© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0435700.1
GCGGTGCCCCCGCCGACGACAATGTAGTCGTATGTCTCGTGGCGCATCGCTGGGAAGCTGCTCGCCTTCTGGAGGGGTCTGGACCTCTTGGCAGTTGGCATTGTACCTCCTAGGACTGGATGAGAGAGGGAGCACTGGCCTGGTACAACTGGGATTTATGGACTTCATCAACCAACCAACCGTAGCAAGGCTGCTCTGAAGATTGGAAGAAAGGGACCTATGCCTCTCAAGCACTTTAAGGAGAGGGAGAGCCAAGGACAATATGACCTGTGAAGAACCAGAAAGAGCCTTCACATCACACGGTTACATCTGGATCGAAAAGAGACGCCCTAACAACCTACTCGCAGGCAACCTGGGATTATTTAAAGGGCTGTCTGAGCTGCCGAAGCAGAGTGGTGCACCTAGGGGTCACAAGACTCACATCCTTGTCCGGGCAGTTCGCTGATCGCCGGACGGCTCCTTAATTTTCTCAACAGAAGCCTTTAATCTGTATTCAAATGGCTCTAAATGGATCCGCAGCCAAACATTTCCAAGATACAATCGTAACTCTATTGGGTGGATTCTGGAATCTCGATGAAATGGAGTTAGATCTGGGAGAAGAATCAGTACTGGAACTATGTCAAATGGGGCAACCTGACCAGTGACTAGTGACCACTGCTACGAGCTGGAACCTGTTAAATTTCCATGCCCATCCATCCATATGATATATTTCCCACTCACCACCAGTTTTTCTGAACCTGATGCAATTATGCAAGTAATCAAGCAATCAACCCACCGGTGAAGATGTTGGTCAATGACTGAAACTAGGAGGCTAAGGTTATGTCATCAAGATGCTCCATCTCCCTGGAATCCCAGCATTTTCATCCTCTACCATTTCAATACAACCACATGGAAATTGTGCTAGAATCATCATCATCACCATGAAACAAAGGAAAAATGGGGCGATCTTGCTACTGTTTCAAGTTTAAGGCGGCGGCAGATCAGCGCAGTCCTCCTGTCTCTTCACAGATGATTGGCTGGAAAAACAAATTCTGCATCTCATCTGGTGGTTGCGTCTCAACGGAGCTGACGTGATGGTCTGACAAAGATGTTTCAAACCATAAATTAGTCACTGACAAAGCCTGCTTCTGTTGTTCGCCGAAATTCTTTTAGAAGACTCAGGCCCTGTTTAGATGGGACTAAAACTTTTAAGTCCCTATTACATCGGATGTTTGAAAATTAATTATAAATATTAAACGTAGACTATTAATAAAACCCATCCATAATCTTGGACTAATTTGCGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0435700.1 | 9 | 11925640 | A | G |
| Osa09LNT0435700.1 | 9 | 11926397 | T | C |
| Osa09LNT0435700.1 | 9 | 11926412 | A | G |
| Osa09LNT0435700.1 | 9 | 11926484 | G | A |
| Osa09LNT0435700.1 | 9 | 11926584 | G | A |
| Osa09LNT0435700.1 | 9 | 11926590 | A | G |
| Osa09LNT0435700.1 | 9 | 11926613 | A | G |
| Osa09LNT0435700.1 | 9 | 11926629 | A | G |
| Osa09LNT0435700.1 | 9 | 11926893 | A | G |
| Osa09LNT0435700.1 | 9 | 11926918 | A | G |
| Osa09LNT0435700.1 | 9 | 11926969 | A | G |
| Osa09LNT0435700.1 | 9 | 11927170 | C | G |
| Osa09LNT0435700.1 | 9 | 11929124 | G | A |
| Osa09LNT0435700.1 | 9 | 11929292 | G | A |
| Osa09LNT0435700.1 | 9 | 11929399 | C | A |
| Osa09LNT0435700.1 | 9 | 11929595 | A | C |
| Osa09LNT0435700.1 | 9 | 11926990 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0435700.1 | osa-miR5531 | Translation | 5.0 | 23.08 | 1 | 22 |
| Osa09LNT0435700.1 | osa-miR166i-3p | Cleavage | 4.5 | 18.408 | 1 | 21 |
| Osa09LNT0435700.1 | osa-miR1865-5p | Cleavage | 4.0 | 12.872 | 1 | 24 |
| Osa09LNT0435700.1 | osa-miR3979-5p | Translation | 4.0 | 16.863 | 1 | 20 |
| Osa09LNT0435700.1 | osa-miR5148a | Cleavage | 4.5 | 12.102 | 1 | 24 |
| Osa09LNT0435700.1 | osa-miR5148b | Cleavage | 4.5 | 12.102 | 1 | 24 |
| Osa09LNT0435700.1 | osa-miR5148c | Cleavage | 4.5 | 12.102 | 1 | 24 |
| Osa09LNT0435700.1 | osa-miR5503 | Translation | 5.0 | 10.848 | 1 | 22 |
| Osa09LNT0435700.1 | osa-miR5503 | Cleavage | 4.5 | 24.117 | 1 | 22 |
| Osa09LNT0435700.1 | osa-miR2275d | Cleavage | 4.5 | 16.6 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0435700.1 | 9 | nan | Morphological trait | Shoot/Seedling | RG553 | RZ206 |
| Osa09LNT0435700.1 | 9 | qLG-9 | Physiological trait | Germination/dormancy | G103 | R1751 |
| Osa09LNT0435700.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0435700.1 | 9 | qPC9 | Physiological trait | Eating quality | RM4413 | RM1896 |
| Osa09LNT0435700.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0435700.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | R1164 | R79 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)