© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0432600.1
CGAAATACTATGATAGACCTACATAAGATGATCAAGACGCCATGGAAAAATTATTTTCAGAAAAGAGGTTCATGCAGGAAGCTTTTGTACAAGCCTAAGTAAGATGGGATGCAACATAATTAGTTTTCTCTTGTCCGAATAGGAACATTTTGTTTTTGGCATGGGATGCAATGTGAGATCACAGCTGACACCCCAGAATGTTCTCACGACAACCAACAAAGAGGTTGCCTTATCTACACTATAGCTGTTCAAGCATTCTTGCCGTCGATGTTGCATAGACATCACTGTTCAAGCATTCTTGCTAGTGTAGATCAGGTTAGCAAAATGGACATTTCTGCCAGCTGAATGAACATTCCTAAGAACTTAGACGAGCCAACTAAAGCTGACTACATATTGATCCATCACTTACAGGATTCAATTAGTCAAGTTCCACAAACTGGATGTCAGTAAGTCTAGGCTAAACTTGCAAGTGATCTATGACTAGTCCCTTCATTCAACAGGTAGAATAGAAGGATCTATGACTAGCTAGTGCTTGAGATGACATTTGCACAGTAACGCTTTAAGACAAATTGAAGCAAGGGCACTAATTGCCATCCTTGCTGAATAGCATTCCTCCTATATGCCTCAGTGCTTTCTCATACTCTGCCTTCTGAAACTCATCGAACCTTGAAGTGTCTGCCAGCAACAGCTCCGTGTACTTCTTGTAAAGTGTAGTTTCCTTCTTCTCCCTTGCTTCTTCCTGCTTTATTCTGGCCAATTCAAGCTGCTCTTTCGAGAGGCGGAGCTGTACCTCTGACATCTTCACACGATCATTGTTAAGCATGGTCTGAAGATGCATCGCATGTTTGATGTCTTCTTGCACCTCGCATGAGGAAGACGATGCCTTGCCTTTACGTTTCCGACTGAACTTTGGTGCCTTGCAAATTCGTGGCTGTGTTTCTTTTCTAGGAATGTTTTCCCTTGTCGCCCTCTCGTTGTCTTGTGCATCGAAACCTTGTGGACGTGATTCTTTTTCAAGCATATCATCCCTTACTGCCAACCCCTGTTGATGTTCATTCAATTCTGAAGTGTCAACAAGACGAAATCCAGTGGGCCAGGAAGTATCAGCTGTCAATAATTCTGATTGCTTCTTGGAAATTCCTGTGTCCTTGGTGCAAGCATCTTGTTGTTTCAAACTGGCCAACAGAAGCTTTTCATTGGAGATAGAAGGCTCTACTTCTGTCAGCTCCTCAGGGTTCTTGATAAGCATGTCTTCTTGCATCTCTGAAGACGAAGTTGACCTCTTAACTTTAGCTTCCTTAGATGTCATGCAAACTTCTTCACCTATTTCTTTTCCAGGCATTTCTTCAGAGTCTTCAGAAGACGACATGTACTCCCAAGAATCAGACTGCATTGTTCTTTTCGTAAATAAACAAGACATGTATGCTTTCCACTTGGGTTGGTTCCAAACTGCTTTCCAGCAATGGTCGAAGGCGAAATTATGCTCTGCTTCTTCAAGATACATCACACGTGCTTCCTCATTATACATCAGCCAAGTTTTGTCCATCAGTTGCATGCCCTCAGAGTGGCCACTAGGATATTTTGCCTTAACCCGGCACCAACAATCATGGAAGTGTGCCACCTTTCTGAATATCTTGTGCCAGTGGCCCTTCACATGTTGAAGTTCCCTTCTTCGAGTTGCAGGGATTGTACTGTTGTATTCTGCTACAACCTTTTCCCAGTACCTGTCAGTCTTGTAATAAATCAACCAGGCGCTTATCAATCTTATGTCCTCCTTTTCTGTCCAATATAGTCGCTTAGTAGCCTTCTCAGGTTCAGCATTGTCAGTGCCTTGTTCTCCTGGACCAGTTATTGAACGCGGGGTGCCTTGGTCAGACGGTGCCTTGGATGGAATAACTGGAGCAGGTAAAAATGTTGATGGCATAGCTCCAGCAGGAGGTGGTAATGTGTATGGAGCATATTGTGGTGGAACAGCATATTGCAAATTTTGTGTGTATGGAGGGTAGTGAGGAAATGGTGGGAATGGGAAATTCATTGCATATGGTGGTTGTGAAAATAGGTGCTGCGGATATTGTTGGTGGCAGAAATTCATAGAGCTGTCTTTATCTGGTGTGACATTTTGACAACTTTTTTTATCTGAAGAACCACCAGGTGGGCGAGGACCCATTGCAAACGAGAGAAGATTGTACGGAATGTGTATATTGGGTGTGATCAGATGTGTGTGAAACACATGGGTTTGGAGGCAATTCTGAACCACCTATTTGGCAAATGTTCCCAACAAACTGTTAAGGGAAATATACCCAATAGCTCTTTTGTTCAGCTCTTTGTGTACTTTCAGTCACTGTCCTGGAGATACCACAAATCGGAAACATTAACACTTGATCTCCCACTAGACCAAAGCAGGTCAGCAGAAACAGTAGTATTGCAATTAATTGTGTCAAGGCCGGTGTAACACTCCTAATCCAGCTGGATTCTTGGGCTCAGGCCTCCTGCTTCGATCCCTCCTCCTTGGGTGGAAATCAGAGATTGACGGCGAGGGCAACAGCCGGCTCCTCCCCGATGCCTTTCTCGGAGCACATCAGGAGGTCGGAATTGCGGCGGCGGGAGGAGGAGGAGGAGGCGTACGCGAAGCAGCGCCGCGGAGACGGGAAGCTCCCCCGGCGCAGCGCGTTAGGGCCGCGGTGGTCGGGAGCGCGGGCGGGCGGCGGCGCTGCGTTGGAGGATGGAGATCACGCGGGGGCTCGCCGGCGGCGAGAGGTCGGAGCGCGGCGTGGGGGGAAGGAGGCGAGGGTTTTGGCGGCCGGATTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0432600.1 | 9 | 8970705 | G | A |
| Osa09LNT0432600.1 | 9 | 8970297 | T | A |
| Osa09LNT0432600.1 | 9 | 8970394 | C | A |
| Osa09LNT0432600.1 | 9 | 8970831 | T | C |
| Osa09LNT0432600.1 | 9 | 8971148 | G | A |
| Osa09LNT0432600.1 | 9 | 8971838 | A | G |
| Osa09LNT0432600.1 | 9 | 8971889 | A | T |
| Osa09LNT0432600.1 | 9 | 8972748 | A | G |
| Osa09LNT0432600.1 | 9 | 8973022 | G | A |
| Osa09LNT0432600.1 | 9 | 8973531 | T | G |
| Osa09LNT0432600.1 | 9 | 8972047 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0432600.1 | osa-miR5540 | Translation | 3.0 | 17.547 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR164a | Cleavage | 5.0 | 15.169 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR164b | Cleavage | 5.0 | 15.169 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR164d | Cleavage | 5.0 | 15.169 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR164e | Cleavage | 5.0 | 15.169 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR393b-3p | Cleavage | 5.0 | 19.182 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR164f | Cleavage | 5.0 | 15.169 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR444b.2 | Cleavage | 3.0 | 20.754 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR444d.3 | Translation | 4.5 | 18.944 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR1428e-3p | Translation | 5.0 | 16.708 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR1865-3p | Cleavage | 4.5 | 14.377 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR1882a | Cleavage | 4.5 | 20.957 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR1882b | Cleavage | 4.5 | 20.957 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR1882c | Cleavage | 4.5 | 20.957 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR1882d | Cleavage | 4.5 | 20.957 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR1882e-5p | Cleavage | 4.5 | 20.957 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR1882f | Cleavage | 4.5 | 20.957 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR1882g | Cleavage | 4.5 | 20.957 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR1882h | Cleavage | 4.5 | 20.957 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR2091-3p | Translation | 4.5 | 23.971 | 1 | 22 |
| Osa09LNT0432600.1 | osa-miR2118e | Translation | 4.5 | 23.971 | 1 | 22 |
| Osa09LNT0432600.1 | osa-miR2118p | Translation | 5.0 | 23.971 | 1 | 22 |
| Osa09LNT0432600.1 | osa-miR2118r | Translation | 4.5 | 23.971 | 1 | 22 |
| Osa09LNT0432600.1 | osa-miR1863c | Cleavage | 4.0 | 7.915 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR1863b.2 | Cleavage | 3.0 | 7.983 | 1 | 23 |
| Osa09LNT0432600.1 | osa-miR812n-5p | Cleavage | 3.5 | 15.799 | 1 | 24 |
| Osa09LNT0432600.1 | osa-miR5339 | Cleavage | 4.0 | 20.697 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR5523 | Cleavage | 5.0 | 14.405 | 1 | 22 |
| Osa09LNT0432600.1 | osa-miR444c.2 | Cleavage | 3.0 | 20.754 | 1 | 21 |
| Osa09LNT0432600.1 | osa-miR444f | Cleavage | 4.0 | 20.754 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0432600.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0432600.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0432600.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | R1164 | R79 |
| Osa09LNT0432600.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0432600.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0432600.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)