© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0436300.1
CTGATACTTATATTTATAGTTAATTATTTTTCTAGTGTTAGAGAATATATCCGTAGACGTCTATATTGTTTTACCCTGGAACGCTGTTTTACACAGCCCAGTTCCCTGAAACCCTCTGGACCTTGGTGGTTAGCCTGTGGCTGTCCGGATGATGCCTTGTGCCATGAAAAAATGGAGCACTGTGGCATCACTATTATGACCCCATCACTCCATCAGTACTAACATGCACTTTATACGGCTAATGTTTGGATCAAAGCTAACAATTCGGTGACCCTCACTTCGTCACCGATGCAAGAAAACATCCTTTTCCTCGCCAATGAATCATGGCAGAAGAAGAGCACCACATTTCCAAAGTACTTTTTCCAACAGACATACATATACATGATGCAAATCTAAAGTTCTAAACTAGACTCTTAAAAGAGAATGTTGGATTCAAGCCAAGAGCTGTACATTCATGTCTTTCCTTCCTCCTGCAAGGCTCTTGCAGGAGCCTCTCTTTTCTTTTTTTGTTTTTACCCCCAATCAGAATTGCCTGCAAGTTCATCAAAACTACTAGTTTTTGTTTCGTTGATGGCGATGCTTCATGGTGGCTGATTACCTGATTGCGAACCCTGGGCAGTTTTCATCGTTTTCGCGATGACGAGTAGTAGTCCTTGGTGATTTGACAATATCATGCTGACCGCGTTTTCGCTGCTAATAGATTCAATGTAACAGATCATGGTTCAGCTGACAACCTCAAGTATATCCCTGAATGTTACTTGACTCTGGCTGATCACCTCCCTTCGGGGTGTAATGGCGGTTACACCCTTGAGTAATCTGATCACCTCACTGCACCCATCCACATAGTACTTCGCTTTGCTAGCCTTCTGGCCAACAGAGCAGGCAAAGACATCTGGAGCAGTAGGAAACACAGAACGTGAGACGGCTTCATTGATGCTCTCAAACATGTCCTCGTCCGATCGATCGTTACCAATGCACATCAGAAAATCCGGTGCGTTTTCGTTGTTGATTACCGTCCGAATGACTGTGTCCACAGCAATCCCCTTGCTAACACCCTGGGGCTTAACTTCTACGATTTGATGACCACGTTTAACCACAACAGGTTCATTTGCCAGCACCCTCTCAAGATGACTCACTAGCTCCTTCGCCTGGCATGAACCGAAGTCATGATCTGCATCCTGATAATGCCAAACTAGCCCACTCTCCTTTGTCTCTATGGCAGACCCATCGGTTGTTTCCTTGTATACTTCCATGATAGGCTCGGCGATGTTCTTCCATTCACAATCTTGAGCTGAGGAGCTTGTTTCCCATTCACCTTCTTTGTTCCACCTGATAAAATAGCCATGTTCAGCTGCAATACCAAGCTTATCACATGAAGCAAACCACTCACTTAGGGTAGTACGATCTCTTCCGCTGACTATGAACACACAGTTCTTTGGATCATTGCACAAGCTTGTAAGGATAGAAATGACTTCTGCACTTGGAACTTTGTTGACTGATGACTGGGGGACAAGGGTGCCATCATAATCCATAAATATCAGCCTTCTATTAGTCTTCTTATAAGAAGAAGCAAAGTGTTCCAAAGATAGCCTTCTAAATCCAGGAGAAAGAGCAATGACTCTAAAATTCAAACCAAACCCAGTGGTCCAACACCTTCGGCTATAGTGATCCTTGCACGCTCTATCTAGATCTTGGGAAAAACTGCGCGCCCAGTAAGCAACGTCATGAGTTTTGACGTAGCGATAATGCTTATCATGACGCAATTTCCTCTCCGATTGAGTCAAATCCATTGCTTTATATAATGCATCAGCTACATCTTCAATACTCCAAGGATTTACCCTGAAAGCACCACTAAGTGATGGGGAGCAACCAACAAACTCAGACACAATTAGTGTGCTTGTGTGATGTGAGCTCTTATCAACACCTCTGAGCTTATCAATCTCCTCATTTCCCTGCCTGCAGACAGTATACTCATATGGTATCAAGTTCATCCCATCCCTCACAGCATTTACAATACAGCAATCAGATGCAGCATAGTATGCAATCTTCTCATAAGAAGGTATGGGGTAGTCGATAAGGATGACAGGCTTGTACTCAGCAGAACCATACTTAATGTTTATCCTTTCAGCTACAGAGACGGCTTCATTTATTGCTTCCTCCACATCTTTTCCAGTGCTTCTTGCAGGATTTATAATCTGCACAAGGACAACCTTCCCTCTTAGCTTTGGAGTTCTCTCCAAAAGAAATTCCAAGCCAAGCAATTTTAGACTGATCCCTTTGAAGATATCCATATCATCTACACCCAACATCACCATCTTACCCTTATATCTTTGCTCAATTTCTTGAACCTTGCTAATTGTGGCAGGCAGCCTCAACACAGACTCAAGACGACCAACATGTACACCCACAGCAAGGATCTTGAGGCTCACCGTACGGCCAAAGTACTCTATACCGATGTGACCACGTTTTGACTCGTAATTAAGGCCTAACAATCTGCTGCAACATGAAAGGAAGTGGCGGGCATAGTCAAATGTTTGAAAGCCAATGAGATCAGCATTCAGAAGAGACTTCAAAATTTCATCTCTTACTGGCAGTGTCCTATAGATTTCAGAGGAGGGAAATGGACTGTGAAGGAAGAAACCAATTTTGATGCGATGAAGCTTTTTTCTTAAAAAGGTTGGGAGAAGCATGAGGTGATAATCATGAACCCACACACAGTCATCATCTGAATTGATGGCCTCCATAACTTTGTCACCAAATATTTTGTTTGCCCGAACATAGGCTTGAAATAGAGAGCGGTCAAAGAGCTCGCCTTTGTCGAGGCAAATAGGAAGCATATAATGGAAAAGTGGCCATAATTGTTGTTTACAGAATCCATGATAGAACTGCTGCTGGAGGTCAGCTGGGAGGAAAGTAGGTATGCATTTGTATTCTCTGAAAAGTTTCTGTGAAAGTTGATCTTGCTCACCAGGATCAACTTCAGCGTTCAAGCTACCCACATAAACAACTTCGCTCTCCATTGGAAATCCATCTTTAAGTTGAACAAGAAGTTGATTGTCATCCATTGAGAAGGACCACTGTCCAGTAGCTTCATCTTTGGTACAGTTTAGTGGAAGAAAGTTGGAGACGATTATTTTCCTTACACAGCAAGATGCAGGACCAACTGAATCATCAGCATTACTTGTATCCCAATCAGGATTAGATGTGATGCTTGGGGAAGTCACAAAACGAGGAAGCGATCTAAATGGTTGCTGAAAGTCAAACACATCTTCACCACTCATATCTAGAAGATTTGTATATGACTTTGAAACCATGATTCCACAACCTCCACCGCGGCAGATAGATTCAGCGCATCCAGATGAGATGGCGGCGTTTCTTGGCTGCTTCTTCTGCTTCCTTCCTCGAGATTTTCTTTGCCTCCTGCTTCTGCTTCTGCTCCCACCCACCACCACCACTATCAGCAGCAACAGCAGCAGCAGCCAAACCTCGAATCGAGTAGAGGAAGTAGGAGAAGAAGAGACAGCAAGAACACAGACAAATGTGGTGGAGTTGAGAGAGAGAGAGAGAGAGAGAGGAGAAGAAATGTTTGTAAGACTCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0436300.1 | 9 | 12649740 | A | G |
| Osa09LNT0436300.1 | 9 | 12644239 | C | A |
| Osa09LNT0436300.1 | 9 | 12644325 | A | C |
| Osa09LNT0436300.1 | 9 | 12644343 | C | A |
| Osa09LNT0436300.1 | 9 | 12645688 | G | A |
| Osa09LNT0436300.1 | 9 | 12645942 | T | C |
| Osa09LNT0436300.1 | 9 | 12645944 | T | C |
| Osa09LNT0436300.1 | 9 | 12646310 | A | G |
| Osa09LNT0436300.1 | 9 | 12648014 | A | G |
| Osa09LNT0436300.1 | 9 | 12648314 | T | A |
| Osa09LNT0436300.1 | 9 | 12647451 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0436300.1 | osa-miR156a | Cleavage | 4.5 | 14.493 | 1 | 20 |
| Osa09LNT0436300.1 | osa-miR156b-5p | Cleavage | 4.5 | 14.493 | 1 | 20 |
| Osa09LNT0436300.1 | osa-miR156b-3p | Cleavage | 4.5 | 10.06 | 1 | 21 |
| Osa09LNT0436300.1 | osa-miR156c-5p | Cleavage | 4.5 | 14.493 | 1 | 20 |
| Osa09LNT0436300.1 | osa-miR156d | Cleavage | 4.5 | 14.493 | 1 | 20 |
| Osa09LNT0436300.1 | osa-miR156e | Cleavage | 4.5 | 14.493 | 1 | 20 |
| Osa09LNT0436300.1 | osa-miR156f-5p | Cleavage | 4.5 | 14.493 | 1 | 20 |
| Osa09LNT0436300.1 | osa-miR156g-5p | Cleavage | 4.5 | 14.493 | 1 | 20 |
| Osa09LNT0436300.1 | osa-miR156h-5p | Cleavage | 4.5 | 14.493 | 1 | 20 |
| Osa09LNT0436300.1 | osa-miR156i | Cleavage | 4.5 | 14.493 | 1 | 20 |
| Osa09LNT0436300.1 | osa-miR156j-5p | Cleavage | 4.5 | 14.493 | 1 | 20 |
| Osa09LNT0436300.1 | osa-miR528-3p | Cleavage | 4.5 | 15.284 | 1 | 21 |
| Osa09LNT0436300.1 | osa-miR815a | Cleavage | 2.5 | 11.679 | 1 | 21 |
| Osa09LNT0436300.1 | osa-miR815b | Cleavage | 2.5 | 11.679 | 1 | 21 |
| Osa09LNT0436300.1 | osa-miR815c | Cleavage | 2.5 | 11.679 | 1 | 21 |
| Osa09LNT0436300.1 | osa-miR1849 | Translation | 5.0 | 15.252 | 1 | 21 |
| Osa09LNT0436300.1 | osa-miR1861c | Cleavage | 5.0 | 10.574 | 1 | 22 |
| Osa09LNT0436300.1 | osa-miR2875 | Cleavage | 4.5 | 13.752 | 1 | 24 |
| Osa09LNT0436300.1 | osa-miR1863b.2 | Cleavage | 5.0 | 10.601 | 1 | 23 |
| Osa09LNT0436300.1 | osa-miR5501 | Cleavage | 5.0 | 18.444 | 1 | 21 |
| Osa09LNT0436300.1 | osa-miR530-3p | Cleavage | 4.0 | 19.108 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0436300.1 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Osa09LNT0436300.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0436300.1 | 9 | qLG-9 | Physiological trait | Germination/dormancy | G103 | R1751 |
| Osa09LNT0436300.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)