 9 | 6038822 | A | G |
| Osa09LNT0430500.1 | 9 | 6047790 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0430500.1 | osa-miR5535 | Cleavage | 4.5 | 18.807 | 1 | 22 |
| Osa09LNT0430500.1 | osa-miR5796 | Cleavage | 3.5 | 9.81 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR5804 | Translation | 5.0 | 13.755 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR5815 | Translation | 5.0 | 13.576 | 1 | 24 |
| Osa09LNT0430500.1 | osa-miR5817 | Cleavage | 4.5 | 14.438 | 1 | 24 |
| Osa09LNT0430500.1 | osa-miR5819 | Cleavage | 3.5 | 21.522 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR5821 | Translation | 5.0 | 22.671 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR5079b | Translation | 3.5 | 9.236 | 1 | 22 |
| Osa09LNT0430500.1 | osa-miR395c | Cleavage | 4.5 | 14.341 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR399k | Translation | 5.0 | 14.678 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR395o | Cleavage | 4.0 | 14.341 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR395w | Cleavage | 3.0 | 14.341 | 1 | 22 |
| Osa09LNT0430500.1 | osa-miR1875 | Cleavage | 5.0 | 12.337 | 1 | 24 |
| Osa09LNT0430500.1 | osa-miR1878 | Cleavage | 5.0 | 16.498 | 1 | 24 |
| Osa09LNT0430500.1 | osa-miR2098-3p | Translation | 5.0 | 17.778 | 1 | 20 |
| Osa09LNT0430500.1 | osa-miR2100-5p | Cleavage | 5.0 | 13.895 | 1 | 22 |
| Osa09LNT0430500.1 | osa-miR2100-5p | Cleavage | 5.0 | 22.361 | 1 | 22 |
| Osa09LNT0430500.1 | osa-miR2905 | Translation | 3.5 | 10.05 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR2871a-3p | Translation | 4.5 | 17.429 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR2871b | Translation | 4.5 | 17.429 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR2920 | Cleavage | 5.0 | 6.275 | 1 | 23 |
| Osa09LNT0430500.1 | osa-miR2920 | Cleavage | 5.0 | 20.593 | 1 | 23 |
| Osa09LNT0430500.1 | osa-miR2930 | Cleavage | 4.0 | 23.19 | 1 | 22 |
| Osa09LNT0430500.1 | osa-miR5078 | Translation | 4.5 | 23.522 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR5079a | Translation | 3.5 | 9.236 | 1 | 22 |
| Osa09LNT0430500.1 | osa-miR5161 | Cleavage | 3.5 | 14.414 | 1 | 20 |
| Osa09LNT0430500.1 | osa-miR5494 | Cleavage | 4.5 | 12.67 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR5509 | Cleavage | 4.5 | 10.561 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR5808 | Cleavage | 4.5 | 19.952 | 1 | 24 |
| Osa09LNT0430500.1 | osa-miR1426 | Cleavage | 4.5 | 13.768 | 1 | 21 |
| Osa09LNT0430500.1 | osa-miR5544 | Cleavage | 5.0 | 12.81 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0430500.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0430500.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0430500.1 | 9 | Sub-1(t) | Resistance or Tolerance | Submergency tolerance | C1232 | RZ698 |
| Osa09LNT0430500.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0430500.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0430500.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)