>Osa01LNT0041200.1

ATCATCATGACCCGTCACCGCAGAGGCAAGCGCGGGCGCGCGAGCCCCGACCCTCCGGCGAAGCGCCGCCGCCGCGGCCGCGGCCACGGCCACGGCCCTGGCCCGCCGGAGTTAGAGGCCGACGAGCTGGAGGCTCCTCCGGCGCCGGTACAGGCTCCATCGGCGGCGGCGGCGGCGGCTTCGGAGCCGTTGCTAGTGATGGTCGCGGGGCTGCCGCCCGGGTGCGGCGTGATGGAGCTCAAGTCGCGGCTCGGGGCGTACGGCCCCATCGCGCGCACCCGCATAGACGCCGCCTCGGCCACCGGGTACGTCACCTTCCGCTCCGCCGCGGCCGCCATGGCCGCCATTGCTGCCTCCCTCGACCCCGACGGTGGCGTCACCGTCGGATCCAAGAAGGTAAGGAGATCTG

Explanation	CPC Score
noncoding (weak)	-0.720056

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts
Osa01LNT0041200.1	DTM_#DNAt_MULE_japo_Os3566	Chr1	-	32906535	32906995	460

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa01LNT0041200.1	osa-miR528-3p	Cleavage	4.0	19.068	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa01LNT0041200.1	1	brt1d	Resistance or Tolerance	Drought tolerance	C742	C904
Osa01LNT0041200.1	1	rfw1b	Resistance or Tolerance	Drought tolerance	C813	C955
Osa01LNT0041200.1	1	qLRC-1	Resistance or Tolerance	Drought tolerance	RM237	RM302
Osa01LNT0041200.1	1	gpy1	Others	Others	RG541	RG101
Osa01LNT0041200.1	1	nan	Physiological trait	Source activity	RG532	RM472
Osa01LNT0041200.1	1	An10	Morphological trait	Panicle/flower	nan	nan
Osa01LNT0041200.1	1	qCC-1	Physiological trait	Source activity	RG541	RG101

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus