>Osa09LNT0432400.1

TCTGTGAACAAAAGGAAAGCTCAATAACAGCTTCCACTTTGTGTAGTTATATAAATATTATGTCATGAAGTTACATAATGGAGTGAACCATAACGTTATCTTACAATAGATATGCTAGATAACACATGATAGCTATTTCTATAAATACAAAATAAATAACAAAAAACCATGAAAATAAAATACAAGGAGAGCGGTGCACATCTATATACTTCTTGATAAATTAAACGCTAGAGTGAGCACAATTATCATGTCGAGTTGAGCATGATCTTGGCGGATTATGGTTGCTTCATAAATTTAAAGCAGGTCCTTTGTACAGGTCCCTTCTAATAACAAAGCTGTTAGGGGGCTGGTGTTCTTCCAGCCAAACAAATTCAGGTTCCCTCGATCGGTTTGATAAAATGCCCGACGGGTCTGCTTTTCGGCATCTGCGGAAGTAGGAGCAATGCCTTCCATCTTCTGAAGAATAAGGAGGTGATAAGATGTCCAGGATAGCACAGGGGGTGATGGCTTTGAAAGCATGGATGTTCCCCCCATCTTTTGGTTGAATAACCATTGCGCCGCATGGTGCAGACATCTCACCATCCCTTACAATCTTGGCAGGTCTAACTTTTGATAATTTAAGCAGTTGAGTTGTATCCTCAACCCAATCGTACGATTTAACATGCACGGTACCATATAGAAGTTTACTGAATACAGTCATGCCTGGATGGTTGTGGAGTGGAATGATGGATGATGCTGGAATACAAAATATTCCAATCGAGAAATTTTTGCACTCATATATGTGACGATATCTGATTGTGGTGCTCGAATGAAAAACCGCTTTCCTATTCAGAACTCGTGGACTTCTCCAAGAGCGTACAGATTGTGCTTCAGTCTCAAGTCCAACATCAGAAGGCATGACATTGTCTAACACTGAACAAACACTGTCAACAGCTTCAGGAGATAACGACCCATTTGCAGATAATGACACTTTGCAGACCTCATAGAGCTTTTGTATTGTAGCCATGGAATTGGGAAAGGATATATAAATTAAAATTTCAACCCCACAAGATCCAATTCTAAAAGAAGAAATCCCTTTGACAACAGATATTGTTCGAACTATGCTTGGTCACCTTGGGAGATGGAAGGGGCGATGAGAGGAGAGGAGGAAGAGTGCCCAGGGAGCTCTCCCCAGCTCAATGGGCTCCGGTGGTGATTG

Explanation	CPC Score
noncoding	-1.26689

Transcript ID	Chromosome	Locus	Ref	Alt
Osa09LNT0432400.1	9	8726817	G	A
Osa09LNT0432400.1	9	8727351	A	G
Osa09LNT0432400.1	9	8727396	T	A
Osa09LNT0432400.1	9	8727432	T	C
Osa09LNT0432400.1	9	8727490	G	A
Osa09LNT0432400.1	9	8727965	A	C
Osa09LNT0432400.1	9	8728168	A	T
Osa09LNT0432400.1	9	8728429	T	C
Osa09LNT0432400.1	9	8728452	T	C
Osa09LNT0432400.1	9	8729120	T	G
Osa09LNT0432400.1	9	8729445	A	C
Osa09LNT0432400.1	9	8728085	A	C
Osa09LNT0432400.1	9	8726771	C	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa09LNT0432400.1	osa-miR5789	Translation	4.5	15.076	1	21
Osa09LNT0432400.1	osa-miR159e	Translation	5.0	23.791	1	21
Osa09LNT0432400.1	osa-miR1860-5p	Cleavage	4.5	21.448	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa09LNT0432400.1	9	nan	Resistance or Tolerance	Drought tolerance	R1164	R79
Osa09LNT0432400.1	9	clr9	Resistance or Tolerance	Cold tolerance	RM285	RM434
Osa09LNT0432400.1	9	nan	Morphological trait	Root	C711	G103
Osa09LNT0432400.1	9	qAC9	Physiological trait	Eating quality	RM4413	RM5122
Osa09LNT0432400.1	9	qPC9	Physiological trait	Eating quality	RM4413	RM1896
Osa09LNT0432400.1	9	apd9	Others	Others	CDO590	G103

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus