© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0040300.3
ACTAATCGTTGGTATTTGTTTGATTGGAAGGTATTACAAGTACGCTGTTAAATCGTTTGTATTTGTTTGAATGGAAGGTGGAGTACCTCTTACCTTCCAAACGGTGAAACATTTCCAAAAAGAAAAGGTGAACCCGCCACCCGAGCGAAGATCACTGCTTTTTAGTACTACTGTAAGTACCTCCATTTTGGAACGGAGAGACCAACTCCGTCCCAAAATATAGCTTTTGGCTGGGTAGTACCGTTATAAGTTCAAAGAACCAAGGAATTGCCTGAAAAATAACATCATTCCGAGGGGAAGTTTGCTCACTGACCCTTTGTAAGCACCACGAGGCCCGCCAATGTAACCTTGAACCAAAACCACGGCACAAAATTTTCTGGTTAAGACAAACCCTAGGATTTACATGCTTCCCACATGCTACATGATCCATGAATTGGCATGTACAAGTGCATTACTTTGGTCGGTCAGCATGCACCCCAATATATTGGCGCAGCACACTCTGGAATACCTGAAAGGAAAACATTTCTTTTCCATTAAGAAGTGCATCCATCGCAGCATACTGGTCATCAAACACGCTGTAGAATGTCTTGTAAAACTCACTCTGTTGCTCTTTTGTCGCTTGTTGGTCCATCTCGTCAAACTTCCTTGTCAGTATCTCTGCTCCTATTGGTCCAAGCATGTTGAGGACAAGAGCTTCTAGAGTCCTTGGGAAAGTACGCGCCATGGCAAGCAGCATACTCTGCAATTCAAGCGGTTTGAGTGGTAAAATTATTTTTGCAATAGGATCTTTCTCCAAGAGAGATGAATCATCTGCAGCAATCTTCTTACTTCCATTGCTTTGCTTGCAATATGCATCCTGAGATGTAGGTTCTGTTATTTCGTTTTGGCTAACCATTTCAGCACTGTTGTGAACCAGTGAGATGAGTTCATAAAGTGCTTGGAGGGTGGACGGTTCCAGAGTTTGCAGTGGTGAATCTTTTTTGTCAGATGAATCAGAATTAACCTGCTTCTGCTTCAATTGCTCAGGACCTCCTGATTCTTCATCTGTAGGCTGACAAACAGTTGTACCTTTTGAACAAGAAACAGAATTCTCCTGCACCATTTTGTTCATCTCCTTATCCACCAATCTTTACTACGAATCATGTTTAGATGCAGACACCCGCAAGATGCCAAAACAACAGGAAACCAGTTAGAGTAGGATTAAAAACAGGTCAAGTGAAAAAACATCCACACTAAAGGCTAGACATTTGGAAATGAATGAATCTCTATATCCTTCAGTTGAACAACCACATATCCTGTTATTATTTTAAAAGGTGGCAGCTGGCACAGAGTAAGGGATAGCAGTTGTCTAGACTATGGTAACATCAGCCAAATATTCTTTTTGTCAAAGAGCAATTTAGTTAAATCCTTCTAATGTAGAGTCGTATTAATTGTAATGTCAAATATGCTTGTGTCACATTGTGACTACCTATTTAGTACATACGCGTTACATGCCAATGACTAGGATTGGTAAAATGAAAGGCTTATACAGTATATTTCTACACCAAATCATATATAGACGTTTCACTGATGGAAGTGCAGTGCATATTGAAGAAAACAAATATAACTGAAGAAAATACTAACACCTGCTCAGGATTCGTCGCAGATAGTAGGCATCCATATGTTCTAACATTTCATTCATTATTCTTGACTTCCACCAAAAGTTAATTGCTATTGTCAAATCATCACTGTCAACTTGATGATACCATCCTTCTGGTATGAAAAGAGCATCACCACAATTTAGAATGACTCTCTCAGAGTATTCCTTCATGTATCTTGCTCTTGTGTACCTTGAATAATCTGGTTCCTCGATGCTGACAGAACTATGGTTGGAGGCCTCCCCATACACAGGCATCGGGTACAGATATGGGGATGATGAGGGAGGCCACAAAGTTACTCCTGAATGTCCTCTTTCAAAACTTCCAGTGAACATCTCTCTTTGTTCTCAGTGTTCAGAATTGATACTTGTGCTAAATAGACTTGGTCACAACTCTCTAAGCTGCTCGAGCACCCCTCCTCTGAAGAAGCGGGCTCCTTGAGGATTTCTTGAGCTTTGGGTGAGTCACTGGAGGCATTCGGACACCTCAGGTAAGATTTGCACGAGTTCATGAATTTGGAGAATGGAACAAGCACCCTCTCATGGCTTCTAAGATCCCCATAGAACACATGCCCTGTGCTCGACATCATAGCTTCCACATCAACATCAGGTCCAACCTTTTCCCGCAAATAGTCAAGGCCGCCACGGCGAGGATCCCACCGAGAGGAGGCCGTCCAATCCTTCACCACGCCACGAAACACCTGATGGAAGCAGAAAGGGGAGGAGCGGTAAAAGGGAAGGGAAGGGAAGTGGGGAGCTTCGAGAGGATTCGGGGCGTGGAGAGGCTAGGCTCTCTACCGCGGGGGCGTTCCTGGGCTCGACGGCGGCCGCGAACTCGTCGGCAGAAGGCGGCGACGCGAACCGCGCGGCGCGGAGGCCGGCGTCCAGCCGCGCGCCCACGAACTCGCCGCCGCCGGCGTCGTCGTCCTCCGCTCGCATCGCTTCGCCGTCTCCCAGCACGAAGCAGCAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0040300.3 | 1 | 32678464 | C | G |
| Osa01LNT0040300.3 | 1 | 32676123 | T | C |
| Osa01LNT0040300.3 | 1 | 32676294 | T | C |
| Osa01LNT0040300.3 | 1 | 32676459 | T | G |
| Osa01LNT0040300.3 | 1 | 32676901 | A | C |
| Osa01LNT0040300.3 | 1 | 32677364 | C | T |
| Osa01LNT0040300.3 | 1 | 32677929 | A | T |
| Osa01LNT0040300.3 | 1 | 32678402 | T | A |
| Osa01LNT0040300.3 | 1 | 32678636 | C | T |
| Osa01LNT0040300.3 | 1 | 32679817 | C | A |
| Osa01LNT0040300.3 | 1 | 32680598 | A | C |
| Osa01LNT0040300.3 | 1 | 32680749 | A | T |
| Osa01LNT0040300.3 | 1 | 32678665 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0040300.3 | osa-miR6245 | Cleavage | 5.0 | 14.876 | 1 | 21 |
| Osa01LNT0040300.3 | osa-miR156a | Cleavage | 4.0 | 17.99 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR156b-5p | Cleavage | 4.0 | 17.99 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR156c-5p | Cleavage | 4.0 | 17.99 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR156d | Cleavage | 4.0 | 17.99 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR156e | Cleavage | 4.0 | 17.99 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR156f-5p | Cleavage | 4.0 | 17.99 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR156g-5p | Cleavage | 4.0 | 17.99 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR156h-5p | Cleavage | 4.0 | 17.99 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR156h-3p | Cleavage | 4.0 | 19.145 | 1 | 22 |
| Osa01LNT0040300.3 | osa-miR156i | Cleavage | 4.0 | 17.99 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR156j-5p | Cleavage | 4.0 | 17.99 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR171a | Translation | 5.0 | 17.958 | 1 | 21 |
| Osa01LNT0040300.3 | osa-miR399e | Cleavage | 4.5 | 17.99 | 1 | 21 |
| Osa01LNT0040300.3 | osa-miR399f | Cleavage | 4.5 | 17.99 | 1 | 21 |
| Osa01LNT0040300.3 | osa-miR399g | Cleavage | 4.5 | 17.99 | 1 | 21 |
| Osa01LNT0040300.3 | osa-miR171i-3p | Translation | 5.0 | 17.958 | 1 | 21 |
| Osa01LNT0040300.3 | osa-miR1438 | Cleavage | 4.0 | 15.172 | 1 | 22 |
| Osa01LNT0040300.3 | osa-miR1874-5p | Translation | 5.0 | 24.807 | 1 | 24 |
| Osa01LNT0040300.3 | osa-miR2095-3p | Translation | 4.0 | 16.57 | 1 | 20 |
| Osa01LNT0040300.3 | osa-miR2118a | Translation | 4.5 | 21.91 | 1 | 22 |
| Osa01LNT0040300.3 | osa-miR156l-3p | Cleavage | 4.0 | 19.145 | 1 | 22 |
| Osa01LNT0040300.3 | osa-miR2104 | Translation | 2.0 | 22.886 | 1 | 22 |
| Osa01LNT0040300.3 | osa-miR156f-3p | Cleavage | 4.0 | 19.145 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0040300.3 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0040300.3 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0040300.3 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0040300.3 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Osa01LNT0040300.3 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0040300.3 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0040300.3 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)