© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0040700.1
TATATGCAAAATCTGGAACTTTCCAACCCGATGAAGTAGTCATAGAACTCTTCTGGACTGACTTGTTAAAATTCCGTTTTATACTCCAACCAAAAAAGAAATAAAGAAGAACCATAAAACTATGAAAGCAGCCGACAGAAAATTTAACGGACACTGGAATGCTTTACACAATGTATTATTTCTTTGCCCCTTTAAAATTAAAAGTTACAACCTGGTGGCCATGGCGACGCTTACATCTGCCACCATGGTCTGTGACAACTTATAGCAGGATTTATTATCAATTGTGTACAGGCATCACCATTGCCCGTTGGCATGGCGATACAGATGTTCTCCATTCACCCTCCCACTCCCTAAATTGGTGTAGTTCCCCATTTGCTGTGAAAATCCATTTGGGTTAACTCCAAGGTTCACTGCTGGATTTGAGAAGTTATGTAGCCAAGGTTTTGAAGTAATCGAGTCCATCCTTCCATTGGAATAAGCATCCAATGTGGAATTTTGCCCTTCTCTTAACCTATAAAGAGCATTCAGCCTGTCATAAGCCATCGGGTAGCCCTCGTCATAGTAATGATCGGCCAAGTTTAACCGGCCAGAACTACTTATGGAAGTCACTTCAGAGTCTACTAAGTTTCCTCTGGAAGAATACGGCAAGCCCAATGTATGATATCCGTGGAGGGTAGGCTCTGCCATACTCCCACTGCTTTGTTCCTCCTCAAGCAAGTCATTGATGATATCAAGGTGTGGAAATTCTTCTCCAACTGGCCCTGGCAATTGGTATGAGACAAGGTTTGTTGGAATCTCCCTCTGGAACTGCCTATATTGAAGCCCCCCAAATTCGCCTTGTTCCCCTGTTCCACTGCATCCTGCTTGCTGATAAGAATTGTCCCTCCAAGATTGAGTATGTGCATCACCCTTGGTCATTTGATGGTAAGGAGAATCATCTTTCCACATGTATTTGTTAGCATTACTATCACCTTTCCATGGGTTCCAGTTATCAATTGCTTCGGACTTTCCTTGCCCAAACATGAAGCCCTGTTTACCTGGTAATTGGCCATTCCTTCCGACCGGAGGTACCATGGCAGATGCTGCTGATGCATACGATGATAGTGGCTGTGAAAGTGCGACGTTTTGGCCAAAAGAAGTTGAATGATCAAGACTTGCTGATGCTGTATCAAGATTACTCTTACCAATGATGGCATTTCGGTAGGTCTGTGCTGTATAACTTGGAACAGAAGGGGATGGTTCATTCCTCGATCGTCCAGCCAGGGTCATTGAGCGGGAAAGCATTGGGGGAACTTGAACTGCTGGCGTAGGTGGTAAAGTTGATCTTGGTACCTGGAACAGAGGAGCACTTGAAGGCCTCGATATTGCAGGAGTTTGGGAAACAGACAGGACTGCAGCCTTTTTGGGAAGAATAGCTTCTCGGGCTTCTGAATTAGACATGGAAGACATTTGCTTTGATACAGGGTCAAGTGACGTAACCTTGTCAACCAGAGGTGCAGGTTGTTTTGGTGTCGGGATGGTTTTAGCAACCTTTCCAACTTGTGGAGCAAGTGATTTTGGGGGCACCAGAATAGCTTTAGCGACTTTCTCACCCTGTGTAGCAGGTGATTTTGAGGGAGTCGGAACAGCTATAGAGACCTTATCAACCTGTGGAGCAGGTGATTTGGTGGGAGCAGCAATAGCTTTAGAGACCCTATCAACCTGTGGTGCCGGTGATCTAGACGGTGCTTGAATAGCGTGACCAACAAGCAGCATGCCTGAAGGAAGGGTAACAGTTTTAACAACTTGCGGTGGATTTGAGGTGATTGGAGTATCAATTTGTGGAGTTGAACATGATACATGATCTTCACACAAAACTGGCTCATCTTTACTCAGGGTGGAAGCAACAGTAGGCACAGGCTCAGTGCTTAGGATGGTGGTTGGTGTTACTGGAGTGACTTCTTTACTGGCACCAAACTTTGAAGGTGATGCATTAATATCAGCATCAGAGATAGTTACTGAAGATTGATCTGGGCTCTTCAGAACCTCTGGAGTCTCTTCTAAAGAATTGGATGAGAGTGATGAGGATGAACCAGTTGCTGACTCAGCTGCTGCCTTCTTTTCCAAATGAGCCTGGAGTAGTTTCCTGCCCTCAATTTCCTTCTCATGTAAACGTTGCCCAAGTTTCCGAAGCCTATCTTTCAAGGTAAGTAGAACAGTCTCTTGATCAAGCTTTGGAGCTGGGCCACAGCCAGATGTATTCCTGTCTGAGCTAGTCGTGCTTGATGGAAGATCATCCACATCCTCGGTAATGTTCATATTGCTTGTGCTCCTGCTGCGAGCTTTCCCTCTGTTGCGTGATATCTGATCTTTACTTTCTAACAAGTTATTTATTTTGCCTTGCGCATTGTTCATAGTAGCAGACTCAGATGAACATGACAATGACTTATTCTCCATAGTAGAATGTTTCTTCTGAATCTCAATTGACCCATCTAAATTGTCTGAAACATCTGAGGCACCTTCTTCAGAGGTATCTACTTTCATGGATATTTGTCCTGCCTGTTTAGAGTCTTCCCTGTCATGAATTGTGTTTTCATCTTGACTTCTTTCTGGAAAATTTGAATCACATTTTTCTTCTCTATCTTTGTCTTTAACCTTACGATTGTTCTTCTTCTGCTTTGCCTGTTTTTTCTTTGCACGTTTATCCTTTTCAGTGGTACTGCCACGCTTCCCCTTCATCTCATTTTCAAGTAGCCAGGCTTCTTCCTCTTCGCGAATAAGCTCCTCTTGCCTCTTCAAAGCAACAGCTTCTTGATAGGCAACCTCAATCCCACTGAATATATGGGATAGTGCAAATGTTTCAATTATCTTCTGACCAAGTTCAGTTAGGCGCCTTTCTTCACGTTCAATCGAAACTTTGTTAACTTCTCCAGAACTGCCATCCTTAGTGCGGCTCTGGGAACATTTGTCATCCTTTGGAGACACAGGCTGACAAGGCAAGGGTTCTAAAGCTGCCCTCTCAAGCAAAGCTATGACATCACCAGCCAAAACAAACATGTCCACATCAACATGGACCATAGGCACTGGCAGCTCTACAAAATCCACTGAGTCTATTATGCCTTTCTTGCTCTTGCTCTTGCTCTGGCACTCGAGCGCCTTCAACCCCGTATACAGAGAGTCCATAACTAACGTTGAAGTTACTTCTTTCTCCACAAAGAAATGTTTCACTATTATTTTCAGTATGACATCACTCTTCTCTGTCGACATGCGATGCCTTGTGCTTTGGTCAATTGCAAGCCAGAAGGCACGGAAACATCTCATTTTGTCCTCAATGAGCTTGCAAAGTTTACTTCTGCGCTCTTCAACAAAGCGTCGGTAAATTTGCTCTATATTGGTCATATAGACACGGAGTAATTCTCGTCGATAAGGGCGATCGAGGCAACGAAATGGGCGATCCACTTTCTCCCTGATAACTTGAACTTGAGCAATGATTTCAAGAACATCATCAACAAGGAAACCATCTTGGATTTTTGACAACTCCATAAATTTTTTCCATCCCCAGTCATGTTCTTTCTTCCAGAATTTGTGCAGGGTGTCTGAATATTTAACTTTCTTTGGATCAAGATTACCCACAGCTATAGTAAACTGTGCGAAATGGCTCCATCCTGGGAGAAGTTTGTCATGATTAGCAACACATAGAAATAATGACAAGTGATTGGAGACATCACATCCTTGAGGGTAAACTAGAATGTACCATTTGTAACCACCAGCTTCAAATGGTTCGCTTTTCATTTCTCTTTTTTTCTCCTTTGAAAAGTTTTCAATTCTCCAAGTATATCGCCCAAATAAATCTGAAGGTCTAGGCCCAGGATCGTCATCTTCACCATCAGAGTCCCAAAAGGGAGGGGCCGTGGAAGGGCTCCCATTCTCGACATGCTCGCAGGACCGACAATCAGACACAGAAGAAGTGGATACACCTTGATTATTGGTCTCTATCAATCCACTTGCCCCTAACCCATTAGTTCTAATAAAATCTTCAACTGTCATATCATGCTCCATCAAATAATCGTAGAACCGTACAGAGCCTGACTTCGGATCTGCGTCGGCAGCCGGTACGCCGGACGCGGATGGCGAGCAGAGAGAGCCGCCGCGTCGGCGGCGGCTGCGGCTGCTGCAGACTCTACTGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGAGACGAAAAGGGAGGAGAGAGAAAAAAAAAGGGGGGGGATGGGTAATATTTTGGATTGGGGAATTTATATTTTCGGCGAGTGGGGCGGAGACGAGGTTGCGCCTTGCGCCGATGTGTTTCTCTTTCTTCCCCGCACGGTCCGTCCGATCCATCACTGTAGGGCTGTAGCCCTTTCTGACGCCGAGATGCGCACCCGTGCGGCGGGCCGCGTATGGAAGTGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0040700.1 | 1 | 32776682 | C | T |
| Osa01LNT0040700.1 | 1 | 32773475 | T | A |
| Osa01LNT0040700.1 | 1 | 32773623 | A | C |
| Osa01LNT0040700.1 | 1 | 32773773 | G | C |
| Osa01LNT0040700.1 | 1 | 32774691 | A | G |
| Osa01LNT0040700.1 | 1 | 32774696 | C | T |
| Osa01LNT0040700.1 | 1 | 32775608 | G | A |
| Osa01LNT0040700.1 | 1 | 32777719 | C | T |
| Osa01LNT0040700.1 | 1 | 32777841 | G | A |
| Osa01LNT0040700.1 | 1 | 32778093 | A | T |
| Osa01LNT0040700.1 | 1 | 32777130 | G | A |
| Osa01LNT0040700.1 | 1 | 32778519 | A | G |
| Osa01LNT0040700.1 | 1 | 32778751 | G | C |
| Osa01LNT0040700.1 | 1 | 32780208 | C | T |
| Osa01LNT0040700.1 | 1 | 32780906 | C | T |
| Osa01LNT0040700.1 | 1 | 32781748 | A | G |
| Osa01LNT0040700.1 | 1 | 32782301 | T | C |
| Osa01LNT0040700.1 | 1 | 32782434 | A | G |
| Osa01LNT0040700.1 | 1 | 32783284 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0040700.1 | osa-miR5525 | Cleavage | 5.0 | 19.821 | 1 | 22 |
| Osa01LNT0040700.1 | osa-miR5543 | Cleavage | 4.0 | 15.511 | 1 | 21 |
| Osa01LNT0040700.1 | osa-miR5179 | Cleavage | 4.5 | 14.375 | 1 | 21 |
| Osa01LNT0040700.1 | osa-miR5512b | Cleavage | 4.5 | 16.429 | 1 | 21 |
| Osa01LNT0040700.1 | osa-miR156a | Cleavage | 5.0 | 12.47 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR156d | Cleavage | 5.0 | 12.47 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR156e | Cleavage | 5.0 | 12.47 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR156i | Cleavage | 5.0 | 12.47 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR396a-3p | Translation | 5.0 | 19.324 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR396b-3p | Translation | 5.0 | 19.324 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR414 | Cleavage | 3.0 | 19.867 | 1 | 21 |
| Osa01LNT0040700.1 | osa-miR1437a | Cleavage | 4.0 | 24.033 | 1 | 22 |
| Osa01LNT0040700.1 | osa-miR2055 | Cleavage | 4.5 | 20.02 | 1 | 21 |
| Osa01LNT0040700.1 | osa-miR2097-5p | Cleavage | 5.0 | 6.078 | 1 | 22 |
| Osa01LNT0040700.1 | osa-miR3979-3p | Cleavage | 4.0 | 15.861 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR5073 | Cleavage | 4.0 | 11.332 | 1 | 23 |
| Osa01LNT0040700.1 | osa-miR5512a | Cleavage | 4.5 | 16.429 | 1 | 21 |
| Osa01LNT0040700.1 | osa-miR5523 | Cleavage | 5.0 | 12.754 | 1 | 22 |
| Osa01LNT0040700.1 | osa-miR156b-5p | Cleavage | 5.0 | 12.47 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR156c-5p | Cleavage | 5.0 | 12.47 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR156f-5p | Cleavage | 5.0 | 12.47 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR156g-5p | Cleavage | 5.0 | 12.47 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR156h-5p | Cleavage | 5.0 | 12.47 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR156j-5p | Cleavage | 5.0 | 12.47 | 1 | 20 |
| Osa01LNT0040700.1 | osa-miR156l-5p | Cleavage | 4.5 | 12.47 | 1 | 21 |
| Osa01LNT0040700.1 | osa-miR5337a | Cleavage | 5.0 | 13.36 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0040700.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0040700.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0040700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0040700.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Osa01LNT0040700.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0040700.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0040700.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)