© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0440100.1
CACACCACCATCAGCAACTTTAACTGAAACAACATGCTGTAAACATTGGATACCCTGAAGTTTTTGTGCCACAGTAATATCAATGAAGGAATGAGAACTACCAGAATCGACTAACATGAGTAATTCATACCCCTGTACCCAGCCATTTAACCGAAAAGAAGTCAAGGATTCAGTACCAGTAACAGCCTGATAAGAAATAGCCATAAAAACTGGTTCTACAGGTTCAGATACAGTATCGACGGACTCATGGTTTAACTGATCGTCCTGCAACGCAGCTAAAAGTTCCTGAACAACATGTAACTGAACCGAGGAGCCACACTTATGCTCTCTGCTCCAATGCTCACCACACGTGAAACAAAGGCCTTTAGCACGCTTGTAGGATTTCAAGGCAGAAAACTTATCAGAGCGAGACTGTGAGAATTCAGACTGTTTCCTATCCTCCAACACAGAACCTTGAGGATGGTTGGACACAGGAGAAACAGGTGCAGGTTGGCGAGCAAAATTTTTAGACAACAAAATCGGCTCAGGTTTCCTGTACACAGCAGGGTGACTTCCTTCTAGTATTTCCTCTTGCAAAAAAGCCAACGAACACGCTGTATCCAAATCTTGAGGTTTCTGCATCAAAACTCCAGATCTAATGTCTTTCCTCAGTCCTTCCACGAACTTGGTAACAAAATAATTCAGAGGCAAAGAACTATCATAAGCCAACAACTGATGCATAATACCATCGAATTTCTCCACATAATCAGAAACTGAAGAATCCTGAACAATGTGAAACCACTGCCGAATCAAGACCTTCTGCCTATCCTTAGTGAAACGAAGACAAACTTGATCAAAGAACTCTTGCCAAGTAACCCCGACCAGTTTGGAACGCACCGATTGTAACCAAAAAGCAGCGTTGCCAGTAAAATTCAGTCCAGCCACACACACCCAATTCTTAGGATGAACACCATAAACCTCAAAGTACTCCTCGCAATTACTCTTCCAGAGCTGACGACTATCACCATTGAATTGCGGACAAGACATAGGTGGAACATTACCCCCAATTCCCGAAGCACCCAAAAGAGCAGAGGCAAACGCAGACTGTTCCAGAGCAGAGGGGAGCGAAGTAAATTGGGGCGGAGTTTGCATACCATCGGGCGAACCCGGAGAAGAAGGGGAAGGACGAGGTGGCTGCTGCACCAAGGACTGGAGTTTGTCGACTTGATCTTGGAGTCCCACCACCGAAACGTGCAAATCATCCACGCGCTTCTCCACCACCGGCATTCGGGATTCCACCGCCACTTTGAGAGCCAAAAACTCAGATCGGCTCTTCTCTTCCGACAGCTCCCGATGCTTCTCACTCTCCTCCCGTTTCTTCTCCACCTCCTCCATCTTCCTCAACAAGAGATCGAGCTTACTTTCCTAATCCATGATCTTGGCCGCTTGCTTGGTCACGTAGCGAGGCTTGTCGTAGCACGCCGTGATTGACGAACTCGCTCGAGATCTCGCCGACCTAGTTGAGGGAGCCGAAGCTTTTGCGGAATATAGTTGCCGAAGCAACAAATTCCCACCTCACCCAGGAATTACAGCAAAATCAAGAGGAGGAAAAAATTTCGGCAAGGCTCTGATACCAATTTGTTAACTACCCCCAAGGACAGAGGAAGAATCGCCCAAACAGAACAACGATACACACACACAGATGGATTTCACCAACCCGACAGGGTTGATGCCGCCGCCGCCTTCGCCGCCTAGTTCATCCTCAACTCATCCAAATGAATACAGAGTTAGTTTTAAGATGCTTTCTCTCTCACACGCAACTATCGACAGCCTGGACATGGTGCTCATATGGCCCATTCCGGCCCACTCACTCTAGGATTACATACTCGGTGCCTAACAGGTCTTCCTTCCTTAGTCTGCTTAACCTCCTTGGTCTTGACAGTGTTCTGTAGCTCATCCGGTACAACTGTGTTGCTGACAAGCAGGTTCATCACGATGGACAAGTCTTGTTGTTTGAGCAATGTCAGTCAGGTGGAGTGAATCACATTAGTACTGGTTCAGCGTCGGAGGAGTTGACGGCGTTCAGCGTCGCCGCGTCGACGCGGCTGTCCATGTTGAAGCTGATCGGCACCACCTCGTCGTCGACGTAGTACGTGTTCCGCAGTGACGCAAGCAGCCGCCGCAGCGACTTGGCGCGGTTCTGCGTGATGGTGTTCACCGAGATCCGCATCCTGTTCCAGTTGGGCAGCGAGGTGGGGCTGAGGGTGGCCATCCAGAGAACCTTGGAGATGGAGTTGCTGACTTCGATGTTGGCTCAGCCCAGGAACACTCTCACACTCACGAACACAAACGCCGGTGAGGGAGACGATGAACAATGGATTTTACAGCGACGAACGCCGCGGAGCCGATCGCTCCTGTATCTTGGCTTTATTCCTCACTGAACCTTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0440100.1 | 9 | 15979255 | A | G |
| Osa09LNT0440100.1 | 9 | 15980591 | A | G |
| Osa09LNT0440100.1 | 9 | 15979265 | A | G |
| Osa09LNT0440100.1 | 9 | 15980859 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0440100.1 | osa-miR6245 | Cleavage | 4.5 | 16.867 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR166a-5p | Cleavage | 5.0 | 14.356 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR166c-5p | Cleavage | 5.0 | 14.356 | 1 | 20 |
| Osa09LNT0440100.1 | osa-miR166e-5p | Cleavage | 5.0 | 14.356 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR169f.2 | Cleavage | 5.0 | 18.487 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR815a | Cleavage | 4.5 | 13.624 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR815b | Cleavage | 4.5 | 13.624 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR815c | Cleavage | 4.5 | 13.624 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR810b.1 | Translation | 5.0 | 23.628 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR1870-5p | Cleavage | 4.0 | 23.022 | 1 | 24 |
| Osa09LNT0440100.1 | osa-miR1873 | Cleavage | 4.5 | 12.642 | 1 | 24 |
| Osa09LNT0440100.1 | osa-miR1883a | Translation | 5.0 | 10.317 | 1 | 24 |
| Osa09LNT0440100.1 | osa-miR1883b | Translation | 5.0 | 10.317 | 1 | 24 |
| Osa09LNT0440100.1 | osa-miR2864.2 | Translation | 5.0 | 19.628 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR2876-5p | Cleavage | 5.0 | 10.029 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR5152-5p | Cleavage | 5.0 | 7.683 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR2864.2 | Cleavage | 4.0 | 10.992 | 1 | 21 |
| Osa09LNT0440100.1 | osa-miR1320-3p | Cleavage | 3.5 | 18.098 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0440100.1 | 9 | qSB-9 | Resistance or Tolerance | Sheath blight resistance | C472 | R2638 |
| Osa09LNT0440100.1 | 9 | nan | Morphological trait | Panicle/flower | RM257 | RM566 |
| Osa09LNT0440100.1 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Osa09LNT0440100.1 | 9 | clr9 | Resistance or Tolerance | Cold tolerance | RM285 | RM434 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)