© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0440000.2
ATATCAACAGGCTCTTAACTTAATTTGACCAGCTACCGTAGTAGCTTAGCTGTGTTGTCAGTTGTTACATTCTATATAAAACTTAAGCTTCCTACGCTGAACCAAATTAATAGGGTAATACAGATCACAACACTACACACCTTCCTCTCTCTATCAGCAGCCTGCCTATTCTCTACTCTACTGGGCTCTTCTCCCCGAAACACAGGGCAAAAAAGAAGAAAGGAAAACTAAACATTTCGTGATACAGACACTGTATTCGCAAAGCCATTAGCTACCTTTTGGGGAGGAGGTTTCTTCTTATAGTTTGCTAGACTACAGTGAGGGCAGATGTATTCCAGCCCATCTGTCTTTGCATAATCCTTGAAAGTGCCTAGGCCTTGTCGTCTGTCACAACCAAAATGTGCCCATTCACCACACAAACCACAGTTCACCCAATCTCCAGGAGCGCTACTGTGGCAAAGCAAACAGCATTCCCCGTCTACATCATCATGAGCTAGCTCATATTCCAGTAAATATGTTTCGTAATGTCTTTTCAGTGTGTTTCCAACACCGGTCATTCTATTTGTCACAGTATGGTTACGCATCTTCGAGAAGACTTGACCCTTCCAGTTTATACCATTGCCTACATAAAAGCCACCCCTAGACACCACCTCTTTGTACAAGTTATATAGGTCAAGGCGCTTCGCATTAAGGACGGCCTCAGGAAATTCAGCTAGTCCTCCATGAGGTACGAGTCGATTATGACCCCTCTGAATTAAAAACTGCATGACATCCTTCAAGAAGTCCTCCTCAGAGCACATCTGAATAGGCAACCGATCACATCCATGTTTCTTCAGAGGCAGTGGGTTCAGTTGAATGATTGACTGAGCATGAGATGGCCCTGAAGTTGATTTTCTATGTGTTGCTGGAGCAGCAGGCAAGTTTGGCTTAACCTGACTAGTTTCATGAACAGTAGCTTCCAGGAAACCCATAAAAGGATGCATTTGTTGCTTTCTAGAGTGAGGAATGGGCCTCATAGTTGCAGGCTTCAATTTTGCCTTGGAAGATGAGGAAGGCCCTTCGATCAGACGTTTCTTGTCCTCAGGAATTCCATTCGCACCTAACAAATTTGGTTTCGATTCCAGACCCACCTTCACTCTTTCCTTGGTAAGAGATGCTGACCATCTTGGCAGATGAAAGTATGGGCCATTTTCAATAGCCAAATCTTTGTGTTGATTTGTACAAAAGAAAAGAAGGCGGTCTGCATCTCGCCTATCAAATGAAGCAACAGGCGTGCCATTTATACAACCAATTCCAAGTGCCACTAAGCTCCTGTATGAGATGTCTGGCGCTAAATGCTTCAGAACCTGTGCTGCCCACTTAGGAAGGGTCATCCAAACTTCAAAGGTAGAAGCCCCACAAGCTGTGGACATTGAAGTGAAAGGCACACTTGATGATAACTTATCATCATTATTTGGCAGAGCATGGACTAGTTGGCTCTTCTCAATGATCTCATCCTTGATGTGGCTTTCCAAAAGCTGGTCATCAAAACAAGTTTGTGCGCTACCAGAAACAAGAAGTGACACATGAGAAGAACTGCACGTAGTGATGTCGCAACGCATTGTAACCATTCCACGTGGTAAGGATGCAGCATGAAGTGGTGGTGGAGAAGCACTGATTCGATTCTGAAGTTTGCACCCCCGAATTTCAATATTCAGAAGTGCATTCAGGCCATCTTCTAATGAACCTAACAAACAAGGATCCGGTGTGCTAGGAACTCCACAAAGAAGAAATTTCATGTTGATGTCATCATCATAAATTTTTATAGCTGGAAACACATCTGAAGAACCTTCCTCCTCAACCATCTCATTCTCAGGAGGGGTTATATTTATCTTTGGAGCATCCCCTAGTAGACGAGGCCCAAGCTTAACACTTTGTACATGGTTGTTTCTTACACAGTATAATCGAAAGGATGCATGAGCAAGCTGAAAAGCATCCCAAGTATGGCTCACCGAACTTTGAACCACTGACATTAATGCATGGCGAAAATGGGATGCTGCATATGATGAAAATGAATTTCTCCAGTATATTACGTATGGAATCCCCTTTGAATGAACTGCTTGAGCAAGTTTTTCACCAATTGGAACCTCCAGATAAACTATGGTCGGAAATGGCGGGCTGATGAGACAACTAAACGCCTGCGGATCAGATACGTCATTGTCCCCCCAGACGAGCGAGCCAATCTCCTTCTCATCCTCAAGCTGTTGCCCCTGGATGTACAAGAAGTTGGGCTGAACCACGCGCTGCGCCTCGAGGAACTGCTCTGGTGTCGGGTTGAACAGCGTGTGCACCTCCAATCTCCCCGACGAGCTGAGCTCCGGGAACGGGTACGACGGCCGCAGCCGCTTCGCCTCCAGCCCCGACCTCGCCTGGGCACGCTTCTCAGCGTGCTTCCCACACAGCACCGCGAGGAGCACGCAGTTCTGCCGCGAGAAGCTCTGGATTTGCGACATGGCCGCCGCAGCAACCCTACCCCCCTCTCTCTCTCTCTCTCTCTCTTCCCCAACTTCACCTCACGCCCTCATGGAACCCAGGGCGCAATTCAGAGGCCGAATCGGAGCCCCCGCGACACAGAATCGAGTCAATCGACGGCTTCCCCCTCCCCAGATCGCTCCCTCCCCGCGGCGCCGCAGGAGGGGAGAGAGGATTCGATTTGGAGGGCAAAGGGGAATAATGATATAGAAAAAAAAAGAGTAAAGTGGGCGAGAGAGAACACACACGGAGCCCTAGCGATTGCCGAAATAGCTCTCTACAATCCCCACTCCGGAAACAATAAAAAAGAAGCGTACTTGTGGTGGTGGAGGCGAATTGGACGCGAGCCCAACCCACCCCGCATCCATCCCGATCGAGCCAAGACCAACCAAAGGAAAAAAAAAAACCAAAAGCTTTGGCTCCGCGACGAGATGACGAAATGAATCCAAGAAAAACCTCCACAAATCCTGACCAAGAAATTGAACGCCTCTCCTTGGGAGGAAAAGACTCGATTATTAGCAGCAGCAAACCAACCACCAGCCTGACAATTATTACCAGAGAGGGGGGGCGAGAACAGTAGGCGGCCGGGGATGCGCCAAGATTGGATTTTGACGGCTGCGAGAGAGAGATTTGTGAGAGATTTTTATTTTATTTTCTTTCTCTCTTTCTTTCTCTCGAGCAAGCAAAGCTGCAGCAGTGGAGATGTGGGGGGTGGGCTCGAGACTTTTCCTCGGATTTTTTTCCTTCCTCTCACATCTAACCTATTCTCCTGATGAAGCCTGAGCCGATGATGCTTGCTGCTGCTGCTGCTGCTGTGGATGTGTTGGTGCGTTGTTTTCTTGGCGCTTTTCGTTTTCTTTTCCTCATTACTTCTACTACTACTACTGCTCTGGCTCGGACGGAAGGGAAGGGAAGGGAATTTTTAGATGATTAGATTAGATTTCGCTGGAAATGGGGATTGGGGGGATTTCTTTTCTTTCTTTTGAGTATGTGGTGTGGTGCAGCGTATATTGATCGATTGGGGGATTTTTAATTTATTTGGACAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0440000.2 | 9 | 15939644 | A | C |
| Osa09LNT0440000.2 | 9 | 15938702 | A | G |
| Osa09LNT0440000.2 | 9 | 15941029 | A | G |
| Osa09LNT0440000.2 | 9 | 15941518 | G | C |
| Osa09LNT0440000.2 | 9 | 15941539 | C | T |
| Osa09LNT0440000.2 | 9 | 15942475 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0440000.2 | osa-miR5527 | Cleavage | 4.5 | 17.2 | 1 | 21 |
| Osa09LNT0440000.2 | osa-miR5542 | Cleavage | 5.0 | 9.804 | 1 | 21 |
| Osa09LNT0440000.2 | osa-miR5832 | Cleavage | 5.0 | 23.966 | 1 | 21 |
| Osa09LNT0440000.2 | osa-miR6251 | Translation | 4.5 | 19.793 | 1 | 21 |
| Osa09LNT0440000.2 | osa-miR166h-5p | Cleavage | 4.0 | 8.221 | 1 | 21 |
| Osa09LNT0440000.2 | osa-miR166i-3p | Cleavage | 4.0 | 23.316 | 1 | 21 |
| Osa09LNT0440000.2 | osa-miR1427 | Cleavage | 4.0 | 19.793 | 1 | 21 |
| Osa09LNT0440000.2 | osa-miR169r-3p | Translation | 4.5 | 15.335 | 1 | 21 |
| Osa09LNT0440000.2 | osa-miR444d.3 | Cleavage | 4.0 | 17.636 | 1 | 21 |
| Osa09LNT0440000.2 | osa-miR1882a | Cleavage | 5.0 | 21.235 | 1 | 24 |
| Osa09LNT0440000.2 | osa-miR1882b | Cleavage | 5.0 | 21.235 | 1 | 24 |
| Osa09LNT0440000.2 | osa-miR1882c | Cleavage | 5.0 | 21.235 | 1 | 24 |
| Osa09LNT0440000.2 | osa-miR1882d | Cleavage | 5.0 | 21.235 | 1 | 24 |
| Osa09LNT0440000.2 | osa-miR1882e-5p | Cleavage | 5.0 | 21.235 | 1 | 24 |
| Osa09LNT0440000.2 | osa-miR1882f | Cleavage | 5.0 | 21.235 | 1 | 24 |
| Osa09LNT0440000.2 | osa-miR1882g | Cleavage | 5.0 | 21.235 | 1 | 24 |
| Osa09LNT0440000.2 | osa-miR1882h | Cleavage | 5.0 | 21.235 | 1 | 24 |
| Osa09LNT0440000.2 | osa-miR2866 | Translation | 5.0 | 22.28 | 1 | 20 |
| Osa09LNT0440000.2 | osa-miR5077 | Translation | 4.5 | 23.687 | 1 | 19 |
| Osa09LNT0440000.2 | osa-miR5485 | Cleavage | 3.0 | 21.152 | 1 | 21 |
| Osa09LNT0440000.2 | osa-miR5517 | Translation | 4.5 | 23.311 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0440000.2 | 9 | qSB-9 | Resistance or Tolerance | Sheath blight resistance | C472 | R2638 |
| Osa09LNT0440000.2 | 9 | nan | Morphological trait | Panicle/flower | RM257 | RM566 |
| Osa09LNT0440000.2 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Osa09LNT0440000.2 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)