© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0439500.1
CGGCAATTCGGCCCCACATCTTTAACAAATCAGGCCATTTGCTGGCCGCTCGAATGTCGGAACAGACAACAGGTAAACTAGTCATAAACAGCAAAACTGCACAGATCTGTCGATCCGTTTTTACTAATCATACAAAATAGTCTAGTGTTGTCGTAATGTGTAAACAATCAGAGCTGCTCGCTTGAGACGGCGTCTGCCAGCAGGAGAGGCTCCTCAGCGGCGGTGCGCTCGACGTCGCGACACGAATCCGTGCATGGCTTCGCCGCCGCCGCCGCCGTCGCCGGCTCGCTGCCCCGCTTCATGTCGTCCGCTTTTCCCCACAGGACGACGTACAACCCGGTGATCACAGCAGCTGCTCCCATCAAGCTTCCAATGTGCAGCTCCTCCTGGAGAACGGCGGCGGCGACGATGGTGGTGACCACGGTGCAGACAGGGGTGAACATGGCCGAGTAGAGGGGCCCCCTCACCGAGATGCACCATGATTGCAGGTAGAAGCAGACGCCTGACCCAAACACTCCGGCGAAGGCGTAGCTCGAGAGCTCGAAGAGCGAGTGGATCTTCCATGCGTTCGCGTCCGGGACCAGGAAGACGGCGAGCGCTGCGCATTGCAGCGTCGAGAAGAAGCAGGTCCATGCCGACAGAGACAGAGGATCCACATAAAATTTGCAGATTGGCACCTGCAGTATGAGCCGGAGTGACCAGCATGAGCTGCTGACGACGAGGCAGAGCGCGCCGAGAACCCACTTGCTGATCGCCGGCGAGTGGAGGAGCATGTTCAGGTCACCAAGCGTGTAGTTCAGAAGCTTTGGGCCTTTGAAGAACGCCATGGCCGTGGCTCCTCCCACGCAGACTATGGTTCCGGATATCTTGGCCATGGTGCCCCGTTCTCTGACGTTAACTCTTTCCTGCCCTGCTGACGCTGCCATCAAGAAAGTTATCGCGGGTATCAAATTGGTCATGGCCGTCGCCATGGATGACGAGCCCAGATGCAGCCCTTGGTAGGTCAGGTTCTGGTTTACCGTCGCCGTGCCCGAGCAAAGCCGTCACAAACACCAAGAACAAGCCTGTCGTCCCAAGGCTCCTCGTCTCCTTCACTTTTGCCCTGTTGGCGAGGAGGGTGATGGGGACGAGGACGAGGGTGCCGATGGCCTGGCGGTAGACGACGAAGATCACGGGGCTGACGCCACGGCCGAACATGGCCTTGGCCCAGAGCGTCATGGCCGCGTAGATGCACTGCGCCGCCACCATCGCCGCGCACGGCGTCCACTCCCTCGCCGCGGCCGCGAGCATGAGTGCCATGGTTTGGCTATGGCCTATTGGCCTAGCTCGATCTCGATCCGGCAGCGCAGAATTGATGAGATCGCCGGCGCCGCATACAGATGCAGATGCGCGCGCACAAGACGCTCTGCTCGTGCTCGGCTAGCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0439500.1 | 9 | 15454045 | A | T |
| Osa09LNT0439500.1 | 9 | 15454908 | T | C |
| Osa09LNT0439500.1 | 9 | 15451165 | T | C |
| Osa09LNT0439500.1 | 9 | 15451854 | T | C |
| Osa09LNT0439500.1 | 9 | 15451870 | T | C |
| Osa09LNT0439500.1 | 9 | 15451879 | A | G |
| Osa09LNT0439500.1 | 9 | 15452350 | C | T |
| Osa09LNT0439500.1 | 9 | 15452477 | T | A |
| Osa09LNT0439500.1 | 9 | 15454518 | C | T |
| Osa09LNT0439500.1 | 9 | 15454776 | C | T |
| Osa09LNT0439500.1 | 9 | 15454825 | C | T |
| Osa09LNT0439500.1 | 9 | 15454882 | G | A |
| Osa09LNT0439500.1 | 9 | 15454981 | T | C |
| Osa09LNT0439500.1 | 9 | 15455390 | T | C |
| Osa09LNT0439500.1 | 9 | 15454432 | A | G |
| Osa09LNT0439500.1 | 9 | 15452589 | T | C |
| Osa09LNT0439500.1 | 9 | 15453729 | A | G |
| Osa09LNT0439500.1 | 9 | 15453891 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0439500.1 | osa-miR5837.2 | Translation | 5.0 | 23.291 | 1 | 21 |
| Osa09LNT0439500.1 | osa-miR444a-3p.2 | Cleavage | 4.5 | 22.777 | 1 | 21 |
| Osa09LNT0439500.1 | osa-miR444b.2 | Cleavage | 4.0 | 22.777 | 1 | 21 |
| Osa09LNT0439500.1 | osa-miR444c.2 | Cleavage | 4.0 | 22.777 | 1 | 21 |
| Osa09LNT0439500.1 | osa-miR444d.2 | Cleavage | 4.5 | 22.777 | 1 | 21 |
| Osa09LNT0439500.1 | osa-miR444e | Cleavage | 4.5 | 22.777 | 1 | 21 |
| Osa09LNT0439500.1 | osa-miR5078 | Translation | 5.0 | 24.108 | 1 | 21 |
| Osa09LNT0439500.1 | osa-miR5151 | Cleavage | 3.5 | 16.634 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0439500.1 | 9 | qSB-9 | Resistance or Tolerance | Sheath blight resistance | C472 | R2638 |
| Osa09LNT0439500.1 | 9 | nan | Morphological trait | Panicle/flower | RM257 | RM566 |
| Osa09LNT0439500.1 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Osa09LNT0439500.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Osa09LNT0439500.1 | 9 | qAC9 | Physiological trait | Eating quality | RM4413 | RM5122 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)