© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0431900.1
GTTGTATCTAATCTCGTACTATAAAGCTATATTTTGGAGTGGAGGGGCTCCAATATTTCATTCATTCCAGAGGTGGCATAACCGCATAAGCTACAGCAGTGCACAAAGGTCTCGATCACAATACATACACGGCTACAGCAGTGCACAAGGGTCTCGATCACAATACAGACACGGCCAGAACGTCGCAGTGCAGGATAAGGTAACAATAGAACTAGATATTGTTCGTTGTCAGATGATTCGTTTCCCCAGTTCAGCTTGGTGAAAAAACGAAAACGGTCGCAGTGGGTGAAAAGAATTCTAGTGCTTGAAGACGATCAGCACGGCAGTGCAGTTGTCCTTGCAACGCCTCTCACGAACAGCTTCCTTCACGAGCCGCCGCACTGCCAGAGTCGCTGACGAGGTCTCCTTCAATTGATTCTGCACAAATTCAACAGCATCACCTGGTCCAAATACTCCCCATAAGCCATCACACCCAAGAATAATAAAATGATCTTTTCTCGTTACTTCAAAGGAGTGGACGTCTGGTGTAGCAATCAGCCCAACCTTCTTAAACTGACGATCACCCAAAGCTCTAGATACTTCAATGCGACCTTGTAATCTGCCATTAGGGCCAACAGATCCTCCAGCCTTTTGGATTCGAGCACGTTCTTGTGGAAAGATTGCTTTATGTTCTCTGGTCAAAACAATAGCCTTCAGTTGACTTTTGGCATCATCCACTGCACCTTCACCATCAGCTGATGTGGAACGAGCTAATACAGCTTTAGCATCTCCAGCATTTGCAACAACCACCGTCTGCCCCAGGACCCAGACACAGACAGCTGTTGCACCATCTTGCCAGTTTCCTTTAGTACTTTCTTGCAGTAAGCACTCATCAGTTCTACGAAAACCTTCAATGATGGCCTTCTTTGCAGCTTTAACATCCATGTGGTAATCCTGCTGCAATAACATTCTGATGCAAATGTTTCTGTGCATACTCTGCAGCCAGGCGACCACCATGTCCATCATATATTGCGAAATGAGCGCACCTCAGGTTTCCCGGAGATTCCATGCTAGCATCAGGAAGCAGCACCCATGCATCTTCCATAGTATGCCTGCAACCCTTGTCTTCTGCAGCATCAGCTTCCACACTAGTCAAAATCACCCCATGGCCACTTGAAACATTCGAGTTGGTTGCTGCTTTCTCATCTGAAACACACGGGTTTGTCGACACCGTGTTTTCCTTTCGAGAGGCATCTCCTCCTTGAGCTTCATCGCCATTCGTTTCATGCGAAGCGTCAGATGTCAGAATGTGCTCCTTTTCAGCAGCAGCGCCGACAACTTTGGGGCGTTTTGATGCCCACTCTTCATCGCCACCGCCGTTGTCGCTGGTTGCTTCACGCTTTTGATGAGCCATGACGACCTGAACTATACAGCTTCCAAGTTCCAACAGCCTCTTATCAATTTCACCAGCGCACTGAGGAGGAGGAGGAGGAAGCGGAGTACGGGAGCCCGCCGGCCGTCGTAGCGCCGCCGTCGCCGGTGAACGAGAGGGTCGGAGAGAGAAGAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0431900.1 | 9 | 8603209 | A | G |
| Osa09LNT0431900.1 | 9 | 8603215 | T | C |
| Osa09LNT0431900.1 | 9 | 8603825 | A | G |
| Osa09LNT0431900.1 | 9 | 8604221 | A | T |
| Osa09LNT0431900.1 | 9 | 8604543 | T | G |
| Osa09LNT0431900.1 | 9 | 8605396 | G | A |
| Osa09LNT0431900.1 | 9 | 8605585 | A | G |
| Osa09LNT0431900.1 | 9 | 8605834 | A | G |
| Osa09LNT0431900.1 | 9 | 8606613 | C | T |
| Osa09LNT0431900.1 | 9 | 8607167 | A | G |
| Osa09LNT0431900.1 | 9 | 8607223 | C | A |
| Osa09LNT0431900.1 | 9 | 8608050 | A | C |
| Osa09LNT0431900.1 | 9 | 8608295 | C | T |
| Osa09LNT0431900.1 | 9 | 8608298 | A | G |
| Osa09LNT0431900.1 | 9 | 8608506 | A | G |
| Osa09LNT0431900.1 | 9 | 8608561 | C | T |
| Osa09LNT0431900.1 | 9 | 8608806 | T | C |
| Osa09LNT0431900.1 | 9 | 8608956 | A | G |
| Osa09LNT0431900.1 | 9 | 8603710 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0431900.1 | osa-miR1438 | Cleavage | 4.0 | 5.066 | 1 | 22 |
| Osa09LNT0431900.1 | osa-miR1881 | Cleavage | 2.5 | 16.933 | 1 | 24 |
| Osa09LNT0431900.1 | osa-miR2870 | Translation | 4.5 | 20.21 | 1 | 21 |
| Osa09LNT0431900.1 | osa-miR2928 | Translation | 4.5 | 9.492 | 1 | 20 |
| Osa09LNT0431900.1 | osa-miR3981-3p | Cleavage | 4.5 | 17.637 | 1 | 21 |
| Osa09LNT0431900.1 | osa-miR5080 | Cleavage | 4.5 | 18.993 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0431900.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0431900.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0431900.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0431900.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0431900.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0431900.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | R1164 | R79 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)