© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0432500.1
GGCAAAATCACACAAAACTAGCTTTATTTATTTATCTCCTTGAAAGGCCAAATCATAAACACCTAGCCATTCAGGAATTAAAATAGTACTGTACAACCCTGGGCGGTAAAAGAAAAAAAGAAAACAGCACAAGAGAAGATATATTTAACCAATGTGCCTATTCAATACAGACAACTGCCCAGAGTCACCGTTGAACAGGTAAACCTCCAATGGTGAATACAACGATGAGAAGGGCGATGACATGAACCTCGTCGATGGCTGTAAGATCCTGCTTCCCTTGGGGCACGGGATGGTCAGAAGACGTGCCCCGGTACGCATTTGCCAGATCTCAATGATGCCTTTCCGTGGAGCATGGATCGCTAGGCACAGGCAATAGTCACTCTTTGTATATTCTGTGTGCAGTGAGCTCGATGCTTTATCTTTGTTCAGAAGCATCTCAACAAAAAGACATGAAGCATCACGGTAACCCTGGAAACATGAAACAATAATGTTATGCGATAAAAATAATGATCCAGACAGTACAGGATGACTTAAATCTTACGAAGGTGGTTAATTATAATTGTTCAGCACTGTGAAGGACTTGAGGGTCTGCTTGCTATTTCTCCCAGGTAGCCATGGCAGAACAAACAAGCATAGACTCAGGCTGCCTGACCGGGCAAGATTCATGAACTTATGATAAATAGAAATTTCTCAGGTATCGTGCTCAGGGCACCGACCAAACAGCAGTTATTCCAATGCATTGCTGAGCAATTGATTCCCACTGTTCAAAGTTCCCACAGCTGGATCCATTATTATTTTTCTAGATTTGGAGTAATAAACTTATAGTTACAGAAGAAGATATTGCCATATTGGAGATATGGCTATTCTGAAAACAAGATAACAAATACAAAAAACAAATCTGGATGAGCTGCACTTGATAACCACCTTATCTGAATTCTATTTTAAATTAGGTTACAATTTTTTTTGTTTCAGTTGTACTAATTAGGATCTCTTCTATTACATGCTTCGAGCTAGAACTTCCATATAAATAAAGTTATTATATTCATAGTGGGATAAATAAGGCAGAGAACGAGACCTTTTTAAGAAAGATACTACAGACTAAATACAGTTAATGTCTTTTAATCCATTCTTCTTGATCAACTAATATTTGATGAATAGAAGTATGCATGTTTAGATATGTTAGTCTCAAAGGTAATTTAAAGAGAAATATATAAGCTACTACTTCCCACAAGGAATACGCATCAATATGAATGTTTAGATCGCCCATATGAAATTATTTGTAAATCTGCATAAAGGAGCTTTCATAACATTCAACCCCATCAAATTTTACAACATTTTTTCAGTACATGTAGATGATGGAAGTTTTATGCTGAACAAGGCGCTATGAACAAGAAACAGCATTTATTTGTGTCATGACAGTGTATCTAACCAAAACAAATGACTCATATGAAAACTAGCCAACCTAATACCTAAATGAACATTGCTGTCACAGATTGGTTAATTGCTGTTACGCAAAACAAAAGTGTCACCCACCACTATAACATAACTGTATAAAAATAGGTAACAGCAGCAGCAAGTAGTAAATGAACAAATGCTGCCACAAACTGACTAGCTGCAGTAATTGCGATAACACCACGCTAAGATAATGGTTAGTGGTGCAAAAGTTAAGGTACTCCCACAAAAGTAATGCTTTAAGCCTAAGAGGGAAATTCTACGATTTGCAATGGACAAAGGCTTCATTCCATAAAATTCCATCAACAAGGTTGAGTTCCACTATCTGCCATCATACAAACATTTTCTCCCAATTCTGCATCTCTCTATTTATTTATAATGCCCAAAATACCCCAAGACGTGCCATTGTTTGCCAGAGAGCCACTCTACTGAGGGTTTTGGGCATGGACACTGACGAGCTACCAGAGCTAGACATGGAGCAGACGCCAAGCCCTCCATCTGTCATTGCTAATAGAGCGGCCCTCAAAGGCACGCTTGGGGGTATTTTGAACATTATGAAAAAAAAAATGGATGTCTAATGGCAGAATTCAAAGCAAAATGTTTGCATGATGGCATATTATAGAACTTATCTTCGTCAATGTCTTTTTGTAAGTGTCAATGGCAAATCGCAGAATTTCTCTAACCTAAGACTATAAAGCTCAACAAGCTAGGATGTGAGAGCAGCAGACAAAGCAAAATACCATTTTATGTGCATCAACCTAAGCCTCGCACAATTAACCACTAAAGGTGGTGCAATCCAGAAAACCACACTAGAACATGGTACCAGGCTACCAGCACATCGAGAGCAAAACAAATGTGTCACCAAGATGGCAACACAGCACAACCAACAAATAAATGAAAATTGCCTTATGCCCTTATCATTGCATTTTATATCAGTATCGATGTAGAACACAGTTCCTGTGTTCCATTTCAAAATTTCAGAAATAGAAAATGAAGTTATACTCAAGTAATTACCTTCCACAGCCGTACAGCCACAAGGGCATGAGTATCCAATAGTAGAATGCGGCCAAGAGAATCAGTTATGGCAGCCAATGTACCACTTGGAGATAGTGTAAGCCGTTCACCCTTCCTCGGTGAATCTTTCAAGCAAGTTAGTGGTGATGTTTTTGCAAAGGACTGAGGCTTAGGACGTGATTTCTTGGTTGGTGATGGTTCGCTCCGCCATATAATTTTAGACAGAGATGATATTGTTGAAAATGTTGCAGCAACACCTCTTGATAAAATTGCTCCAACAATTGACCTGCTTCTGTCTTCTGATAACCTATATGCAGAAACTACAGCATCCTCTCCAACTGTAATTGCACAATAATGGCGCTGACTCGACTGCCCAGCAATATAAAAGCAGCTGAAGTTCCAGCAAGGGAGGTGGCATCAGCCCAACAATTGCAGCATCTGCACAAGAACTGAATTTGCTTACATTCCAAATTTGAAAAGGTATTCTTCCAAAGGAACTATCTTCCTCAGCATCTTCCTGTTCAGATTTGTCTTTCCACAGGTGTGATTTAACTTCATGTAATGATTTTTGAAGCATGTTCTGAAGGTCAGCACCATCAAAACGTGCAATAACACCAGGGAAAACCACAGAAAGCTCATCTGAACCCGAATCTTCCCAGGCGTTTTCCTTCCTCTCACGGAAGTTAAGTTTCAGTATCTTTGAAGGATAAATACTCTGCTTGTGCAGTAGATCGCCTGCGAGAGAGTAGAACAGAAGCCACCCGGCGTCGGTGCCCACGGCGACGGCCACTCCCTCCCCACCAGCCTCCTCGGCGTCCTCCCCGACGAGCGGGACCCACTCCACCGCGGAGATCCGGCCGTCGTCGGGCCCCAGCGCGGGCCTCACCGTGACCCCACCGCCTACTCCGGCGACCGGGACAACCGCGAGCACGGACCTCGCCGCGCTGGCGACGGCGAGGGCGCGCGCGCGCGGCGCGAGGGAGGGGAGCACGGCGGGGTCGTCGAGCCACCCCTCCCTCTCGCCGGCGCCCACGGCGGCGAGGTCCTCGGAGGCCGACGCGAGGAGGGCCACCTCCGCCAGGTGGTGGTGGTGGCCCCGCCGCGCCATGGGGAGGGGAGGAGAGAGGAGGAGAAGCTTCTGGAAGCTTCGAGGCGGGGGCGACGAGATGCCGCCGACGAGGGGTGGAGAGGAGGAGGCTTTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0432500.1 | 9 | 8712546 | A | C |
| Osa09LNT0432500.1 | 9 | 8710984 | A | G |
| Osa09LNT0432500.1 | 9 | 8712419 | C | A |
| Osa09LNT0432500.1 | 9 | 8710827 | A | G |
| Osa09LNT0432500.1 | 9 | 8711116 | T | C |
| Osa09LNT0432500.1 | 9 | 8711321 | T | C |
| Osa09LNT0432500.1 | 9 | 8711967 | A | G |
| Osa09LNT0432500.1 | 9 | 8712497 | C | T |
| Osa09LNT0432500.1 | 9 | 8713198 | A | G |
| Osa09LNT0432500.1 | 9 | 8712984 | G | T |
| Osa09LNT0432500.1 | 9 | 8713247 | A | G |
| Osa09LNT0432500.1 | 9 | 8713381 | A | G |
| Osa09LNT0432500.1 | 9 | 8714345 | A | G |
| Osa09LNT0432500.1 | 9 | 8714676 | G | A |
| Osa09LNT0432500.1 | 9 | 8714751 | A | G |
| Osa09LNT0432500.1 | 9 | 8714957 | C | T |
| Osa09LNT0432500.1 | 9 | 8715417 | T | C |
| Osa09LNT0432500.1 | 9 | 8715516 | A | T |
| Osa09LNT0432500.1 | 9 | 8715594 | G | C |
| Osa09LNT0432500.1 | 9 | 8715717 | A | G |
| Osa09LNT0432500.1 | 9 | 8715743 | G | C |
| Osa09LNT0432500.1 | 9 | 8715891 | C | A |
| Osa09LNT0432500.1 | 9 | 8716620 | T | G |
| Osa09LNT0432500.1 | 9 | 8716776 | T | A |
| Osa09LNT0432500.1 | 9 | 8713338 | G | T |
| Osa09LNT0432500.1 | 9 | 8712162 | C | T |
| Osa09LNT0432500.1 | 9 | 8710490 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0432500.1 | osa-miR5820 | Translation | 5.0 | 23.86 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR5822 | Translation | 3.5 | 17.73 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR5828 | Cleavage | 4.5 | 9.568 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR5079b | Cleavage | 4.0 | 16.213 | 1 | 22 |
| Osa09LNT0432500.1 | osa-miR5079b | Translation | 4.5 | 8.786 | 1 | 22 |
| Osa09LNT0432500.1 | osa-miR167h-3p | Cleavage | 4.5 | 11.173 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR167h-3p | Cleavage | 4.5 | 10.738 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR169i-5p.2 | Cleavage | 5.0 | 8.195 | 1 | 22 |
| Osa09LNT0432500.1 | osa-miR417 | Cleavage | 4.0 | 8.34 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR426 | Cleavage | 4.5 | 17.967 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR437 | Translation | 5.0 | 15.13 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR1432-3p | Cleavage | 5.0 | 24.738 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR444d.3 | Cleavage | 5.0 | 19.848 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR1850.2 | Translation | 5.0 | 13.972 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR1881 | Translation | 4.0 | 18.481 | 1 | 24 |
| Osa09LNT0432500.1 | osa-miR2095-3p | Cleavage | 4.5 | 16.257 | 1 | 20 |
| Osa09LNT0432500.1 | osa-miR396f-5p | Cleavage | 4.5 | 17.068 | 1 | 22 |
| Osa09LNT0432500.1 | osa-miR2868 | Cleavage | 4.0 | 20.074 | 1 | 20 |
| Osa09LNT0432500.1 | osa-miR2876-5p | Cleavage | 5.0 | 18.433 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR5079a | Cleavage | 4.0 | 16.213 | 1 | 22 |
| Osa09LNT0432500.1 | osa-miR5079a | Translation | 4.5 | 8.786 | 1 | 22 |
| Osa09LNT0432500.1 | osa-miR5162 | Cleavage | 4.5 | 16.408 | 1 | 24 |
| Osa09LNT0432500.1 | osa-miR5338 | Cleavage | 4.5 | 20.694 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR5338 | Translation | 5.0 | 10.632 | 1 | 21 |
| Osa09LNT0432500.1 | osa-miR2879 | Translation | 5.0 | 11.236 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0432500.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0432500.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0432500.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0432500.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0432500.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0432500.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | R1164 | R79 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)