© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0431200.1
GGGAAGTGGTATTCATGGGTCTATGCATTGATTAACACAAAAACAGAGAGAAAAGATGAACGGTGCAATCTTATACAGACAAGACAACGGAGGTGGTTGCCACCTAGGAGTAAGCTTTCAAAATTAAACTGCAATGCTAATTCATAGCAGAACCTATGTTAACAAAACATCCGGTATAGGTATGGGTGCCCACCAGCAGTTTCAGACTCTCAGGCTCTTCAGTAATAAGGAGAAAATATCACCATATGATCCTTGCAGGCTGCAAATTTCCTTAACCTCGCATCTACTTCTGGCCACCAGGTTTAGATTGTTGCTGTATCTGCTGAAGTAGGGTTGCTGCCAATTGCAATGTTGCTTGAAGGCGCTTTTGAGGGTCTCCGTGATGGTCTTCCTGAGCAGACGGTTGCTGGCTAGTCTGTGGTCCAGAGGGAAGTGCAGGTTGCGCTTGTAGAGCACTTGATGTGTGCTGCCTAAGGGGTGGAGGGCCTTCAGGAAGAGGAGGGACGAACGATCTCAAAGGCATGGAAGAATGAGCTGGATTTCCCGAAGGATGCATAGGGGGTAAAGGCAAAGTGTTGTGAGAAGGCATAGGAGCATTCGGTGTATGCATAATGGATGGATTTGGTGGCACTGAACCTTGAACTGGTGGCGCATGAACCTGTAACTGTGATGCAGATGGCGGAGCAGGTGGCAATGAGTTTTGGACAGGGATAGAACCTGAGCTGTGTGGCATCATTGAAGAATGTCCATGTGGATTCCGTATGAATCCTGATTCTTTGTTTAAGCTGTCCACAGGCTCTTTTCCTGGTTGGTTTTGTTGTGCAAGAAGAGTGGCCAATTGTGCAAGTTGCTCTGGTGGAAGCGATAATGGGAGAGATGGAGGTTGTTGAGGTCTAACTACCTGCTGTGATGCAGGTTGCATGGGAGGGTAGGACATGTTTGATGCCTCATCTGCAACTGGTGCATACCCTGATGTACTCACTTTTGGTACTCCTTGAGGAGCAAATGAGTATGCCTCTGGTGTCCTATCAGTTGATGTATGTGGGATCGCACTCTCAGCCAAATAATTCAAATTTCCAGAACCTGGACTTGGATTGTAAATGTTATCTGACCATCTTGAGGGCAATACATCTGGGTGTTGCTGCTGCTTGTCATGTGCTATCTCCCTGTGGGAGTCAGGTGGATGCTTTTGATGAGCTAATTCAGATTCTAGATATGAAGGAGCATTTCCAAACTTGTAAGGCGGAACCAAATGTGCACTTGCTGGATTATAGCTTCCAGGCGACAACCCGAGATAATCTGAACCCTGAGGAAGTGGCCTGATATCTGGTGGGTTGATTCTTCTCAATGCATCTAGATCCTCATGAGCACGAACATCATGGTTCAAATGACTCACAAATGTTTCTGGTTTGCGAGTTGGCGAGGAAACTTCTGGATCTGACTGCTCAAACTTCAGAATGACTCCAGATATGCTGACTTTACCTGGAACCCTCAGTACTTGTTCAGAGAAGTCTGAGGGTGGAACAAGAAATAAGCTGCTCCTTTCTCCAAGTTTACAAACTGCTGCACGCTGCTTATCACCAAGGTAATTCATGAATTCATTATAGGCTGCCATGTCAGCATCATTTTCTGGAACAAAAAACACCACCCAGCTGCTGGCAGCTTGGTAATAGTGCTTAGAGAGCATCTCCAGGCTTGTCCTAGCAGTGCAATCCAAAAATTCGGGCAGCATGAAGTTAAGAACCTTCCCAACAGGGAAGCATCGCGCTCGGCAAATTGGTGTGCCTCCCTTTGCTATTGTACCATCCCATTTCCATTCTTCCTTGAGAAGGGGTTCATGGTATTCAGGAGTTGATCTTTCCACTTCTACATGCCTAGAAAAGCTGTCCTGTGCATGCCCTGGTATATGCCTATCTACAAGTGGAGTTGGATTCCTTAAAGGATCAACATGATTTCTACCATGCATAGGAGCAAGTTGATAGCCTCTGGGGTGTATGTCATCATCTGGCACACCATAGAAGGGCCTCCTTGGGTAGGCAGAGCCAACCTTCCCTCGATCAAATTCAGAGAAAGGGTATTCAGGAAGTTCAGAGTCATGTGCTTCACCAGTCCTCAACTTCTTTGAAAATGGGTATGGATCTTCCCTAGCATACCGAGAATCCTCTAATGGTAAGGCTCCCTGAGATCGCTCGAATGGAATGTTGTGCCATGGTGCATCACCAGCAGGGCTACGCCTATGCTGTTCATATGGGTCCTCAGACATCCTTCTTTCTGGACCGAGCCCTTGTATCCTAAAAGGTTCAAAATTAGATCTAGGATCAGGCTCTACTCCAGGTCCATATCGCAAATAATTATCCCTGCTGAAACCCACATCATCATGATCTCTAGAAAGTCTCTTAGGGCCATAATGTGGAGATGGCATGTACATATCTCTTGGAGGACTATCAAAAGGCCTAGCCCTAGGAAAATCTTCAAAATCTTGCTCCCTGAATATAGGTCTAACACTAGAGTTTAAATGGGGGGAATATGGGGCATCTAAGGAACCTTTTCCAAATTCTGCTGAAACACTGTCACTCCGAGAAAAGCAAATGCTAACTCGAGGGTTATTGAAAATATTTCCCTGCAGTGTTTCCTTCGCCCTGCATGCCGCTGCAATAGTAGTGTACTGGACAAATGCATAAGTACGCCCTGGGAATGTAGTTATCTTGACAACCTCACCAAAAGGTGAAAAGGCTTCCCAGAGAGTTGCCTCATCTACCTTCAGACCAACAGGAAAACCTATCCATAATACTTCACTAGGTTCTGCTGGCCTGCTTCTTTTGGATTTATCAGTTGATTTTTCAGGACTTGATTGCTGATTCCTTCCTCGTTCAGTAAAACGTCTTTGATCAGCATGTTGTGAGTATCTGTCATCCATAGAGCTACTTGAACCTTTATCCCCCTTGGAAAACTCGATCCTAATGGGCGCCCCGCGGAGGTGGATCCCCTGCAGCTCCCGCACCGCCGCCACGGCGTCCTCCTCCCGCGCGAACGTCACGAACGCGAAGCTCCGGCCGGGGTCACGGGAGATGCCCTCGACGTCGCCGCACCGGAGGAAGAGCTCCGAGAGGTCGGCCGCGGCGACGCCCGGGGAGAGGCTGCCCACCCACAGGTGCCGCGACGGCGGTGCCACCCCCCACCCGGAGGAGGAGCGCCGCGGCGGCGGGTCATCGCGGGCGGCGGAGAAGCGGGACCCCCCGCCGCCGCCGAACCTCCCCCTCCCTCCTCCTCCTCCTCCGCCGCGGCCTCGAGGTCTCCCCATCTGCAAGAACCAAGAAGCCGAACCGCGATTTCGTCAGGGAAACCGCATTCCCGTCAACAGCAGCGGGTAGTGGATCGAGCGTGGGAGGGAGCAGAGGGCACCGTGTACTTCGGTTCGGCGGCGGATGGATTAGGGTTTTCGCCGGCGGCGATGGGTTGGGTGGGTTAGGGTTTCGCCTCCGGGGAGATGGATGGGTGCTCTCTCTCTCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0431200.1 | 9 | 7295543 | C | T |
| Osa09LNT0431200.1 | 9 | 7299632 | A | G |
| Osa09LNT0431200.1 | 9 | 7293804 | G | A |
| Osa09LNT0431200.1 | 9 | 7293854 | C | T |
| Osa09LNT0431200.1 | 9 | 7294149 | T | A |
| Osa09LNT0431200.1 | 9 | 7293682 | T | C |
| Osa09LNT0431200.1 | 9 | 7294510 | A | G |
| Osa09LNT0431200.1 | 9 | 7294524 | C | A |
| Osa09LNT0431200.1 | 9 | 7294940 | G | T |
| Osa09LNT0431200.1 | 9 | 7295079 | A | G |
| Osa09LNT0431200.1 | 9 | 7295226 | A | G |
| Osa09LNT0431200.1 | 9 | 7295431 | C | T |
| Osa09LNT0431200.1 | 9 | 7295917 | T | C |
| Osa09LNT0431200.1 | 9 | 7295940 | G | A |
| Osa09LNT0431200.1 | 9 | 7295979 | C | A |
| Osa09LNT0431200.1 | 9 | 7296539 | A | G |
| Osa09LNT0431200.1 | 9 | 7296789 | C | T |
| Osa09LNT0431200.1 | 9 | 7297209 | C | T |
| Osa09LNT0431200.1 | 9 | 7297707 | T | C |
| Osa09LNT0431200.1 | 9 | 7298620 | T | C |
| Osa09LNT0431200.1 | 9 | 7298815 | T | A |
| Osa09LNT0431200.1 | 9 | 7298921 | G | A |
| Osa09LNT0431200.1 | 9 | 7299100 | A | G |
| Osa09LNT0431200.1 | 9 | 7299328 | C | T |
| Osa09LNT0431200.1 | 9 | 7300415 | C | G |
| Osa09LNT0431200.1 | 9 | 7299686 | T | A |
| Osa09LNT0431200.1 | 9 | 7294628 | T | C |
| Osa09LNT0431200.1 | 9 | 7294852 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0431200.1 | osa-miR5531 | Translation | 5.0 | 20.505 | 1 | 22 |
| Osa09LNT0431200.1 | osa-miR5807 | Cleavage | 5.0 | 21.187 | 1 | 24 |
| Osa09LNT0431200.1 | osa-miR5812 | Cleavage | 5.0 | 17.187 | 1 | 24 |
| Osa09LNT0431200.1 | osa-miR5812 | Cleavage | 5.0 | 17.688 | 1 | 24 |
| Osa09LNT0431200.1 | osa-miR160f-5p | Cleavage | 5.0 | 15.585 | 1 | 21 |
| Osa09LNT0431200.1 | osa-miR171e-5p | Translation | 4.0 | 20.347 | 1 | 21 |
| Osa09LNT0431200.1 | osa-miR166g-5p | Cleavage | 4.0 | 21.334 | 1 | 21 |
| Osa09LNT0431200.1 | osa-miR426 | Cleavage | 3.5 | 18.693 | 1 | 21 |
| Osa09LNT0431200.1 | osa-miR2093-5p | Cleavage | 4.5 | 23.73 | 1 | 20 |
| Osa09LNT0431200.1 | osa-miR2876-5p | Cleavage | 5.0 | 19.635 | 1 | 21 |
| Osa09LNT0431200.1 | osa-miR5071 | Cleavage | 5.0 | 15.85 | 1 | 21 |
| Osa09LNT0431200.1 | osa-miR5517 | Cleavage | 5.0 | 22.962 | 1 | 21 |
| Osa09LNT0431200.1 | osa-miR5837.2 | Translation | 4.0 | 14.818 | 1 | 21 |
| Osa09LNT0431200.1 | osa-miR319a-5p | Translation | 4.5 | 19.179 | 1 | 21 |
| Osa09LNT0431200.1 | osa-miR5522 | Translation | 3.0 | 16.113 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0431200.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0431200.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0431200.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0431200.1 | 9 | Sub-1(t) | Resistance or Tolerance | Submergency tolerance | C1232 | RZ698 |
| Osa09LNT0431200.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0431200.1 | 9 | Sub1 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa09LNT0431200.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0431200.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | R1164 | R79 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)