© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0430600.1
ACCAAGTGTTGAAACATTATACAGAAAGGTTGATTTATCAATGAGAAGGATTCCCCCTTCTCCAAATGAATAATCAATGAGAGAGCACGGTGTTAGATACTGACCCTACAAGCCTAGACAAAAAAATGCTCTACTCTTTCACCTACATATTAATAATTTTACAACAGCTGTGAAAAGATGATTAAGCCCAGATCGGAAGAGAAACGTTAGCAGATATAGCCTGGCCACACCCAGTATTCACTGAGGGGGTCTGAGCCTGCTGTACAGCTCACAACCCGGGCGGCCAAAAAAGTATTCCATCGACCAATTTGGCGCCTTAGCAGGATCAATTGCTCGAGTGCTTCACTTCTCACTAGCTGTATAGGTCACATAAGTAGGACGTGCAGATGGCTAATTGCTTCAACTTTCAGGTGAGGGAGGCCTACGGCTGTACGGTACATAATAGGAGGTTTCCTGCCCAATTGGTGTTTGGAGAAGAGGGTTCCATCGATCAAAGATGATGCGACCACCTCGCCCAATCCTACCCCGGCACCTAAATGGTGGCATGGTTGCACCATTCTCAATGGGAGGATCTGGTGGTGGCTTTATACCTGCTGCTAGCAACTTCTCAGGATCCAATGGTCTTGTGAATAACAATACTGGCTCCTCAGGATCCCTTTTAAACACCCAGCCATTCTGCTGTGGCCTCCTTTTTAGTTCGCGCTCACGCTTTATACGCAATGTAGGGATTACGGATAGCTTATGATCAGCGAATCGAGGACGGAAAACAGGTGGCCGGATATATGGTTGTTCAGTTGTCGTGTCATCTGAATCTGCGTAATCATCTTCACTCGATCCAAATCTACTAGAAACTTGCTGGAAGCCTGACAGTGCAGTCCCTTCATCAACAAGCTGGGCTTCATGCTTATATTTCATCTGAATGCGTCGAAGGTTGACCTCGCATTCCATGGCCTCCCGTTTTGTCTCTTCCCTCTTAACCAAAGCATCCATAAGTGCCTTTGCCTGGTCCAAGTTGCGCCGTACCATGCGAAGTTTTTCGAATGATTGAATATTATTTTCTCGCCTTTGCATCCTTCTTGTATGAAGTCGATGTGCCTTCTCTCTTGGTCTGAATACATTATAAGGGTTTGTATCATTCACTGGTGGAGGCGGCTGCAAACGCCGCAGAATAGGCTTTTGCCATCGTTCCCTCTTGTCTTTCCAATAACTATATACAGCTTGGAAAACTCCATACCGAACAGATAAGTACTGCAATGCCTCCATTGCAGCATCAAGCTGCAAGAGGACTGGTACAGGTCCTATGAAAGTTGGTGTAATGGCTCCTGCTCTTTCTCGAGCTTTGTGGTCCAAAATTTCCAACTTGAATAGGAGGACTTCCAACTTTTCAGGGTTAAGATTCTTCCGCTCATTGTTGAAGTCTTCAAGCCAGTCTTCATCTTCATTGTCCAGATCATATTCGACAAATTCACCAATCTCAGCCCTGGCTCCTCTTCCACGTATATAACAGGTTGGTTGTGCGAAGGTTCGAGTGTAGTCCCTTTCATAGGTGTCCACAGCATCAAACTGAGGCGTTGGTATCTCTTGAATGTTCTTCTTAGTGGGTGTTGGATTTCCCTCGCCCTCCGTGGCAGTAGTAGCAGCAGTGAGCTCCGGCGCGGACTGCCGCAGCAGCACCCCTGCCCTTGCGACCGCGACCGCCGCGGCCGTGGGGTCATCGTCCTCGAACTCCCGCGCCGACTTGAGGATGGGGAGCTTCTTGTGGATGTCGAGCGGCCGCGGCCTAAACGAGAGCCTACTCATGGCCATCACCACCACCACCACCACCACCGCCACCCCGCCGCCTCATCTCATCTCCACCTCCCCCACCTCCTCTCCCTCTCTCTCCACCCCCACACGCGCCGACCGCTACCGCCCCGCAGGGTCGGGGCCCAAGGAGGGGGGAGCGCGCGCGGGCAAACCCTAGGTCCGCGAGGGCCCCGTCAGGCGGGGGCTTGGGTTCCGGCGGCCGCAGGAGCCGCGGGGGGGCGGCGTGAAGGGGGAGGAGAGAGGAGGCTCTCCGCGGCGAGCTAGGGTTAGGGTTTTGGAGGTGGGGAATCGAGTTTCTAGGGTTTGAAAGGAGGTTGAAAGGGAGGGAACGACGGAGAAAGGGGGGTTCGCGGGCGACGAAGGGTGGCCAGGCCGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0430600.1 | 9 | 6252342 | A | G |
| Osa09LNT0430600.1 | 9 | 6252351 | A | T |
| Osa09LNT0430600.1 | 9 | 6252407 | A | G |
| Osa09LNT0430600.1 | 9 | 6252731 | G | A |
| Osa09LNT0430600.1 | 9 | 6254045 | A | T |
| Osa09LNT0430600.1 | 9 | 6254056 | T | C |
| Osa09LNT0430600.1 | 9 | 6254705 | C | T |
| Osa09LNT0430600.1 | 9 | 6254928 | T | C |
| Osa09LNT0430600.1 | 9 | 6255016 | T | G |
| Osa09LNT0430600.1 | 9 | 6255120 | T | G |
| Osa09LNT0430600.1 | 9 | 6255313 | A | G |
| Osa09LNT0430600.1 | 9 | 6255567 | A | C |
| Osa09LNT0430600.1 | 9 | 6255657 | A | C |
| Osa09LNT0430600.1 | 9 | 6256155 | A | G |
| Osa09LNT0430600.1 | 9 | 6256208 | A | G |
| Osa09LNT0430600.1 | 9 | 6256288 | G | C |
| Osa09LNT0430600.1 | 9 | 6256606 | A | G |
| Osa09LNT0430600.1 | 9 | 6256857 | G | A |
| Osa09LNT0430600.1 | 9 | 6257199 | G | A |
| Osa09LNT0430600.1 | 9 | 6257747 | C | T |
| Osa09LNT0430600.1 | 9 | 6258276 | T | C |
| Osa09LNT0430600.1 | 9 | 6258503 | T | C |
| Osa09LNT0430600.1 | 9 | 6258601 | A | T |
| Osa09LNT0430600.1 | 9 | 6258650 | T | C |
| Osa09LNT0430600.1 | 9 | 6258861 | C | G |
| Osa09LNT0430600.1 | 9 | 6259804 | C | T |
| Osa09LNT0430600.1 | 9 | 6259936 | A | C |
| Osa09LNT0430600.1 | 9 | 6260621 | C | G |
| Osa09LNT0430600.1 | 9 | 6258476 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0430600.1 | osa-miR5819 | Cleavage | 4.5 | 16.868 | 1 | 21 |
| Osa09LNT0430600.1 | osa-miR5827 | Cleavage | 5.0 | 15.58 | 1 | 21 |
| Osa09LNT0430600.1 | osa-miR1432-5p | Translation | 5.0 | 22.791 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0430600.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0430600.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0430600.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0430600.1 | 9 | Sub-1(t) | Resistance or Tolerance | Submergency tolerance | C1232 | RZ698 |
| Osa09LNT0430600.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0430600.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)