© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0432100.1
CGCGGTGCCCCAACCGCTGCACCAGGGCGAGGGAGAAGAGGAGCCTCGTAGCCGCCATCTTTGCAGCCGGCCGGCTTTGTCAGCGGCTACTCTGGCGGCGGTGAGGCGGGGAGAGAAGGGGCCGGGAGAGAAGGGGCGACGGCGTTTTCGCCGCCCGCGTCTTCCCTGGGGCGGAGCGACTGAGCGCGTTGTGGGGGCCACCTGCTAACATCTTAGCTAACAACCTGCTAACAGAGAGCACTATGACAGACAAAGCTATACTCCGTAGTTTACTTAGCAATACACTAAACACCACTACCTTCCTCCAGATAGACCAGTTAATGTTGTTTCCGGACATGACATCACATATTGATCATAGGCTGCAGTGTCATCACTGTGAACCTCAGTGGTGAAGAAACTTGGTGAGTAGTCTGACAATGTAAGAACCCTCTCGAGGTACTACACAACTTGTTGCATTCTTGGCCTCACATTGGGAGATGGATGCGAGCACAGTAACCCAATCTTTAGAACTAACTCTGCGTCCTCTGCTACACAATCCTCCAGTCTCAGGTCTATGGTGTCGGTGATCGAACCATTTTGCCATGTCTCGAGCACCCAGTCCACCAACACTATAGGGTCGTCACGAGCACTCCTTGTAATGCAAACACATCGGTTGCCTTGGTTGCCTTGCCCAGTCTTGATAGCTCAGGGGCAATATATCCCCATGTACCAGCGAAATGCGTAGTGTGCGCATCAGCTCCATGGTCATGCAACCTTGCAAGGCCAAAGTCACCAAGCCTCCCGTTCATGTCGGTATCAAGGAGCACGTTGCTCGTCTTGATATCACGGTGGATGACTACGTGCTCCCAGTCCTCATGTAGGTAAAAGAGGCCAGATGTGATACCTTTGATTATGCCAAGCCTCATAGCCCAACCTATAGTAGGTGTGTTATCCTGATCATGTAAGTACTTATCGAGGCTGCCATTGGGCATATAGTCGTAGACTAAGAGAAGCTCCTTTTTTATCGGCAGTAGCCTAACAATTGCACAAGGTTACGGTGGCGGACATGGCCAAGGATGGCAATCTCCGCCACAAACTCCTTCATTCCTTGCTTTGATTCCGGAGAAACGCTTTTTATAGCAACATTCTGCTTAGTAACAGCGAGCACCCCTTTGTAAACCCTCCCAAATCCTCCTCTGCCTAAAAAGCATCTTGTCCTCAAATCCACTAGTGGCTGTCACTAGATCTTTGTACCTGAAAGAGCGTGGCCCACATTTGGCCTCCCAATCTTCACATTTCCCAGCTTTCTTCTTGCGGCATAGCAAAACAACAATAACAGCAACAAGGACAGACATGGCAACCAGTACTGATAATATAACAATGGCTAATATGTTATGGTTAGGAAGTTGACAACGATCTTGCTCCTGTCTCTGATTGTTTGGAGGTTTAAGATTATCTTGCTTTGCAAAATCATGAGCCACTTCGAGAGGCAGTGCAGAGTGGTTAAGTGGCTGAGCTTCCCCATCTGTGGTGAAGCTCCAACCGAGAATGTAATGGCCGCTGTGTGTGGGGCCTGTTGCAGATGAAAACCCTATAGATGCTAATTGATTATCTTGCGATATCATGGAGATTAGACTGGACTCTGACAATGATATCAGTGGACGTCGAGGTTTATCCATCAAGTAAGGTGCTAAAGTGACATTTACCGTTTTTGCTTTGCTGTCATACTCCACCCATGCCTGTATTGGTACCTGATCAAAGTGTCAACTCCTTGAACAAATCATCAGGGGTGTAGTACTCTGCGGGTTGAGGCTGAAGGGAAATCAAGCTGCTGCTGTCTAACCCAACATGGTTGTTGTTGATGTCGAAGAATTCACTGTCTCTTTTGGTATCGAATTCGACAGCAAACAAGAAGTTTTCATCATCAAAGGGATCAAGTCCCATGTACATACCTTGCAAGTTGTTCTGTGATCCAATGTTTGTAGATATTACCAATGCAAACCCATTAGCACTCCTGTTGGCATAATCAGAGGAGATGACGAACACAAAACTTGTCGAGAAAGAAGGTATTTTTCCAGCTGACGAAGGGAAGCTCCGGGAAGCATGGCTACTTTTTTGGGGGATGTTGCCAAGGTTCAGGAGTCCCCTTGTGACTGAAGCTTCCCCGTTAAGACTAAGATCAGTATCTTTAAATCCATTGCAGATGAATTGGTCAGAATCAGCATCTAGCTTAGTGGCATGGAGGATGAGGAAAAGGAGAAAGAAGAAGGGCAGCAGAGAGGAAGGAAGCATGGCTAGTTGGCTCTCCTTCCTTCTGCAAGAGATGGGAGGGGATGAAAAAAGAAGAATGCAGTAAGTAGATGGATGCATCACAGGCTACACCGGGCAGCTTTTAGAGAGTTTATCAAACTTTTAAAACTTAGGACTTAGTTTAAAAACAGGAAAAATGGTGTATGCGTAGATTTTCTTTGAAAAGTCATACTTAAACTTATTCTAGGTGATGTAAAATTGTTGGTCAAATTTTTAAAGATTTGATAAAATCTTGTTGGAAGTCCTAACCATCGAATATGACGGGAGGGATAATCTTCTTTGGCTGGTGCATGAAAGCCTGCTACATTGTACAATTTTCGTCAATTGGTGGGATACACATAGTTAAGCATTCTTGGGACCGGCTGTGCAATAGTGATTGGCCAATTTATTTCTTGAGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0432100.1 | 9 | 8689628 | T | C |
| Osa09LNT0432100.1 | 9 | 8691858 | G | A |
| Osa09LNT0432100.1 | 9 | 8691546 | A | G |
| Osa09LNT0432100.1 | 9 | 8689540 | G | A |
| Osa09LNT0432100.1 | 9 | 8689595 | A | C |
| Osa09LNT0432100.1 | 9 | 8689846 | A | G |
| Osa09LNT0432100.1 | 9 | 8690544 | T | G |
| Osa09LNT0432100.1 | 9 | 8690917 | A | C |
| Osa09LNT0432100.1 | 9 | 8691274 | T | C |
| Osa09LNT0432100.1 | 9 | 8691332 | T | C |
| Osa09LNT0432100.1 | 9 | 8691660 | A | G |
| Osa09LNT0432100.1 | 9 | 8691793 | A | C |
| Osa09LNT0432100.1 | 9 | 8690042 | C | T |
| Osa09LNT0432100.1 | 9 | 8690688 | G | A |
| Osa09LNT0432100.1 | 9 | 8690394 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0432100.1 | osa-miR5525 | Translation | 4.0 | 18.976 | 1 | 22 |
| Osa09LNT0432100.1 | osa-miR162a | Cleavage | 4.0 | 18.014 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR398b | Cleavage | 5.0 | 20.832 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR162b | Cleavage | 4.5 | 18.014 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR169f.2 | Translation | 5.0 | 11.004 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR1432-3p | Translation | 5.0 | 20.047 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR169r-5p | Translation | 4.0 | 18.212 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR1850.1 | Cleavage | 5.0 | 14.804 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR5147 | Cleavage | 5.0 | 24.449 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR399a | Cleavage | 4.5 | 19.771 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR399b | Cleavage | 4.5 | 19.771 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR399c | Cleavage | 4.5 | 19.771 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR399e | Cleavage | 3.5 | 19.771 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR399f | Cleavage | 3.5 | 19.771 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR399g | Cleavage | 3.5 | 19.771 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR399k | Translation | 4.5 | 19.771 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR159a.2 | Translation | 3.0 | 23.002 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR2864.1 | Cleavage | 3.5 | 10.139 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR399d | Cleavage | 4.5 | 19.771 | 1 | 21 |
| Osa09LNT0432100.1 | osa-miR399j | Cleavage | 4.5 | 19.771 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0432100.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0432100.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0432100.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0432100.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0432100.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0432100.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | R1164 | R79 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)