© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0432300.1
CTATACTGCAGCAGCCTCTGTATCTTTGTGACCAGCAATCAGATCTTTAAGCACAGCCTTTGATGCCAACTTTTTCGCCAACTTGCAGGGACCTGATTTTGTTGCGGAGTATGTAGTCTCTCCAGCCTTCACCCGAGCAATGACCGATGAGACTCCATCAACATGGTTTTTTTCGTAGGTTATTTTGAATGATCTACGATCACAAAATTCTTGCAGCCCTTTCACCGGGTCAGGCTCGATGGTTTCGGGGGTGGCAAGAGGTTCCAATAGCCGCTTCATGCTTCTCCAAACAACCTCCTTGTCACACTTGCTGTCGAGATAAATTGCACCAGCTATTGATTCAATCACATCCCCGAGAACCTTTGGTAGACCAATGCCCGCTTCCCAGCCATAAGATGGACCTGTAAATGACTGCCCAAGGTAGTAGCTCATCTTCCTATGCAGTTCTGATGATGAGTGAAGGATATGCTTGTTTAATCCTGATTTAACAGCTGCATGCGCGTAACAATTGTTGTTCACAGAGGCAGATCTAAGATCTGTCAACAATTCTGGAGTACAGTCAGGGTATTTGCTGTAGTAATATTCAGTGAAAAGATGATCCAAAATAGCATCTCCAAGAAACTCGAGCCTCTGATAGCATGAAGTAGGGCCAGAAGTCTGATATGAGCCATGTGTCAATGCTTCGAGCAATAATAAAGAATCATTGAACTTGTAACCAAGCATTCCCTCTAAGCTCCTCACATCAATGAACTCTTCAGCTTTCATTGAAATTTTCCTTTCAACTGGAATTTCAGTGTGAAATTCTATATTCATCCCTAATGATTTCATCAAAAGAAATGCTGCCTTTTCCCCAGCAGTACTGAGGTAAGCCCCAATTAAGGCCTCAACTGAATCCGCAATCCTCTTACTTTTAATAGACATTTTCCTTTGGCTGTACATACCATTGGGTGCCAGAAAGGAAATTTTTTTGTTACCACGCTCATCATAGTCCAAGCAAGGGATGATCCAATCTCTTGGATTAAACTCCTCAGCATGAATGTAACCCACAAGATTACTGCTGCAGGCCAGCTGGCACAGAGCTGCATTGGAGATCAAGTTTTTCTTCATTTTTGTTAATATGCCTTCATGTTGAAGCCTGTATTCACTAAAAAGGTGCCGAGTTGTAACATATTTGAGGAAAGAATCCCCAAGTGTTTCTAATGATTCCTGTGAAAATTCTTCTTGGCATTTCTTTGTTGTTAATGCTTCCAGGATCTTCAAAACCGGTACGTCAAACTGCTGCACTGTTGGGCCTAATTGGACCTTTAATTTCACAGAAAGAAGCATGCACTGGATGCGGAACATTATGGAAGGAACATATGAGAAGATGTGCAAATTATTGGCGGACACTGGTGACATGATAATTCTGCAGAGTTCAGGTGGCAACTCAACACTATATCTATCACCAGGTTCTTTTTCTTTTTTATAGTAGTAGTTGTGGAGGAAGTTCCGCACTTTCACATGTTTACTGCCAGCCAAGAGCGGCTGATTTTCAAAAGTCAAAGTAAGACCATGCCTAGTCTTAAAATAATCTTTGTAGGTAACAACAGTCCCATCATGTTGAGGCAAACGGGAATTTGCATCTAAGTCAAGAAACCCACTAATAACATAAAAGATGTTATTATGAGGGGTACACACAATGGAATTTTTAAGGATGCACCTGCAGAAAGGACCATCTTTTGTCTGCAGTAAATCAATATCTCTACAAGAATGGCAATGTGTCATATGTTTGTTGTTAGCTTCATATATTGGTGAGGATGAGAACTTCATACTGCACCAATCAATTCTGCCAGAAACTAAAGGCAGAAGTAGATAGACTACTCCAATAGGCACTTGCATCTCATGGAAGTATTTAATACCATTGCTAACCTCCAAATGGTCATCACCAATAAGAAACGAAAGAATAGTTGTCTGAAATCTTCTAGCAATAATTACCTGTTCTTGATTGAGATGGATGATGCCAACATATTTCATGGTAACACTAGCATTGTCTTGCCCACCTGGCAATTTAAATGAGCTAGAAGTAAAGTCAGATCCCAAATCACACTTCAAAGCTAACAGTATGTCAGTTGGAGAAGCTGTTTTGGGACATCCTTCCAATGAGATCTTATAGCAATAATATATGCCAAGACGAGAAAAGGAGCGCCAATTATCCACAAATTCTTCTGGAAAGTAAGAAGGCTGCTCAATTTTGTTCTCAACAACGATGTCAGGTTCTTCATCACATGGAACATCTAATTCTGGTAAAAGAGAATCTGTGAGTGCACCAATGGCATGTAGTTCTTGGCAGGCCTTAAGACAAACTGTCTCCTTGAGAATAGAACCTTCTCCTTCTACATTAACTGTCTGCACAGGACTGCTCTTAGGAAGATGCAGAGTGCATGTGCCAGATGCCTTGTCTATATCGAACGCTGGAGTTGACTCGACACGGTAATAGGTATCCTCGCACAAGGTGTTCTCAAGTGGTTGACAAGAAATTGATCCCAATCTCAGAGATTCCTCCCGCATTATTTGCCCACTTGCGAGAAACTTCTTTGCATTAGTATGAGCTTCCACATCCCCCCAAGTTACAACTTGGCACATCTAAACCCTCCTCCAAAATTTGTGTGGCAATAATTATATGTACCTTTCCTTTTCGAAAAGATTCAACAATTTCTGTATGATTTTTCCTGCTCTGAGATAGCAAACCAGGACGGCTTCCTGCCATGTGCTTAACATTCCACCCAGACATTTGATGAATAGATGAAAGTAGGGGCTCTAATACTATGCTTGTGATAACTCTCTGAACAAACACAATGCATCTTAAGTCTTGCATATGCCTGTACTGCAGAAGAGTTCGAATAAGGCAATGAACTTTGGGTGTCAATATCCCATCTTGCGAATCAGCTGGAAATTTTTCACCAATATGACCATTCTTCAAGAAACATGAAAGTTCTCTATGTACTTCTTCGCTGTAGTTTCTAATGAAGCCCTCAACATTTTTATCCAATGTTTCACCCCAGAAGGATAGGCTGTTTTCCTCGTATGATTGTACCTCAGCAGCCTTTGCTGCCAGCCATACTCCTAGATTATATAAACAATATACAAATGTACGATGCAATTTTGATATCCTTTGCTTAGCGTTTTCCAGAGATGAACCATGTAGTTTTCTGTCCAGAGCTTCTATATGCTTTTTTGTCAATCTATTCAAACAACTGAGAATATTGGCATGCAGCTCAGATGAAATGTTGGAATCGTCAAAGTGCACTATTTTTGTAGAAGCAAATGGTATGTACTCCGACAAAGCTGATTCACTATCAACAGTGTACACCTTGGAATTCATGAGATTCTCAATCTCAGAAATTTGCTTTGAATAATTGTGCTGATTCAAATCTTTTGAATAAATGAGCGAAGCAGACATCCCAAATATCCTTGGCAGAGGGTCTGACGCACTAGAATTCAACTGGGGGTGATAAAATTCCTTGAAAATGCAGGCGTACGGTGTATTGCCCCTGGCGTGGTGACACTCGTCGAAGATGAGCAGCGCGATGTCCTGGAGGCGGAAGAAGCTGTGGCGGAGGTTGTCGAGCAGGATCTGCGGCGTCATGACGAGCACCTCGCCGTCCTCCAGTTGGGATCGCCAGGTGGCGGCGTCCCAGAAGTCGACCCCCATCTCGCCGCAGAACTGCTTGACGACGAGGTCGGTGTGCTGCTCGACGACGCGCGCCTGCTGGCCCACGAGGACGACGGTGGGGACGAGGAAGACGGCGAAGCGGCGCGAGTCCGGCCTCCGCACGCGGTGCGCGTACGCCCGGAGCAGCATCACCGCGATGAGCGTCTTCCCGCTCCCGGTCTCCAGGAACGCCAGGGTGTTCCCCCGCACCGCCCGCTCCAGCGCCTCCAGCTGGTACCATCTGGCCATTGTCTTCGGGTCGGGCGGCGGCGGAGGCCGGAGCGGTTCCACCGCCTTGGCGCCCCCATCTCCTCGACCTCCGGCGGCGGTGAGGGGGCCACCCATGGCGACGGCAGCGGCGGCGGAGGAGGAGGAGGGGTTTGGGGGAGGAATCGGGGGAGGCGGCGGGATGGGGGTGGGAGAGTGAGGTGGCGCCGACGCTTGGGCCGCCTCCGCCTCCGCCTCCTTCGGTGCACGCACGAATCCGAACCGAATTCCTACGAGTCGCGCGCGCGCGTGTTGGGCTCGAACAATGACGAGAGATAAATGATCTTATGGGGGGGAAGCGGGAGGAGGAGGGATGGGACCAATTGGTAGTGGGAGGCTTCGGGGCGAAGGATTCGCCCCCGCCGGTTCGTTCGAGTGCGCCTTTTGAGTTGACGAGGACCCGAGGAGAGGCTTCGGGGCGAAGGATTCGCCCCCGCCGGTTCGTTCGAGTGCGCCTTTTGAGTTGACGAGGACCCGAGGAGAGGCGACCGGGACCGCGGGGGAATGGGCGCGGCCGTTTGGCGTCAGATGGAGGGGAGGGAATCACAGGTGGGGTACTGGGGGTATGTGGAAGGTCGGGGGGCGGTGACGTCCTTTTGGGTTTTGGCTTTTGCAATGGATTAAATAATTTTTAGATATCATGTCACATGTCACATCGGATGTTTGATACAAATTAAAATAATTAAACGTAGACTATTGATAAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0432300.1 | 9 | 8648773 | G | A |
| Osa09LNT0432300.1 | 9 | 8649459 | T | C |
| Osa09LNT0432300.1 | 9 | 8650615 | G | A |
| Osa09LNT0432300.1 | 9 | 8651429 | T | C |
| Osa09LNT0432300.1 | 9 | 8657215 | A | G |
| Osa09LNT0432300.1 | 9 | 8659171 | G | A |
| Osa09LNT0432300.1 | 9 | 8659838 | T | G |
| Osa09LNT0432300.1 | 9 | 8659937 | A | G |
| Osa09LNT0432300.1 | 9 | 8658792 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0432300.1 | osa-miR5528 | Translation | 5.0 | 15.655 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR5832 | Translation | 4.5 | 13.131 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR5079b | Cleavage | 3.5 | 14.175 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR162a | Translation | 5.0 | 12.965 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR169a | Cleavage | 4.5 | 19.93 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR395u | Translation | 4.5 | 17.394 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR397b | Translation | 4.5 | 15.159 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR397b | Translation | 5.0 | 20.803 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR162b | Translation | 5.0 | 12.965 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR169b | Cleavage | 4.5 | 19.93 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR169c | Cleavage | 4.5 | 19.93 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR169n | Cleavage | 5.0 | 19.93 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR169o | Cleavage | 5.0 | 19.93 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR530-3p | Cleavage | 3.0 | 14.44 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR1873 | Translation | 4.0 | 19.532 | 1 | 24 |
| Osa09LNT0432300.1 | osa-miR2100-5p | Cleavage | 4.5 | 16.487 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118a | Cleavage | 4.5 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118b | Cleavage | 4.0 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118c | Cleavage | 4.5 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118f | Cleavage | 4.5 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118h | Cleavage | 5.0 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118j | Cleavage | 4.5 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118k | Cleavage | 5.0 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118m | Cleavage | 4.5 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118n | Cleavage | 4.0 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118p | Cleavage | 5.0 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2118q | Cleavage | 4.5 | 23.089 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR2866 | Cleavage | 4.5 | 11.156 | 1 | 20 |
| Osa09LNT0432300.1 | osa-miR2876-3p | Translation | 5.0 | 17.053 | 1 | 21 |
| Osa09LNT0432300.1 | osa-miR5079a | Cleavage | 3.5 | 14.175 | 1 | 22 |
| Osa09LNT0432300.1 | osa-miR5152-5p | Cleavage | 4.5 | 9.806 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0432300.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0432300.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0432300.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0432300.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0432300.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0432300.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | R1164 | R79 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)