© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0431300.1
TACCCAACAACCGGTGAGACGAGTTGGATTCCAAACCAATATCCTTAAAATTAATTCCCAGTTCCAGGTGGACAGCATTCACGGTAAAATCTTACATGAAAAATACTCCCAAGGTACATAGCACATTTAATCAGAGCTTAGTGGTCTAGTTCATCGAGAAGTCCGAAGATATAAACTGTCATCAGGCTAAGACAGACAATGTGCAACCGCATCCAACAGAAATAGCTGAAGCAGCATAGCTATCCAGCAACAAAACAGAAGTATCGGAAAACCAAAAATCGGCATGCAGCGTGTGATGATCCTGGCATGAAGTATTCACCTATAGCGATCACGGTCACGCTCGGCTCCTCGCTCCCAGCTCCTCTCATAGCTGTGGTCTCTGCCCCTGTCCCTCCCTCTTTCCTTCTCACGGTCTCTACTTCTACTTCGGCTTCGGCGCCGCTCTCTCCCATGACTGCCTCTATCTCTGTTCCTGCTATCCCGTTCATTGTAGTCATGGTCTCTGCCTCGATCTCTGCTCCTTTCCCTGCTTTCTCTTCTAGTTGAACCACGTTGCTCAACCTCCCATCCAGCCCGTCCAGACCCAGGAAGGGTTGGTGCATTTTCAGTTTGCTGTGTTTTAGCACGGAATTTCTTTTTGAGGTTGCCAAATTCATCATACATCTCCCCGTCATCCTCTTCAGCCTCTTTGCGGCGCCTTTTAACTTCCTCTAGTTCTTCTTCATCAAGTTCTTTATACCCACCACCCCGGCCTCCTCTCACACCACCTTCATTGTGACCTGGCTTAGTGGTGTTACAGATATTACATTTCATCCGCTTTGCCCAATTTATGTTGCCACACATTGGGCATGACCAATCATTTGGACCAAACAGTCCAGGAGGACCACCAACAGCAGCAGCACGGCTGCCTCCTTTTGCATCGTCACTTCCACGGCCTCTACCCCTACCACCACCACCGGCACCTGATCCACTAACACCGGCAGGGCGAGCAGCTCCACAGCGATTACAGACACCACGAAAGGCAAAGTTTACATTGCCACAACTTGTATTTGGGCACAGCCAATCCCCATCTTGCTGCCAGGCTTTTCCTGGACCATCACCGTGCCCTCTCCCTCTGCCTGCCCCGTTGTCCAATTCATCTTGTCCACCAAGGCCAGCAGAGTTGTTCAAACTCGCCGAGTTGTCATATGTGTCTTTGTTTTTTGACTCAGCTATATGGACCTGAATGGTGCTTCCATGGAAATCCTTGTTATTGAACCATTCTACTGCAGCTGAAGCAGCATGTGGGTCTTCATAGGTGACTGTCGCGTCACCCTTTGGTTCATTGGTAACCTTGTCCCTGTAAATCCAGATTTTTGGACGACCGGTCCTTTTATCCTTCTTCAGCAACCCTATGGTGCCAAAATAATCGGCCAGCATGGTCTCATCGGTTCCAGGAGGCAGATTGCACACATAAACAGAGCCATTTGGGGGGCCTCTTGACATATACCCAGCCATCTCCCAACTGCGGCGCTCCGGCTCGAGGCGCGAGCCCGGAGGAGGGGATCGGGCGGCGGAGGCGAACCACGCGGCGGAGGCGGCGGCGGCGGGTGGTGGTGGAAGAGGAGAGGAGAGGAGGCCAAGAGGGGTGAAATGCGGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0431300.1 | 9 | 7348004 | T | C |
| Osa09LNT0431300.1 | 9 | 7348765 | A | G |
| Osa09LNT0431300.1 | 9 | 7349215 | T | C |
| Osa09LNT0431300.1 | 9 | 7349230 | A | T |
| Osa09LNT0431300.1 | 9 | 7349515 | T | C |
| Osa09LNT0431300.1 | 9 | 7349794 | A | G |
| Osa09LNT0431300.1 | 9 | 7349917 | G | A |
| Osa09LNT0431300.1 | 9 | 7349945 | A | G |
| Osa09LNT0431300.1 | 9 | 7350004 | T | C |
| Osa09LNT0431300.1 | 9 | 7350071 | T | G |
| Osa09LNT0431300.1 | 9 | 7350196 | A | T |
| Osa09LNT0431300.1 | 9 | 7350353 | C | T |
| Osa09LNT0431300.1 | 9 | 7350467 | A | G |
| Osa09LNT0431300.1 | 9 | 7350477 | T | C |
| Osa09LNT0431300.1 | 9 | 7350835 | T | C |
| Osa09LNT0431300.1 | 9 | 7351136 | C | G |
| Osa09LNT0431300.1 | 9 | 7351238 | A | C |
| Osa09LNT0431300.1 | 9 | 7351325 | A | G |
| Osa09LNT0431300.1 | 9 | 7351583 | T | G |
| Osa09LNT0431300.1 | 9 | 7349793 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0431300.1 | osa-miR5526 | Translation | 4.5 | 12.789 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR5526 | Translation | 4.5 | 14.81 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR160d-3p | Cleavage | 5.0 | 19.466 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR166d-5p | Cleavage | 4.5 | 11.303 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR528-3p | Translation | 4.5 | 15.317 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR1858a | Translation | 3.0 | 6.585 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR1858a | Translation | 4.0 | 20.199 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR1858a | Translation | 5.0 | 13.182 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR1858a | Translation | 5.0 | 6.887 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR1858a | Cleavage | 5.0 | 9.318 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR1858b | Translation | 3.0 | 6.585 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR1858b | Translation | 4.0 | 20.199 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR1858b | Translation | 5.0 | 13.182 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR1858b | Translation | 5.0 | 6.887 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR1858b | Cleavage | 5.0 | 9.318 | 1 | 21 |
| Osa09LNT0431300.1 | osa-miR2923 | Cleavage | 4.5 | 12.752 | 1 | 22 |
| Osa09LNT0431300.1 | osa-miR5159 | Translation | 4.5 | 8.991 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0431300.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0431300.1 | 9 | Sub1 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa09LNT0431300.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0431300.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | R1164 | R79 |
| Osa09LNT0431300.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0431300.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0431300.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0431300.1 | 9 | Sub-1(t) | Resistance or Tolerance | Submergency tolerance | C1232 | RZ698 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)