© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0040800.1
GGACAAATAAATCACATACATTCTGATGTTTTTTGTTTCATATGGAAGATGATCAAATCATTCCAGGCCTCTGAATCTAGGAAATGCACACGGATAATAATTTTAAGTTCACACAATAAATCACACGCCACTCTTCAAATCTGAAAGTGTTTGGACTTTGGACTTCACATCAAAAGCATATGCTTCAAACACAAAGTTAAGAACACAATTCTGCAGAGCTCAATCAAAACAGGTACTTGGAGATGTAGTACTTATTAGAGCTGGGAGCTGCAGTTCTGTTCCTGTCACCCAGCCAGTGCTGCATGTGCACGCCAATGGCGTCCAGGTACAGGCCGCTCCGGCCATGGAACCCGACCACCTTCCCTTCCGTCGTCGCCGAGCTGAAGTAGGTCCCGACCTCCTCGCCGAACGGCCCGTACTTCCCCCGGTTGCTGACGAGAGTGATCGACCTCAGCACTCTGGGCCCTTCATCCTGGCAGGTGTTGTAGTAGCCGTATATGCAGTTCAGGACCTCGTGTGGGTAGTCCAGCTTGATTCTGTGTGTTATCTGGCCACCGTTGCCGTGCCTTGTGGACCAGATGGATTGGCCACTCCTGTCGTACTCAATCTGCACAGAACCGATGAAATCGGCTCTCATGATGTAGATTTGCTTCACTCCTGTGTAGACACCATCGTCCCATGGCTTGCCTCCCTCGCCACCCCAAGGCCCTGGCCCTACTGGTATTGGTTCTTTCACCACACCATATGTAACCTCATCTCCTATTTCCCTCTGTGCTACTGCAAGCATATCGGCGTGCCGAGACGGGCTCGTTTCGGTCAATGCTCTGTCAGCTCTCTGTGACAACACCTTGCCTTCAAGGACATGGACTCCAATGCTGTCGATGTACCACCCATCCCTGCCATGGAATCCTACTATCCTACCTTCGGTCAGGCAGCTGGAGAAGAACGTGCCAGTCTCATCCCCGAAAGGACCATGGCTCTTCTTCGTCGTGTGGAATGTCAGAGACTTGATCACCGTTGATCCCATGATCATCGTCGAACTGAAGTAACCAGTTATGTGAGTTAAGATCTCTGATGGAAAATCGAATACTACCTTCTCAGCCCTTGCTGCCCCACTGGATCCACGCTTATCACCCCATATAGCCTGCCCATTTCGATCATAGAGGACCTTCATCGTCGATATACCCAATCCTCGCTTTAAATTGATCTGTCGAACACCAGTGTATATACCGTCGTCGAATATGGTGCCGCCATTTCCACCCCAGGGACCAAATCTCACCGGAGTGCTTATTGTCATGGTCCCATTATCCGAGTAGAAACTAGGCAGTGACACCATCTTGTTCCAGAGAGTAGCATCCTGTGATTGGTTAGGATACTGTTCCTTGGGATTGTTGCTAGTCAGGACACTGTAGCTGTCACCTCTGTCTCTGACGGCAAGAACCATGTCATACCCAGCATTGCTATCTGCGTACCTGTTGCCATTCTTGTCATGAGGTCTCGTGATGCTCCTGAGAGCTGAAGGAGCATTGGACGACGGAGTGGCGTTCTTCTCCTTCTTGAAATGGCAGCCGATTGAGTCGAGAAACCACCCGGATTTGCCATGGAAGCCGATGACCTTACCGGTGACCGCCACTGGGAGCGAGAAGGGCGTCCCTTCCTCGGAGCCGAAAGGCCCGTACTTGGAGAGGTTGCTCCTGAATGTTAGTGATCTTACGACGATGCAGCCTCCCAATGATCCGTAGTAGCCACTGACAGAGGTGAGGATTTCTTGAGGGTAGTCGAGTTTCACCTGATCAGTTTTGGTGCCTCCATCACCTCCATGCTTCTCTGACCAGACTGACTTTCCTTTCAGGTCATACTCGATCTTGATGGAATCAATGGCTGCACCATGAGTAATCACGACCTGCCTCACCGTGGAGTGCACGCCGTCGTCCCAAAGGGTTCCTCCCAACCCTCCCCACGGCCCAACGAGTATCGGGTTCTTCCCGTTGAATCCTTTAAAGCTCATGTTCCGTTGGCCAAACAAAATCAACTGACGGAGAGAATTGACTAATTAAGCTTTTTTCACAGCTGGTGCCAAGTGATGAGCTTACTATTACGACAAGAAGCACTCACCTGCCTATAGGTCTTCTGCAATTTGCGTATAGGTCTTCTACGATTTGCCCGGTTTGATTCACGGGACGGAAAGAAGCTTTTTTTTTTTTTTGTTGCCCTCCGCTCGCTCTCATCTTTCGTGATTCCCGGCGTTCACGATGGAAAACTAAAGTTGGCACCCGTGTTTTCCTTTTCTGATTATATGAGGATTTCGAGAATTCTCTTCCCATTGTATTGTCACTTTCTTGTCTGCTTTCCTTCATCTTTTGGGTTGAATCGATCAGTTGATGTCGTGAAATGGACGGCATGAAAAACATCAATATTTTGTAGAAACCAGCATCAGGCATCAGGCATAGCATCAAGTGCACATTCTAAGAAATTTTTGAGAATTCTCCTCCCATGGTCTTGTCACTTGCTCTGCTTTCCTTTTATCTTTGGTTGAATGGAACAGTCGATATGGTGAAATGGACGCCATAAAACACACCAATAGTTTGTAGAGACCAAGCATCAGGCATAGTAATAAGTGCACTGCAGATTGGTTCAAACTGACGATATCTCTGCACGAACATACAGAATAGCTCAAGGTTCTGATATGTACAACTTTCGATGGCGTCAACGGGTAAAGGGGAAATGGGGAACTGTAAATGAGGAAACAACAGTTATACAACATTCCTCTTTCGATGCAGATGATATTGTTGGTACACCACTGATGATATCGTTTAATCCAGAAGGCGGTTCTCTGAATAATATGTGCATGAGCATCCCGTCGCTTGCTTTCACGCAACTGTTTTACACATTCTGAAGGGAACTCTGGTGGCCATAGGACTGGAGCCCTGGAGGTGATCTTTCTAACGATTGATTGGTTGCACCTTACTTGTTCAGAAAGGCCTTCAAAGAAAATGGCGGGTAAGAATCCTTGCCAACTTCCTGCTGTAGGTATTGTCTAACCACAGTTGCTTGCTGTATCACTCTCTCCAATGATGAATATGCTGGTCGATTAGCATGTGCAAGAACAGCCCGATTCAAGCTATCTGCAACATTCTGCCTGTACTCTGGGCTTAGTAGATGAAACATAGGTGACTTCTCAGGCTCTTCATAAGCTAGGAGGGCCATAAAGTCCTCTAGTTTCTCAACGTACTTGGGCACTTTCCCAAATGGCGTCAACTTTTTCTGACCAAACTCAAGAGCTTCATTTTCTAGAACGAACTAACTCAATGAAGTGAAGACTTAAAAGATCAAAATGCAAATCCATATCATTCTCTAGCAAGTTAGGTGCCAACTCTTCTGTCAGGTCTATAGCCTTCAGGGCATTGCCTTCCAACACAAAACTAAAAATCGCTTTACGCTTATCTACATCTACAGTGTAATCAACAGGCAGTTCCAAACCAGTGCTGGATAAGAATGTCTCAGCAGTCTCCTTAAAACAGTTGTGCATAAGATAAGACAACACTATGTTGCGGACATCGTTATCACTCACGGAGACGTTCTCGTAGAGGCGGGGATCCAGGTCCATCATGGCGGGAGAGGCGGAGATCCGCGGCGGATGCGAGGTAAAGGGGGGACGCGGGCAGCAGGAGGAGGAGGGGAGAGAGGCTGCCGTGCCGCCGCGCTGCCTGCCTGCCGCTGGGGAGGCCGAAGATTCCCAAAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0040800.1 | 1 | 32814522 | G | A |
| Osa01LNT0040800.1 | 1 | 32814538 | T | A |
| Osa01LNT0040800.1 | 1 | 32816940 | G | A |
| Osa01LNT0040800.1 | 1 | 32818131 | T | C |
| Osa01LNT0040800.1 | 1 | 32818214 | A | G |
| Osa01LNT0040800.1 | 1 | 32819025 | T | C |
| Osa01LNT0040800.1 | 1 | 32819274 | A | G |
| Osa01LNT0040800.1 | 1 | 32819401 | A | T |
| Osa01LNT0040800.1 | 1 | 32815383 | A | G |
| Osa01LNT0040800.1 | 1 | 32812308 | A | G |
| Osa01LNT0040800.1 | 1 | 32814738 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0040800.1 | osa-miR5143b | Cleavage | 5.0 | 17.345 | 1 | 24 |
| Osa01LNT0040800.1 | osa-miR5820 | Cleavage | 4.0 | 19.782 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR2873c | Translation | 5.0 | 11.564 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR156a | Cleavage | 4.5 | 14.573 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR156b-5p | Cleavage | 4.5 | 14.573 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR156c-5p | Cleavage | 4.5 | 14.573 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR156d | Cleavage | 4.5 | 14.573 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR156e | Cleavage | 4.5 | 14.573 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR156f-5p | Cleavage | 4.5 | 14.573 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR156g-5p | Cleavage | 4.5 | 14.573 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR156h-5p | Cleavage | 4.5 | 14.573 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR156i | Cleavage | 4.5 | 14.573 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR156j-5p | Cleavage | 4.5 | 14.573 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR166b-5p | Translation | 5.0 | 21.59 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR166c-5p | Cleavage | 5.0 | 16.78 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR166d-5p | Translation | 5.0 | 21.59 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR156l-5p | Cleavage | 4.0 | 14.573 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR164e | Cleavage | 5.0 | 16.858 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR164e | Translation | 5.0 | 17.235 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR164e | Translation | 5.0 | 11.649 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR171h | Translation | 5.0 | 19.23 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR415 | Cleavage | 4.0 | 17.564 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR435 | Cleavage | 4.5 | 21.446 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR444a-5p | Cleavage | 4.0 | 20.767 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR1432-5p | Cleavage | 4.0 | 16.287 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR1846a-5p | Translation | 4.0 | 23.53 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR1846b-5p | Translation | 4.0 | 23.53 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR1874-5p | Cleavage | 4.0 | 24.881 | 1 | 24 |
| Osa01LNT0040800.1 | osa-miR1846c-5p | Translation | 4.0 | 23.53 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR1846e | Cleavage | 5.0 | 22.841 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR2094-3p | Cleavage | 5.0 | 21.468 | 1 | 22 |
| Osa01LNT0040800.1 | osa-miR2095-3p | Translation | 4.0 | 24.81 | 1 | 20 |
| Osa01LNT0040800.1 | osa-miR2863b | Translation | 4.5 | 21.223 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR5076 | Cleavage | 3.5 | 16.773 | 1 | 22 |
| Osa01LNT0040800.1 | osa-miR5143a | Cleavage | 5.0 | 17.345 | 1 | 24 |
| Osa01LNT0040800.1 | osa-miR5513 | Cleavage | 4.0 | 13.628 | 1 | 21 |
| Osa01LNT0040800.1 | osa-miR5524 | Translation | 4.5 | 18.177 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0040800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0040800.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0040800.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Osa01LNT0040800.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0040800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0040800.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0040800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)