© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0440600.1
ATAATTAGACAAGCCAATCACATAAATATATTATACAGGTGACTGACCCCCAACCAAAACCACTTCCTGTATCTTTCACCTAACCGTCAATCTACAAAGCCCTCAACTCAAAACATCAACTCCAAACCCAAACCAAGTCAACCATTCCAGTGCTTACAAGTCAATACCAGCAGACAAGCTAAATACAATACATCAGTAATGTACATACAAATGCGAGAAACTCATAGAATAGTGCTCCATTAACAGGTGATTACTTGGCAATAAGACCAATAAATTGACCAGAAAAGGTACTGAATTTATCCCAAAGAAGGGGATTCTGGTTCAGAACCACTAATGGATGTGAAAGTGGATAGCGAGTCGTCACCGAAGTTCAATTGAGTAGCTGATAGCCTCCTTGAATCACTAAAGTATCTATTATAGTGACCAGAACACGATCTGGGTGTCAAAAGCTCAGGAGTAGCACCACCAAGAGATGATCTCCGGGGATTTGGAGTCATTAGTCCACTGGTAGTTCCACTTGAACGGTACCCATTTGTCCTTCTATTTAAGCTGACTGCCCTTTTTGGGCTTCCTTTAGATCCAAAAATAGCTTCTTTCTCTTTGAGTAGGATGCTCTCCAACTTCTTCTGGTCCCGGTATCGCCTCTTTTCCTCCTCCTTCTGCTCTCTGTTTAGTCTGTATTCTTCTAGAACAGATATTAGACGCCCCCCATCATAGAGGAAGGGCTTGTTTCTTGCATTTTCCCAAGCAAATGTTCGATTTATCAGGTTATCTACCATAGCTGGGATTTTGGTGACTAAAATCCGTGCCTTCTCTGCCCTTCTAAGGTTTATGTGAGCACCCCTTCCAGCACTGTACCTCTTTGAGTCCTGGTTGTATTCTTCGAGCCAAGCTTCTTCATCACAAGCAGAAATCCATTTATTTATCCTGTCCATGATATCTTTTCTGCTAAGGGATTCTTCTTTTGCTTTTAATATTTGCGATTCAAGCTTTGCCAGAAGCTCAGAAGGGTCAATCATGCCAGAGTCAATCATTTCATTAGTTTGCTCAGGGGCTGTACTGGCATCAGGTTCTATGTGTGCAGATCTGCATATCTCTTCTAACTCTGACCTTTTCTTCATGAAAATTTCTTTCAATCTTCTAGCTTTAAGTTTTGTTAACCTCTCAACCTCAGCACCCATCTTTTCAATTGTTTCCTGTGAGAGAACCCCGGGGGATAAGATTTCCTCTTCCGATGATATGAGAACACTAAGTACTCTGTTAAATTGTCTTCTCTCTTCTTGAGGGGAGTCCATTAACTTCCAGAGTTTACACAATGATTCCATTGTCTCTCTCATCTTATCGATTCTAGATCTCTGTTCTGCTTTTAGATTTGATATTGTATTAGCAAGGCCTTCCAGTGTGCTGTTGCTGATGTTTGTGGATTGCTCAAGACCATTCTGATGTAAACTGGGATGAATCCCATTTACAGTCTTCCCAAAATCAATTCCAAGGACTCCACACAAACAATGCACTTCATTCACATACTCCAGAACTTTGTGAAGGCGATCAGACTTTTCTTTCTGAAGGGCGTGAAGCTGTGCTTGGTAATTGTTAAGCTTCCTTGTTGATAAATCATTTTCATCGACGATGAGACTATTTGCTTTATCATCGCCATCGCTATATTCACTTAACTCCGAGCGGATTTTCTCGATCTGAGATTGAATGTCAGAAAACTGCTTGAGCCTCTCCTCTTTCTTGCCTTTTAAGTTCTCAAGTACTGGAACGACTGCCGCAAGTTGTTCTTTGAGTGGAACAACACTCTTGTCTTTCTTCAGATATAGCTTATGCTCCCCTAGAGTGGCAACCAAGGATGCAACTTCAGCTTCTTTGGTGGCCACAGACTGGTGCAGCTGGACCCTGGTCCGATTGGCATCGTCCACCTTCCTGCGGTACACTTCCAAGCATTCCCTCTCGATCTCTGACAGAACCTTGTTCTTCTCACCTTCACTTTCTCCTACCTCTGCCCAGATTTGCTGATTAAGAACCAAGAAACAGCAGCAGTGCATGAGTTATGGCAGGAATGCAAGTACTCCAATCCTTACGGTCAGAAGTAGTAGCAATCTTGGCATGTTACAGTTAAGGAAGCAGACAGTTAAAAAAGGGTACATTTTGATCATTAGGGCCTGATTCATGCACTCCCCCTGAGCATCTTAAATGGTAAAGGTACACAGTAATAAAAAGTACTACCAAGAAATTAGTACACTACAGTACAGAGAAACAAATAGTGATGTTCTCTTTAACAAAAGAGCTAATTTTCCCGCATCTTAACTGCCTGGCGCACTAACCTGAAAACGAATCAATAAATTGCTTTTTGTGCAGCTGAAGAACCAGGAAGGTGAAAAAGAGAGAACCTTACACCAAAAAAAAAAAAAGTTACTGCTTTGCAGCAAAAGAGACACCTAACAACAAAAACGAGGGCAACACAAACAGGAGGAATACTAACACAGAAAAAGAAAAAGAAAAGGTCTAACTTTTGTGCAACAAGAATAAGCTCAAGAACACTGAGCTCTTCAACATCACTGAAGAAACTTAGGCTCAGGGACAGTAAACAAATAGATATGATAGAAACCCACAAGGGTGCCAGAATCTGTAAATGAATCCCTACTGTAATATTTCACCAGTAAACGCGGTGAATTCTGAATAAACTCAGATAAGAAACACGCATAAAAGAACAATTTAACCAAAGGGAACCTGGAACCGTCACTCCAAACAGGAAGAAGAACCAGGAAGACACAGGCAGCATTTAGCAATATTAAGAACAGGAATTGCAGCCAAAGAAACAGAATTCTATTCTCACTCAAGAACACAGGCAAGAGGATACCTGAAGCTCCCTGAGCAAAGCACCACAGTTAGTAGCTTCCATACCAAGACCACCACCTACACCCATCATTTAACCAAGTGGAGGCCTCCAAGAACCAGCAAGAAACCACAGCGGAGAGGAGAGAAGAAGTGAAAGGAGAGGAGGCAAGAAGATTGGGGAGGCAATCAGGCAAAGCTTCAGGCTTCTCCACCCCTAGGCCCTAACTGCCTGAGGAAGCCATGAGCAAAGCTGCATCTGAATTATTTTAGCCTTCTACTCCATTTCTCCCCTCTTGGGATTAGAGAAGGCGGCAACAGCGAGCAAAAAAGTAGGCACCAAAATGCCAGCAACCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0440600.1 | 9 | 16855505 | C | A |
| Osa09LNT0440600.1 | 9 | 16856277 | T | C |
| Osa09LNT0440600.1 | 9 | 16856342 | T | G |
| Osa09LNT0440600.1 | 9 | 16857878 | G | C |
| Osa09LNT0440600.1 | 9 | 16858037 | G | T |
| Osa09LNT0440600.1 | 9 | 16858902 | A | G |
| Osa09LNT0440600.1 | 9 | 16858905 | A | C |
| Osa09LNT0440600.1 | 9 | 16859060 | T | C |
| Osa09LNT0440600.1 | 9 | 16859197 | T | C |
| Osa09LNT0440600.1 | 9 | 16860493 | T | C |
| Osa09LNT0440600.1 | 9 | 16855494 | T | C |
| Osa09LNT0440600.1 | 9 | 16856052 | G | T |
| Osa09LNT0440600.1 | 9 | 16860626 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0440600.1 | osa-miR5790 | Translation | 5.0 | 16.688 | 1 | 24 |
| Osa09LNT0440600.1 | osa-miR159a.1 | Cleavage | 4.5 | 15.822 | 1 | 21 |
| Osa09LNT0440600.1 | osa-miR159b | Cleavage | 4.5 | 15.822 | 1 | 21 |
| Osa09LNT0440600.1 | osa-miR159c | Translation | 5.0 | 15.822 | 1 | 21 |
| Osa09LNT0440600.1 | osa-miR1883a | Translation | 5.0 | 17.48 | 1 | 24 |
| Osa09LNT0440600.1 | osa-miR1883a | Translation | 5.0 | 14.562 | 1 | 24 |
| Osa09LNT0440600.1 | osa-miR1883b | Translation | 5.0 | 17.48 | 1 | 24 |
| Osa09LNT0440600.1 | osa-miR1883b | Translation | 5.0 | 14.562 | 1 | 24 |
| Osa09LNT0440600.1 | osa-miR2864.1 | Cleavage | 4.5 | 8.132 | 1 | 21 |
| Osa09LNT0440600.1 | osa-miR2919 | Cleavage | 3.5 | 13.575 | 1 | 19 |
| Osa09LNT0440600.1 | osa-miR5500 | Cleavage | 5.0 | 20.376 | 1 | 22 |
| Osa09LNT0440600.1 | osa-miR5501 | Cleavage | 5.0 | 7.885 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0440600.1 | 9 | qSB-9 | Resistance or Tolerance | Sheath blight resistance | C472 | R2638 |
| Osa09LNT0440600.1 | 9 | nan | Morphological trait | Panicle/flower | RM257 | RM566 |
| Osa09LNT0440600.1 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)