>Osa09LNT0440500.1

GAACTAACATCGATAAATAGGCAGGAAATTATGGGGTAGATTGGTGAGGGCCACGCCTGCGAAATTCGAGAGGAAGACGGCGTGGAAGCGTGGCTGGGGGAGCACCCTAGAGGCGTGAGGCAAATTCTAAGCAGCAGCACCGGCGCAGCATCCACGATCCCCCCTGCACACGCACACACATTCAGAACAGTAGGCATGGAGCATAAATCAGGGCAGCAGATTACCTAGTGTTGGCCATTGATGTAAGAGCGAAAAGGGGAAAGATGAGAGAAGAGCCAAGAAGACATCCGAAGCAACGCAGCTGTTTGAATGGCCTCAATCTCTATTAACTAACCGGGTAACAGGAACGATAGGAAAGGCTAGGGCCATGCCAGATGCATCGATGCCTGCGCGCATGCCGGTACGGCTCGTGCGCAGGACGATTTGATGTGGCCTGACGCGGCACGTCAGACACTGTAGCACGCGGCGCTTAGAAAAACATGGCAC

Explanation	CPC Score
noncoding	-1.3548

Transcript ID	Chromosome	Locus	Ref	Alt
Osa09LNT0440500.1	9	16876542	G	A
Osa09LNT0440500.1	9	16876729	C	T

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa09LNT0440500.1	osa-miR7693-5p	Cleavage	5.0	21.512	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa09LNT0440500.1	9	qSB-9	Resistance or Tolerance	Sheath blight resistance	C472	R2638
Osa09LNT0440500.1	9	nan	Morphological trait	Panicle/flower	RM257	RM566
Osa09LNT0440500.1	9	rdw9	Resistance or Tolerance	Drought tolerance	R79	R2638

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus