© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0040200.1
CGGAGTAGTTGATAACCAAACATTAGTACATATCACTAGTTCACTACAGGCAATTCCCAGTACGTGACTGTAGTAATATGCACGAGCGGTTACATGGACAAATCGGTAATATGTAATTCTGGTGTTACACACCAGATGAGCTAAGCATGTTTACGAGTCACGACGCTTCAGTGGCCTTTCCTTCTCTCTCTTTCTTTTTTGAAGGATCAGACTTAGATTTTTCTCCCATTGCAGTACAAGAGTGACATTGCAAGCACAAAGAAACAGCGGATTACTAACTCCCCCCAAAAAATAGCATTACGATTAAGGACTAGACAAAAACTAATCAGTAAAATGAGAGAATATTTACTCACGTAACATAACATGCATGCTAAACATCCATGTCCTTTAGATCAGAGATTAGTTTCATAAATAATGCAAATGGCCGAAGGTTCAGATGTTTAATGTTTTCTGATGAGCAACCGAAGTTGAAGTCTTCATCAACTCCCTAATAGCCATTGTAGCATAAGATGATGCTGGTAGAGTAAATGCTAATTTTATGGCCAGTTTCTCCAACATATCCGAGCTGCCAATAGATTTGGCTTCTGCTACTACTAGGCTAGCTCCATTTATTGATTCAGAGGCATCCAATGAAGCTTCCAGCCCAGAATCATGTGATGTACAGCTGGAAATCCCATCTGATAGTAGTTCATTTACTTCTAATGGCTTCGTTTTAGACAAAACATCTAAATCCGTTTCTACTAAAGGTATTTTCTCATCTGTATAAGTGATGAGATCCCATTCAAAATCAATAGGTCGCTGGATCACCCGACGATAACCTCCTTTCATCCTTGTAATAGAGAAGTCCTCGACACCATGGACACTCTCTCTTAGATTAATGCCATCCTTCATAGCTATTTCATGATAAATTCCAGCAACTTCGTTCCCAGGAAACAATGTTTCTGAACTGCAAATGCAAAATGGTAAGCATAACACTTGAATTAGACAAGCATAAAACATAAAATAAGCGCTCATCACCCAGGCAAAGGGAGGACTACATCCTCAAATGTGTACAGGGACTTTGATAAATCTTCAGAATCCGCTATCTTGACAGACTGGATCATTTCTTCTGGAAGCGTTTCACAACATGCGTTCATTTCAGATGACATAGTTTGACCGTCATCTTCTGAAGTAGCCTTTAAAGCTCCTTGTTCAAAAGGGGCTTCCTTTTTGTAAACCAAGTCACCTTCTACAACTCGTGAAATACTTTTGAACTCTCATACTTGCAGCATGGTTCCATAAGTAACTCTGGTAACTATGCACATACATCAGTCTCAGTGTTCTAGGTATAGCCATTAGTGCTTGTAGATAGTTGCCAGGGTACTTCTTCAAGCGCTGAAGGATAGCCCTCTCTGTTATGAGATATCGAGGGAAGTTCCTAAGTGCCGTGCCAATGTCACCATATTCCTTAAAATGCTCCCTCACTTTATTTATGTTATCACATTCTCCTTCCCTTGGACCAAGAATCAATTGAACAGCATTTCTCCACTCTCCTCTAAGCAAAGCAACACCAACTTGGTGATTCGGCACTGAACCACTACCAAAGCGCTAAGCACACAAACGAAGATTTTTTTACTAGCCATAACACAACAAAAAATAGTTTGAACCACAGGAAAGTGAACAGGGCAATGTTGACCTTTTCACACCACACTTGGTTTGCATTTGCTGAGATAACACTGTATGTTCCAAAAGAGCAGGGGCTTTTGACACCCTCTTTTTTCTTTTAGAGCAATAGTTGCAACAGGTTCGGTGCGTTCCAGCAAATGACCACGATTTCATATAGCCTATCAGCATGGTATTTATTTATTGTGTCTCAGCAAATGCAAAACAAGTGCAGTATCCAGGAGCCTGCTTTAGAAAAGAGAGAAGAGTTGAATTATTGTACTTGTAGACCATAATAATTGATAAATCCATTTGTTATTAATCCATCAAGAGCAGCCTTAATCACATCTTCAGACTCTGTAACAACACTCCTCAAGGTAATTGTAAATCGGTTCCCCATCAGTTGACCAAGAGCAAGACCTTCCTTCACATAACTGAAGTCTCCAACTTTAATGCCAATGAGCTTACTGTTAAGAGCAACCAACCTACTAGCTTGCACCTTGAAAACCGTGACCTGTTGAGTTGTAACAGCGCGTTTATCCTTTGTTCCTGCAAACCCGAATGATCGAGGCTGAAGCCCTAGCATCTTGCCTATCTTTCCTAGTGCCTCTTGGGTGTCCTTGTTCTCCTTGTAAAGATGAAACCTTATGAACTTCCCTAGATGGTCAGGCCAGATTATAGATCCTCTACTATCAAATGGCTTGTCATCTCTCCAGCCCGAACTTCCCGTGCCTTTCCTATTCCTCCCCCTCCCATCAACATCCCTCCGTTCGCGTCGCCCCGGCTTCAACCTCACCCTGATGCACCTCTGGATTCCATCGCTGTGCTCAACTGTATCTGTAAGCAAGGCCTCGAAGTTCCTCTTGAAGAAATCATGAACTTCCGAGCGATGAGTCTTGTCGGCATCAGCAGAGAGAATGATCGGTGAGACATCGCTGTCGCCTCCCTCTGAAACCCTCTCCAGAAACCCCCTCAATGCCTCACAGTCCGCGTCGCCGCAGAGCAGCCGGAACGATTCCAGCGCCTGTGCTTCGTCCATGCCGCCTTCCTTCGCATCTACACACTCGCCGTCGGGGAGGTCGAAGGAGGTGAGGCGGACGAGGGAGCCGTCGAGGGCGACCTCGTGGACGACGAAGTCGGAGTAGCGCTGCTTGAGGGCGCCGCGGAAGCCCGGGAGGGCGGAGGCGAAGAGGGAGATGCCGACGTCGGGCTCGGACAGTGGGGCGCGGCGCGCGGCGGGCGGCGGGGCTACGGTGCGGTGGCTGGCGACGCGGCGGGGAGCGAGGCGAGAGGAGGGGGGTTTTGGGTAGGCGAGAGGGGATAAGAGAGGGCTTAGGAGATGGCGGCCTCGCATTCGGGCGGCGCACGGTGAGACAATGGCCGACGGCCGCCGGGTGGATGGTAGGGGCCCGGACGCGCGGCGGCGACGGTGGCGGTGGCGGCGGCGGCGTCGTTCGCCGGGGAGGGGAAGGCGCCGGTGGCGGCAAAATCTTCTCCGGCGCGCGCCGTTCGACGGTGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0040200.1 | 1 | 32666813 | T | A |
| Osa01LNT0040200.1 | 1 | 32661501 | G | A |
| Osa01LNT0040200.1 | 1 | 32661783 | A | G |
| Osa01LNT0040200.1 | 1 | 32662910 | T | G |
| Osa01LNT0040200.1 | 1 | 32663353 | A | T |
| Osa01LNT0040200.1 | 1 | 32664639 | C | G |
| Osa01LNT0040200.1 | 1 | 32664792 | G | A |
| Osa01LNT0040200.1 | 1 | 32666225 | T | C |
| Osa01LNT0040200.1 | 1 | 32664784 | T | A |
| Osa01LNT0040200.1 | 1 | 32661536 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0040200.1 | osa-miR5528 | Cleavage | 3.5 | 13.502 | 1 | 21 |
| Osa01LNT0040200.1 | osa-miR417 | Cleavage | 4.5 | 15.928 | 1 | 21 |
| Osa01LNT0040200.1 | osa-miR1440a | Translation | 4.5 | 15.049 | 1 | 20 |
| Osa01LNT0040200.1 | osa-miR2919 | Cleavage | 4.0 | 17.22 | 1 | 19 |
| Osa01LNT0040200.1 | osa-miR5491 | Translation | 3.5 | 15.479 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0040200.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0040200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0040200.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0040200.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0040200.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Osa01LNT0040200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0040200.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)