© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0441100.1
AGCCAGGCCGGCCTAAGATAGGCGGACCAAATTTACTTAAGAAAAGGGGTATTTACACATATACAAGTTTCAGACTTCGACAAGAGGCTGTCGAAGTGAAAGGATGTTGCCATCGCAGCAACTTCCTAAAAGAAAAACAAGTTACAGAAGGTTGTTACTCTCCTAAAACATTGAAAACCCCAGCTTCTTTCTAGATTGCCGCTTCATCTTTAATTGCGCCAAACAGGAACCCCGCTGTTCGGCTCTGAGCGTTTCTTTCCTTCCAAATCATCCAACAGACCAGCAGCACTAAAGTGTCAAATGCGCTCCTCTGGCTGGTTTGAAAGACCTGCCACCACTCCAACCACCAATCTCCAAGGTCCAATCCGAGCTCTGCCGGCAGCTGGAACCCGGCACCGATCCAACCCTTGATCTTTCTCCAGACATTTGAAGTGTAAGGACAGGAGACAAAGAGGTGCTCGCAATCTTCGTCATTGCTCATGCAGAGGGGGCAGGATTGTTGGTGTGGCCATCCTCGCTTGGTGAGATTGTCGGCCGTGAGACACCTCCCTCTCGGCCAACCACATAAAAAATTTCACTTTGGAAGGTTCTCTAGTGTGCCAAATCAGACTGCCACATCTCGCTTCTGTATTTGCCATGAAGAACAGTTCGTAAGCCGAAGCAGGGGTGAACTTCCCATTTGCAGCCCTCTTCCAAACAGTCACATCCTCCTCTCCCCCTTGCACCTGCACCTCCTGGACTGCATCCCAAATCTGAAAATACTCCCCGATGGCTCGATTAGATGGCGCACCTTTGATGTCACACACCCACCTGTGGTTCCTCAACCCCTGAGCCACTGTCAAGCCGGTGCGTTCCACATGGCTGAAAATCAACTGGAACCTCGATTTTATGCTTCCCATTGGCAACCAGTCCGCAAGCCGAAACTTCGTGTTTTTTCCATCTCCTACCTCTTGCCGTGATGCTGAGTAGTAGAGGTCTCTCAGATCTTTCGGCTCCACAGTCGCAACTGTTGTCCAAGGCCGGTCTTGCTGCTCACCCTTCTTAGCCAATCACTTGAGCCGAAGCGCTTTGCCAAAGAAGTCCAGGCTTTTTATACCCAACCCTCCCTTTTCAAACGGCATACAAACCGCTTTCCAAGCCACCAAACAATGTCCGCCACTCACCTCCTCCTGCCCCTTCCACAGGAACCCCCGACACTTTCTATTAATCTCTTTGATCGAACACTGTGGCAGCTCAAGCACCGAGAGGTAGTGCACCGGCAAGGCAAACAGGACAGACTTGATCAGAGTCAGACGATCTCCAGTAGACAGGAATTTTGGCTTCCAAATCATCAGACCATATAACTGAGACTGATGAATTGTGAGCGTGCAACTATCTCATAAACTGTAGGGATATGCACATATGATTTTCCCCCAGGACATTCTGAGAAAAAAAAAAGTACGAAATAGAAGTGTGGTACCTCAGATAATCTCCAATCAGTTGATTCCAGACTATTGCTGAAAAGAGAGGCCTGACATTGTAACATGTGCTCCCCATCTTTGGGCAATGAGTTTAAATTCAAAGAGATAAACAAGATGTTCATGTATCATGAATCATTTTAATTAGGAAAGCAGTCTCCAATGCTAATTCCTTGGTTTGCAAATACTTGCTCTCTTCTACAACATCTGTTGTCAAGTTGAGAATTACAGGCCGCTCTGGATCATAGCGAGTAACTTCTCGGACTTTTGCGACCCATTTAGCTGCTTCCCATACACCAAACCTTGTATTAAATGATGATGTCACAAACACTGCTGGGTAAGGAACATCCTTCTGGATGTTATCATAAGGAGAATACTTCCTGATTGAAAGGAACTCTTCATGGTCCACAGGAAATCCAAACTCTTCGTAATCAATAGCTGTAAGAGGTAGAATAGGGTGGAGAAGAGTATTGCAAACATCCAAGAAAGGGACCTTCAAAACGACAGCACGAAACAAATCGGGCCGAGTATTAATTGCTGAAGCCACCAGAAGTCCTCCAGCACTATATCCCCATCCAGCAAGTTTATTTTCTTTTATGATACCCTTCTCAAGAAGAAACTCACCACAAGAGATAAAATCATATATAGAATTCATCTTTTTTGTACGTGCACCATCTTGGTGCCACTTCTTCCCATAACCTCCACCACCCCTGACATCAGCAAATGCAATCACCCAGCCACGATCAAGTAGGCTCTTTAACTCACTGCGCCAGCGCTTATCCAGAATCTCACCATAAGCACCATGTCCATGAAGTAACCCTGGATTTCCCTCTTGCTTGTGCTTTTGCGAATATACTAATGTAAGTGGAACCAAAACTCCATCCTTTGATGGAACATCATAGTACTCACAAGCATAGTATTCAGAGAGTTCATTCCAATCACAATCTCCAAAGTCCTCACTTGACAAATCACCTCCTTTTGAAGATGGCTTAACCATACTAGCAGCAAAAGCATTCCCATATAGTGCTTTCGTTCTTTCATGAAGCATGTTTTGCTGTTGCACTATTCGCCACTTACCATTCGGTAAGTTGTAGTCAACAACTGCATCAGGCATCACAGGTGATGATATTGTGAAACGCATTGTTGAGGAACGATAATCGTAATTTGGGCCAGGTAAAATCTGACACACATGATTTGGAAGAGACAAGTCAAATGGATGGAAATCTGACAGACGAGCAGGTACTCTGATGTGTTCAGGGAAAGGTAACTTTACTGAACAGAGCTTCAGCTTTCTGCCTTGTCTCAGAACAAGCACCATGTGAGTATCACAGAAGTCAACATCTTCAAGAATAACGCCTGGTTCTTCAAGAAAAACATCCTTCCAGCTCTTCGGCCCAGGAGATTCCACATCAGACAGCATTAGATAATGAGAATCAACAGGGGTGCCTTCTCTTGAAGCATCAGTAAATAAATATAGGCGTCCATGATGGTGTTCAACAATACAATGAACTTGGGATTCACCTTCCCAAACCAATCTCATTCTGGACAGGGGATCAGAAGCATTTATCAAATATACCTTTGAGTGAGTGTCTGAAAAAACATTTAACGTTATGAACCGAAAATCCTTGGTATGTCTGATATTTAAATAAATATTCTCATCAGGTTCTTCCAACATGAGAACATCATCCTTGCTGGATCCAATAATGCTGCAAAACAGCCGATATGGCCTCCTATCCTCATTTGTAACAATGTAAACCAGTGCTTTCCCATCCATAGCCCAGGATATGTTTGAGACCCGGTCAGCACGAGGTTTATCACAAAGAGTTCCTGTCACTAGGTCCCTGACCATTAAAGTGAAGGAATCCTTATCTTTATCATACATAGTGTATGCAATGAACCGGTGATCTGGGGACACTTCAGACAGTTCCTCGTATGAGTATCCTCCGAACCGCTCGGCCTCCTTGTTGTAATCCACCAATTTCTGCTCGATGCGCTTCCCGGCGGTGAAGTCGAATCCGGCAGAGGGGTCGCTATACGAGATGAACTCGCTGTGTAGCGCCGCGGAGCGGCGGCAGAGCACAGGGTACTGCTTGCCCTCGTCCGCGCGGCGGTAGTACAGCCAGGGTCCCCAGCGGACGGGCGGCGTGCAGGCGTCGGAGGCGAGGCGGGAGGCCATCTCGAGCTGGAGCTTCCGCGCGAGGCGGTCGGCGCCCGCCGCGGCGAGGCAGGCCTCGGCGTACTTCTCCTCGGCCTCCATGTGCACGTCCATGTGGCGCATGGCGGCGGCGTCGGAGAGGGCGCCCATCCACGCGTAGCTGTCGTGCCACGTCTCCCCGTGGATGGAGACCGGCTCGGGCTTCTGCGGCGGCCGCGGCGGGGTCGGGGGCGGGGGCGGGGGTGGCGCGGTGGCCGGCTTGGAGCGGCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0441100.1 | 9 | 17017371 | A | G |
| Osa09LNT0441100.1 | 9 | 17017964 | T | C |
| Osa09LNT0441100.1 | 9 | 17022865 | A | T |
| Osa09LNT0441100.1 | 9 | 17017162 | C | T |
| Osa09LNT0441100.1 | 9 | 17017649 | A | G |
| Osa09LNT0441100.1 | 9 | 17017779 | A | G |
| Osa09LNT0441100.1 | 9 | 17018711 | T | C |
| Osa09LNT0441100.1 | 9 | 17018978 | T | C |
| Osa09LNT0441100.1 | 9 | 17021541 | A | G |
| Osa09LNT0441100.1 | 9 | 17022403 | T | A |
| Osa09LNT0441100.1 | 9 | 17022691 | C | T |
| Osa09LNT0441100.1 | 9 | 17022713 | A | G |
| Osa09LNT0441100.1 | 9 | 17023409 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0441100.1 | osa-miR5542 | Cleavage | 3.5 | 10.163 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR5822 | Translation | 4.5 | 24.777 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR6246 | Translation | 5.0 | 10.551 | 1 | 23 |
| Osa09LNT0441100.1 | osa-miR395t | Cleavage | 5.0 | 11.969 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR398a | Cleavage | 4.5 | 20.018 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR398b | Cleavage | 5.0 | 20.018 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR440 | Translation | 3.0 | 20.018 | 1 | 24 |
| Osa09LNT0441100.1 | osa-miR528-5p | Cleavage | 3.0 | 12.421 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR528-5p | Translation | 4.0 | 14.384 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR444b.2 | Cleavage | 3.5 | 22.591 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR444c.2 | Cleavage | 3.5 | 22.591 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR444f | Cleavage | 3.5 | 22.591 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR1435 | Translation | 4.5 | 19.844 | 1 | 20 |
| Osa09LNT0441100.1 | osa-miR1435 | Translation | 5.0 | 16.132 | 1 | 20 |
| Osa09LNT0441100.1 | osa-miR1439 | Translation | 4.5 | 18.375 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR1860-3p | Cleavage | 4.5 | 17.778 | 1 | 22 |
| Osa09LNT0441100.1 | osa-miR1861n | Cleavage | 4.0 | 20.764 | 1 | 22 |
| Osa09LNT0441100.1 | osa-miR1320-5p | Translation | 5.0 | 13.974 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR1320-5p | Cleavage | 5.0 | 16.809 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR1846e | Cleavage | 4.0 | 13.478 | 1 | 20 |
| Osa09LNT0441100.1 | osa-miR2929 | Cleavage | 5.0 | 17.545 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR2929 | Cleavage | 4.0 | 17.619 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR5338 | Translation | 5.0 | 18.546 | 1 | 21 |
| Osa09LNT0441100.1 | osa-miR5518 | Translation | 4.0 | 18.47 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0441100.1 | 9 | qSB-9 | Resistance or Tolerance | Sheath blight resistance | C472 | R2638 |
| Osa09LNT0441100.1 | 9 | nan | Morphological trait | Panicle/flower | RM257 | RM566 |
| Osa09LNT0441100.1 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)