© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0431700.1
ATCACAAGAACAATATCAAAATTAACAAATATAATAATGGCGTCCAACAAATACACAACCAAACTGAGATCAAGGACGGTCTGTCACCACAATCTCATTAACATTTTTGAGATTGGTGAACATATACATAAATACTGCGGTACTCATTTGTTTGCTGTAGGGGGACTGTACAATTTTCCGGCAAAATTGGAGATGAAAATCTCCAGATCATACACTCGGCCTGCCAGCAATGTGAAAGATGGATACCTGAATCTACCTCCTGCACTCAATTCAATCAACAAGAGGTTTTCACATAGAACAGGATTCAAGCCATCAAAGACAGTTGAGTTCTTGTTCCAATGAAGCAAAGTCGAACCCGTCCCAGTTGAGTTCTGCATTGAGGTCGAACTTCAGATCTGTGATAGGCAGCGGCAGGTGGCTGATGTCTGCAAGGCCAATGTAATCATCGCCCAGTGGCACATCTGCCATGCCGATAAAATCACTAACTGGGAACGCATCTGCAAGCCTAGTGAAATCATCAGGTGGAAATTCATCAATATGGCCCACACAGTTGCTCACAGGAATCTCATCTATCCTGCCAAGAACAGCGCCCATCGAAATCTCTTTGCCTTTAGGCGTGGACGGCAAGTTCAGCAAGTGCTCATCCTCAGTCTCATGGCTAATCTTCACTGACACTCTCTTCTGCACTTCTGGCTGTGCCTTAATCTTCTGAGCTTGTGGCTGTGCCTTAAACTTCTGCTCAACGGTCTCACGGTTAACCACCACTGACACTCTCTTGTGTTCTTGTGGCTTTGCCTGAATCTTCTGGTCACATGACTGAGATGAGGACACGCAGGATATAGTAACAGAGCTTGACAAATCTTCCTGCTCTGATACAGAAGATTGGATTTTCAAGGCCATCAACTCTTCATGGAACTGGTTTGATTGTGCAAGATATGCCGCAGCGGCCTCCTCCTCACTGTTAAATGTGCCAATCCATTTCCTTGATTTTCGCACAGGGTCACGTATTTCTGCAGCCCATTTGCCCCACGCCCGCCGGCGCACACCCCTGTATTTGCTCGTCGGTTCCTTCTCGGAATCCTTTACAGTCTTTGTGCCACATTGAACAAGGGTCTTAACAGGTTTGGATGCCTTGGAGTTTTCCATTGGAATTAGTATTTCCCTTGAAAATCTCCTTTCCTTCTTATTCTGGTCATCTTCATCAGAGGAGTCAGTGGCATCAGGATCAGAGCAGAAAACACGGACTTTCCGTGAAGAGGGCACCATCATCTCAACGTGCAACCAGAACAAGATCAGAGATTATTGGATTACAATTGGCCTTGATTGCAGTCTGCAGAGAAGGCAGGTAAGAGTTTAGATGAATCAGGACAAAAGTTTGTTGTCTGCTCTCTAAGCTTATCGCAGAAACTCAAAAAACCAGAAACAGAGCCTTTGTCCAACTTCTGTTTAAAACTGGAGCAAAAGAGAGCTCCTGTGTGTACAGAGATGTCCGAGAGAAATCTCAAATCTGGCCGACTTTGTGAACTAGAAGAATGTCAGGTTGCAAAAGTTCGGATTCTGTACTTGATCCACTCAAGCCAAACCAAATCTTAAGGCAATTTGGGGGCTATCTTCAATTGTCACCAGTCTAAATGAAGAAAGCCAAAGTATTTCACCCCAAATCCAAATCTGGAGATCGTGAAGGGATTTTGCTGTGTTCTTGCGCCCCTCGTATACCAATTTTGAAGGAGGAGGATGAGAAGGGAGCAGGAAGAAACCGTTGGCGGCGACTGGAGCTCAGAACCATGGAGAAACGGGGGTAGAGCAGGCGACATAAATCAACAGCGAGCACCAGCTGCGGCGGCGGAGACGACGAGCTCTACTCCTCCTCTTCCTCTAGGCAGCTGAGGCGACGACGCGATCGATGGCGCGAATGACGTGGCAGGAAGTGAGTGAGTGAGGAGGCGGTGGCGGTGAGATGGCGAGGCGGAGGAGGAAGAAGAGGAGGAGGAGGAGGGGTTTATTAATGGTGGTGGTGGGGGGAGGGGAGGTTTTTGGGGGAGAAATTGCGGGCGATTTGGAAGCGAAGCGAAGGAGAGAGAATGAAGAAGACGAGCGGAGGAGGGAGGCGAAACGTGTGATGTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0431700.1 | 9 | 8201938 | A | G |
| Osa09LNT0431700.1 | 9 | 8200182 | C | T |
| Osa09LNT0431700.1 | 9 | 8200391 | C | T |
| Osa09LNT0431700.1 | 9 | 8200538 | A | G |
| Osa09LNT0431700.1 | 9 | 8200547 | T | C |
| Osa09LNT0431700.1 | 9 | 8201275 | G | A |
| Osa09LNT0431700.1 | 9 | 8202401 | G | T |
| Osa09LNT0431700.1 | 9 | 8202797 | T | G |
| Osa09LNT0431700.1 | 9 | 8202745 | C | T |
| Osa09LNT0431700.1 | 9 | 8201088 | A | G |
| Osa09LNT0431700.1 | 9 | 8201784 | T | C |
| Osa09LNT0431700.1 | 9 | 8202730 | G | A |
| Osa09LNT0431700.1 | 9 | 8201594 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0431700.1 | osa-miR5526 | Translation | 4.5 | 19.215 | 1 | 21 |
| Osa09LNT0431700.1 | osa-miR5536 | Cleavage | 4.0 | 21.047 | 1 | 22 |
| Osa09LNT0431700.1 | osa-miR6254 | Translation | 5.0 | 22.768 | 1 | 21 |
| Osa09LNT0431700.1 | osa-miR1882a | Translation | 4.0 | 19.59 | 1 | 24 |
| Osa09LNT0431700.1 | osa-miR1882b | Translation | 4.0 | 19.59 | 1 | 24 |
| Osa09LNT0431700.1 | osa-miR1882c | Translation | 4.0 | 19.59 | 1 | 24 |
| Osa09LNT0431700.1 | osa-miR1882d | Translation | 4.0 | 19.59 | 1 | 24 |
| Osa09LNT0431700.1 | osa-miR1882e-5p | Translation | 4.0 | 19.59 | 1 | 24 |
| Osa09LNT0431700.1 | osa-miR1882f | Translation | 4.0 | 19.59 | 1 | 24 |
| Osa09LNT0431700.1 | osa-miR1882g | Translation | 4.0 | 19.59 | 1 | 24 |
| Osa09LNT0431700.1 | osa-miR1882h | Translation | 4.0 | 19.59 | 1 | 24 |
| Osa09LNT0431700.1 | osa-miR2097-3p | Cleavage | 3.5 | 10.28 | 1 | 22 |
| Osa09LNT0431700.1 | osa-miR396f-3p | Cleavage | 5.0 | 18.689 | 1 | 24 |
| Osa09LNT0431700.1 | osa-miR2118f | Cleavage | 4.5 | 21.429 | 1 | 22 |
| Osa09LNT0431700.1 | osa-miR2118h | Cleavage | 3.5 | 21.429 | 1 | 22 |
| Osa09LNT0431700.1 | osa-miR2118h | Translation | 5.0 | 16.876 | 1 | 22 |
| Osa09LNT0431700.1 | osa-miR2118j | Cleavage | 4.5 | 21.429 | 1 | 22 |
| Osa09LNT0431700.1 | osa-miR2118k | Cleavage | 3.5 | 21.429 | 1 | 22 |
| Osa09LNT0431700.1 | osa-miR2118k | Translation | 5.0 | 16.876 | 1 | 22 |
| Osa09LNT0431700.1 | osa-miR2118m | Cleavage | 4.5 | 21.429 | 1 | 22 |
| Osa09LNT0431700.1 | osa-miR2918 | Translation | 4.0 | 17.135 | 1 | 21 |
| Osa09LNT0431700.1 | osa-miR2922 | Translation | 4.0 | 19.92 | 1 | 20 |
| Osa09LNT0431700.1 | osa-miR2929 | Cleavage | 4.0 | 18.903 | 1 | 21 |
| Osa09LNT0431700.1 | osa-miR5501 | Cleavage | 5.0 | 21.383 | 1 | 21 |
| Osa09LNT0431700.1 | osa-miR156b-3p | Translation | 3.5 | 16.623 | 1 | 21 |
| Osa09LNT0431700.1 | osa-miR2096-3p | Translation | 5.0 | 13.285 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0431700.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0431700.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0431700.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0431700.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0431700.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0431700.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | R1164 | R79 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)