© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0439200.1
GAAATTCAATTGTTCTTTTTTCTTTCATACAGTTCCTAAACTGTCTAGTCCCAACAGTCATGTACAAGCAAAATATTGAGGAAAACCAAATTGGATCATGACCTTTTTCTATCATGGAGAAAATTTCCAAATCAACTGATATTTATGAATTCTCACAGATAAACTAGTTACTAATGCCGCACAAAAAATAATAGAATTAACTAAACTCGCTAAGGATGGTAGGAGTTTATGATGCACACGCATATTGGGGTACAAAACATTTTTGCCTGACTAACTCATGCAGATCGTGGACAATTTTAAACACTGCATCCGGTCGCGCTAGTTTCAAGGCATTTTGAGACATCATTTTGAGCTCGTCTGACCTAGGGCCAAACCAATCGGCTACAATCTTTGCAATTTGTTCTGGAGATTTTGAGAACTTCCCACATCCATTATCAACAACATATGGAACATTGCCAGCTTCCTGACCAGCAATATATCCATTTAGTATAATGGGCAGGCCACGAATCATGGCCTCTGCAATTGTACCAGGCCCCGCCTTTGTAATTATACAGTCACAAGCACCCATGCATTCTTCCATCTTTGTAACGAAACCCTTAACCTGAACTGGAACTTTCCAATTGATTGACTGCAATCGGCTAGTCAGCTTCTTATTACGGCCACAAATCACAAGTATTTGACCAGTGGGTTCACCAAGGACTTCGTCATATAGAGCATCACCAAGTGCTCTAGCAGTGGCTTCAATAGGACCCATCCCTTCCCCCCCACCCATTAGTAGAACAGCAGGCAAATATTCATCCATACCTAACTCCCTTCGCAGTTCATCCTCTGGTCGAATAGGTTTGACAAAAGATGGACGTACTGGGAGGCCATAGACTTTAATTTGCGAGGGCTGCAATCCAGCTTTTAGTGCTCTCTTTGACACTTCAGCTGATGGACAGTAACATCTAGTAACAAGCTTGTGAAACCTACGGGATAGCAGTAAAATAACTATTTCACTGTAAGGGCAATAACATGTGTATCTTAAACTTGATAAGTGACCTGAACTGGTATTAAGTTACATGAACATTGAAACCGGCATACCATGTTGGGTGACAAGTACTCAGATCTGTGACAACTGTTGTGAACGGAATCTTATCCAGTAAACCTTTTGACCTTAGGATTCGGAGTGGGACATGCTGCATTAAAGGATGGACACTGATAATTACATCTGGTTGGTATTTCATGAGACCTTTTGCAACCTCTCTGCAGGAAAATAAGAGAGGCAATTTCGATATTATATACCATGTTATTCACAAATATAGGCAAGGACCACAGCTAAAGTATAGCACATACTCACTCCATCCAAAGTATAAGCACTTCTGGAGTTTTTCACGGGGATTAAGGAGAGAGGTAAAATTAAATGGGGGATGGTTGTGATTGGTTGAGATGAGGAAGTAGGTTGAGAAATTAAATGAGAGAGTTGTGATTGGTTGAGATCAGGGAGTAGGGAGAAGTTGCTGTATTTTGGGATGAAGGGAGTATTTAACAAGACAATAAGGGTCTACATGTGAATCACTTTAATATTAACAGGAAAATAACTAAAGAGATCAAAGTAAAGAAAGCTAGCCACCGCGGAGTGTTCTCGAAAAGCTAAACTTTAGAACATCATCACAGGCTCATGGGAAACCATAGAATTGAGGCATTGGGTATATAAACCCACATCCCTGGCAGTGGTCCTAACTAATGTTCTTTAATCATAAAAAAACCGCTTAATTTAGATAAGGCGACATAATATATTTTTAATTCAATCATGACCATAAGAGTGGCTGGCCTGATATTAACAAAATTTGAGGTGAAAAAACAAAAACTCACAATATGTTTGGAAATGAGCAAGAATGACATGAATGGTAGATACCAAAAATTCTTAACATGTATTGTTCAGAAGTTATTCACTGCCATAAACCACACAAGGAAAGCATCTTCGTGAGTTAGAAATCAGACTCTGTAACTTATCTGGCAATACAAGTTGCAATTTGAGTTATGTATGAATTGTGTCAGAATAACAAAGAAATCCTAAGATAATTAAAATTAAAAATATATTAAACTAAGAGTAAATTTCACAAAACTACAGATACTTGTGTCAAATTATCACAAAACTACATATTTAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0439200.1 | 9 | 15350268 | T | C |
| Osa09LNT0439200.1 | 9 | 15350397 | A | G |
| Osa09LNT0439200.1 | 9 | 15351869 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0439200.1 | osa-miR5538 | Cleavage | 5.0 | 10.44 | 1 | 22 |
| Osa09LNT0439200.1 | osa-miR5542 | Cleavage | 5.0 | 18.131 | 1 | 21 |
| Osa09LNT0439200.1 | osa-miR6253 | Translation | 4.5 | 8.43 | 1 | 22 |
| Osa09LNT0439200.1 | osa-miR6255 | Translation | 4.5 | 8.43 | 1 | 22 |
| Osa09LNT0439200.1 | osa-miR1438 | Cleavage | 4.5 | 6.284 | 1 | 22 |
| Osa09LNT0439200.1 | osa-miR1439 | Translation | 4.5 | 19.68 | 1 | 21 |
| Osa09LNT0439200.1 | osa-miR2275a | Translation | 3.5 | 11.789 | 1 | 22 |
| Osa09LNT0439200.1 | osa-miR2275b | Translation | 3.5 | 11.789 | 1 | 22 |
| Osa09LNT0439200.1 | osa-miR5487 | Cleavage | 5.0 | 13.116 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0439200.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0439200.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Osa09LNT0439200.1 | 9 | qSB-9 | Resistance or Tolerance | Sheath blight resistance | C472 | R2638 |
| Osa09LNT0439200.1 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)