© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0040500.1
TTGGCAGCCAGCATAACTTTTTTTATTCTTTCAGGAAGTATTTATATTCAGCAGCAGCAGTAGTACAAATTGTACGATTGCACTGCACTGTGACTGTTAGTAGCTTCCTATTTACAGCAGATAGGATGAGCAATAAGTAGTTAACAACTCGTGCAACTGCTCATCCGATCGTAAAAATCAAATCGTCAAATCGTGTACTTAAAATACAATACAAGCTGCTTACGCCACGGCACGAAACGGCAGCCTGATTTCTCTCTCAATATACCATCAACCGTGGGGATAGCAATCCCAGCAGTACAGTGCAGAACTTAATTAGCCTGACCGGTAGTGATGATGCTTGCATCGCTGGCGTTTTCAGACCAGAGGCAAGCAAGAGAAAAACCTCTGTAATTGATGTTGGCATCTGTCATCTGGAGCTGGGGCGTCTGTGCCTTTTCCGTTTCAAAAACGAAGCAGCTCTCTTTCTCGTAGCTTCGTATTGAGTTCTTCTTGCGAAGGCAGTTTCCAGCCACTCTTCATGGCAGCTGACCACCATGCCTTCAGCTCATCCTGGTGGAAGTCATGGTTGGATACAAAGCGAGAATCTACTTGGCAAGTTGAATTCCTGATGGTCACAGAAAGGCGATTCTTATCCAGTACTCCATTTATCCTGGCAACATGATATCCAGTGCCACCCAATGCTTCCTCCCATTTACCAAATCGTAGACGCAAGAAAAAGCCATCTAAGGTGGTGTGCATAACTGGTGACCTCATCCATCTTATTATATCGGAGCGAGACAAACGGAGCCTCTGCAAGGCTCCAAAAACTACACTTGCTTCGTCATAAACATCATTGGGCACAATACCATAAGGTACCATTTGTTTGTTATCTGGCTGATTCTCCATGGAATTTGGTGCTCCTTCTTTATTTTGTAGTCTCTTCCGATCAATTTCTTCAATATATGTGTTTGTTTCTAAATTACATTTAGGGGGTACCACCTTTCCATCAGAGCTCCCTTCACAATTCTGATTTTCATGCTTAGACAAAACCTTTTCTCCTAATTCTTTGTCATTCCCAGGAGATAATTGTTCCTTACCTTTGTCACCTGTCCATAAAACTATTCTTCCTTCTCCACCAGAAGACTTGTGAGTTTTTTGTCCAGATTCTTGCTCATCATGACTATTGTAACTAACAACAAAAGAACTTGTTTTGTGATTACGCCCTTTGGGTGTTCCATGGTCACATGTAATGGCCACATGTACTGCTGATGTATTTGCATGTCTAAGCGCATCCAATCTTTTAGCAAAAATTGATGCCATTGTTTCTGATGGTTTATTTTCGTCTTGAGGCGCCGCACATTTGCTACTTGTAGTTTCATTGTCACTTCCTTTGCTAGTAAAGTATTGTGAATTGTTTAATTCCTTCTCCACATTAAAATCCTGCGGTGATGAACTATCACCTAAACCTTTTGGGTTAGCAGAACAAAAATCAGTTTCTTCATCACAGCGCGTTGTGTCCATCACTTTCATGGGTGTTTTTGGCAAAAGTCTACTTACCCATAAGCTTTCTGAGAAATCATCTTTATGTCCCGATGCAGCATTTGAAGAGCTTCCATGGAACCCATTCTGATTTCTTTCTGCTCTTAAAGGGAAAATTCCCATTTGATTTTGAAATGCCCCTCTGTCACCATAAGAATCCATTTGAATTCTGCCCGCAGCTAAAGTCTCAGTAGCCACATTAAGAGTTTCTCTGCCCATGCTAACTGGTTTGCTACTCTTGAAACCCAGTGTTAGCCTGTTGGCGGTGTAACTGCTTTCTGACTGGTGACAGGTATTTCTTGAAGTTATCATAACATTCTGACTATAAAGAGATTGAAAAAGAGAATTGAAGCCAACGGATTGCAGCGGAACACCACAGTTGTTTTGAAGTGGCACAGGGTTTGTTGGAAATTCCTCTCCTGTAGCTGCTGAAAACTTCTGATTAAGTGGAACAGCAGTAGTTTCATCAAACACCTTTACTCCATTAGTGAGAGTTGACATCCAGTTAAAGAAAGAGCTATCATTTTTGTGGAATAATCCTGAACAAGAACTCTCATTATCTTCCCTTCTACATCTTTTATTTCCAGACGTCATCTCAGCTGCAGAAAATTGACCATGCTTCCGCTTCGGAGCTTTTGTACTTGGGCAGCTCTCTATACTCTCATTGCTGTCATCACCTTCATTTGTGTTGCTAACACAATTACTCATATCATAGATAAGCTTTTCTTTCCCCTTCTCGAGCTTTCTAGGATTACAACCGGATGTCGACTCATGTCTTGCTAAAGGATTAACACCAGATGCTAACTCACATCTAGCAACAGGATTCACAGCAGACACGGACTCACATCTAGCAACAATAAGCCCATCCTTATGCTTTTCCTGCATAGCCTGATCTTGGCTACTGTCATTTCTATTACCTAGCATACTTGTCAATTTGCCAGGCATGTTTTCTGTATTACCAATGCTCCCAAAGGCCGAAGTTGAATGTATATTGTCTGCATTCTTTGGCAAAACAGAGTCCTTCTGACTAATTGCTTTTACTAATCGAGCACGCCAAGCATTAGCTGCCCAAGATCTTTCATCATGGACAGTAGTTGCACAGAAAGCCTGTTTTTCAGCAATAATAGGCATGACCTCTTTTCTGGAAGCTGAACCTAGACTGTGGGAAGTATCGTTGCAGTATCTTGTGGGACAGCTACCCACTTCGTCCTCTTTCTCCAGCTTATCCACACAGAAGTTGTCAGACGTTTCTTTCCCTTCATTCATCACATCCATCCCACCACAGTATTTTGAATCTTGCCCATGTGATCTTATAGAAGTAGATTGTTGAGCATCAGTGTTTCTTATTCTACTTGGGCTAGACATGAATACTCTCGCTGAACTGTCACTGCGAGTTCGTAACTGGGATGGCATCTTTTCTGCGTCTTCTACTGTAGCATCTATGATATGACCACTCTCCCCAGCACCACTCTGTTGAGGTGAAGATATTACTATGCTCAAGGTATCTGCATTCCAATGAAGAGAAGTTTTCCTTGTACTTAAGCTGGACGCTGCAATTTTAATGCTCAAACCCTCATCCGGAGACCACACCAGCTCAGAGACAGATCTCATGCCGAATATTATGACTGCATTTACACCTGCACCTCGGGGAGTAGCGCATCACCACCATCTCATTTCACAGCTTTTCTCCCATCACCGGATCCCCCGCGCGCTCCTCCTCCGTCCTCGATCGGATCACCACCAAACCGGCGCAACAAGGATCACCAAACCGGCGCAAGAAGAAGAAGAAGCCACCATGCACGAGCTAGCAACGGGAGGAAGGAGGCCAAGGAGAGGATCGGAGAGGAAGGAGAAGATCGCATCTGGCGGCGGCCAAGCGAACCAAGCAAGCAGAAGCAGCGTCGCTCGCAGCAATGCGGGGAAGGGAAGGGAATGTGAAGCTAGCTAGGCTTGCATGCGAGCCCCCCGGCCGCGGAACGCGAGGCGGTGGTTGAGCCACGTAGAGGCCGCCTGGGACACAAGCTCGGAGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0040500.1 | 1 | 32761915 | A | G |
| Osa01LNT0040500.1 | 1 | 32762317 | A | G |
| Osa01LNT0040500.1 | 1 | 32763192 | A | G |
| Osa01LNT0040500.1 | 1 | 32763698 | G | T |
| Osa01LNT0040500.1 | 1 | 32760703 | A | G |
| Osa01LNT0040500.1 | 1 | 32762560 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0040500.1 | osa-miR5533 | Cleavage | 3.5 | 20.069 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR5533 | Cleavage | 5.0 | 17.855 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR5799 | Translation | 4.5 | 15.806 | 1 | 24 |
| Osa01LNT0040500.1 | osa-miR5824 | Translation | 5.0 | 14.884 | 1 | 24 |
| Osa01LNT0040500.1 | osa-miR395t | Cleavage | 5.0 | 16.501 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR169f.2 | Cleavage | 4.5 | 14.583 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR1857-5p | Translation | 4.0 | 9.5 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR1858a | Cleavage | 4.0 | 13.697 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR1858b | Cleavage | 4.0 | 13.697 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR1861c | Cleavage | 5.0 | 21.537 | 1 | 22 |
| Osa01LNT0040500.1 | osa-miR1871 | Cleavage | 4.5 | 12.968 | 1 | 24 |
| Osa01LNT0040500.1 | osa-miR2929 | Cleavage | 5.0 | 12.644 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR5147 | Cleavage | 4.0 | 14.591 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR5147 | Translation | 4.5 | 12.491 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR5499 | Cleavage | 4.0 | 12.642 | 1 | 21 |
| Osa01LNT0040500.1 | osa-miR5504 | Translation | 4.5 | 16.128 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0040500.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0040500.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0040500.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0040500.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0040500.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0040500.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0040500.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)