© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0434400.1
TCACACCCAACACAACGCATTTAAAAAGTCCAATCCTGTTAGTTCTTGGAGGTAATATGCTCTTCAGTTCAGTCTTGACTAATCCCCCTCTTTTCCTCCCAAATTACTGCACAAAATTTGGCCATCAAGCAGCCCCACGAACAGCCCCTAACTAGGTTCGGAATTTGCCAAAGAGGGTTGAAATGTACCATCACCGGGGGGGGGGGGGGGTTACTGTACTCATCAATGAGTTCTGAACCAAGCAAAAAGTTTAGCCCCTAACTAGGTTCGGAGTTCCTGTTAGTTCAGCATTAGCGCATACGGCAAGAGGCAAGAGGCAGATGTGTATTTGACAGTTTGACACAAGCCATCAGGAGTGCTTTGGCCGCCGGGACAATCTTCTCAGGTTCACCCTCTCCTGGGTTCCATCATGGTCGTATTCGACAAGGAAGACACATCTGCACCCCCTTATATCATGTTGTTTCCGCTGGATTTCCAGAACATGCGCATCGAAATGCAATGCTTCATCATTGCTCTCCTTGAAACAGAGGACAAGGTCTCCTTCCCTGATGAGTTTGCATTCTGATGATTCCAACGGGATGGATTGCAGGCGGATAGCCTTCCGGACATTGATCCATTCATCCTCTTCAGCCCCAAATCCTTGAAATCTCACTCGGACTTCCTAGAACAATAATGAAGAAATAGAGTTTTCAAAAATAGATCTTTAATTTGTACGGTGCGAACAATTATAAAATGCAATAACGAGATTCATGTGATCAGACCTAAGAAGAAAACGAATATGTTATCATTGAAGACTCTCCAAAATCCATGTGGTTCAAACTTAAGATCAAGCTGAAGCGCATGGAAACGTTATTATTAAAGAGTCTAAAATTTTTAGTAGTATAAAGAAAGGTCCGGAATTTTGAATCAAAGACTTCTTGGGAGAAAGGCAGCATACAATTAGTAACATAGGGGTCTGAGACATTCTAAAATTCAGGGCAGTGCACAAATACTTCTGAGGAAAAAAAAAAAGAACACATGACATATGCTAGCAAGCCGATAAATAAACTATCAGCTGAAGAGACATAAATGCAAACATATCCTACAACATCAATTATTCTACTTACAAATTCACCAGAACTTAACTTCCTGTATGCTAAGAAAGTGGCGATATCATACCTGCATAGCACAGAAAATCATGTGATGACTATGGCATTAGTGTTGGCTTGCCAAAGTTAAGAAACAAAACAAGATAAGAAAACTTGAAATTAGTCAGTACATGTACAAACATTAAACTTCCAGCTTCATACAGCAGTACTAAGTACTAAGAACACTGCACAAATGCCCAGTTGCAAAGTTAACTGAGATCACTACCACAGTTCTAGCATTCTAGGTTCTAACGTACCAAACTAGCATAATCAGGAAAGGAGCAAGTGATTTGTCATGGCAAACCTTCCCATTGATGGGAATTATGTCTCTAAGTACTCCTAACACAACAAACTTGGGTACAACTTTCAACAGAAGTTAAATATATTGCTTGATCCTGCATGATTAGCATTAAAATTTTGAAGACAAGGAAATGGAAAGTATATGGGAGAAAGGGTCAAAGGAAACAAGAATTGTATCGTTACAAAGTAAAAGGGTATTCACCAAGCAAAATCCTTTGAAGACCTAGCCTCGAACTGCATGTCTTCAATTTCAGGAAGCTTATCTATGTTGTCTATAGGTAAATCCGGCGAAACCTCGCCTATATCATTTGAAATGCTTGTATCAACAGCTAAAGCATTTTCTTCAGATGATGGAGGCTTTTCTTCAGAAACCGGTGCACTTGCTTGGGAGGCTAAAGCCTTTTCTTCAGAGCCAGTAGGCAAACAAGGAGGTATAACAGTTGATGCAGGGAACTTTTGACGGAACCATTCTTGAACCTGCACAGCCTGTAGTGCTTTACTTCCAACTCGGCCTGGAGAACAATTAAATTCTTCTGCGAGCTTCCGGCAGAAAATTTCATCCAAGACTTGTTCCTTTTTATGTGTAACCAACTTCTCCATCCTTGCAATCTCGGATGGCGCGAAGCGAACGCTCGATCGCCGCTCCATTTCTCGCCGCCGGCGAGGTCTCCGCCGCCGGAAGAACGGGGAAGACGCCCTCCTCCCAACTTGCAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0434400.1 | 9 | 10875684 | A | G |
| Osa09LNT0434400.1 | 9 | 10877332 | A | T |
| Osa09LNT0434400.1 | 9 | 10873188 | A | G |
| Osa09LNT0434400.1 | 9 | 10873221 | G | A |
| Osa09LNT0434400.1 | 9 | 10873741 | A | C |
| Osa09LNT0434400.1 | 9 | 10873780 | A | G |
| Osa09LNT0434400.1 | 9 | 10873968 | A | G |
| Osa09LNT0434400.1 | 9 | 10873979 | A | G |
| Osa09LNT0434400.1 | 9 | 10874089 | T | C |
| Osa09LNT0434400.1 | 9 | 10874348 | A | G |
| Osa09LNT0434400.1 | 9 | 10875155 | G | C |
| Osa09LNT0434400.1 | 9 | 10875355 | A | C |
| Osa09LNT0434400.1 | 9 | 10875997 | A | G |
| Osa09LNT0434400.1 | 9 | 10876117 | A | G |
| Osa09LNT0434400.1 | 9 | 10876761 | A | T |
| Osa09LNT0434400.1 | 9 | 10876889 | A | C |
| Osa09LNT0434400.1 | 9 | 10877100 | A | G |
| Osa09LNT0434400.1 | 9 | 10877731 | A | C |
| Osa09LNT0434400.1 | 9 | 10876720 | A | C |
| Osa09LNT0434400.1 | 9 | 10876790 | C | G |
| Osa09LNT0434400.1 | 9 | 10876786 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0434400.1 | osa-miR812v | Translation | 5.0 | 5.84 | 1 | 24 |
| Osa09LNT0434400.1 | osa-miR159a.1 | Translation | 5.0 | 22.856 | 1 | 21 |
| Osa09LNT0434400.1 | osa-miR159b | Translation | 5.0 | 22.856 | 1 | 21 |
| Osa09LNT0434400.1 | osa-miR159c | Translation | 5.0 | 22.856 | 1 | 21 |
| Osa09LNT0434400.1 | osa-miR159d | Translation | 5.0 | 22.856 | 1 | 21 |
| Osa09LNT0434400.1 | osa-miR159e | Translation | 5.0 | 22.856 | 1 | 21 |
| Osa09LNT0434400.1 | osa-miR319a-3p.2-3p | Translation | 4.5 | 21.794 | 1 | 20 |
| Osa09LNT0434400.1 | osa-miR319b | Translation | 4.5 | 21.794 | 1 | 20 |
| Osa09LNT0434400.1 | osa-miR5489 | Translation | 4.5 | 15.803 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0434400.1 | 9 | apd9 | Others | Others | CDO590 | G103 |
| Osa09LNT0434400.1 | 9 | nan | Morphological trait | Root | C711 | G103 |
| Osa09LNT0434400.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | R1164 | R79 |
| Osa09LNT0434400.1 | 9 | nan | Morphological trait | Shoot/Seedling | RG553 | RZ206 |
| Osa09LNT0434400.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0434400.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0434400.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)