© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0041400.1
CCATAAACTATCATGTTTGATCAACTGAAAAAAATTGTCGAAGACAAGTTCAGCTTAATCTTTTACATGGTTTATGATGTACAACCATACGGCTGAAATGCGAAGCTCAAGATGAGTTAAGATTGCTGGTGAAAACTATGTACAAATATGGCGTTAGCTAATGACGTTCTCCTTTGTATCTTCATGATCAAAAGACACCACTGCAGCTCATCGAAAAATTACCTGATGAGTTGCCACTTGCACGGAGAAAAAATGAATCGCACCACAATGCCACCTTTAACTACAAAATCTGAGCACCTGTACAAACTAGAAACACTAGACGCCTAGAGAAATGCTATCTCCTGACAGATATTTCACCTATAGATGCAAGTTACACCATCCCACGAGCAAAATTGTGTCCAATCTCAGGAGAAATGCTAAACCATAAACAAATAGTTCAAGTCTTCCACCGTCAATCTAGTTTGATGGGCACCAGATTTGTCTTCCCCAAATGCAGAAGCCACCATCTCCCGTTTTTTCTCCTGGAGAGCCAAAATACGATCTTCAACGGTATCTTTTATGGTTAACCGTGACACTGTGACAGGTCGAGTTTGGCCAATACGATGCGCTCTGTCAACAGCTTGGTCTTCTGTAGTAGGATTCCACCAAAGATCAAGCAAAAGTACATGACAGGCCGCCACCATATTCAGACCAAGACTTGCAGCTTTGAGAGACATAATCATAACAGAAACCTCTGGATTTGTGTTGAAGTCTTTTACAGCTCTATCCCGAGCTGCGACGGACATTGTTCCATCAAGCCTCCGATAAGATAGATGAGAAGATTTCAAATGAACCTCTACCAAATCCAGCATTCTAGTCCATTGAGAGAAAACGATGGCCTTCTCAGTTATTTTGGTGCCAGCATATTCAGAGGGAGTACTATTCCCGTTAATTTTGTCAGGATGCACAATTTTATTTTTGTCATCACTCATATGGGTTAAATCCAGTTTAGGCAACGAGAGAAGAATATCCAGGGCAGCTCTCACTTTGGAAGATGCATAAGACGAATCAAATCTAGGTTGCTTCCCTTGCACCATGTCTTCACAGGAATCATCAGACAGAAACTCACAGGTTGATCTACTCAGAGCACATTCAAGGGTGCCTCGGGAGAATAAGGAAGTTGAATTTAGTCGGACTCGGCAATTGGACACTGGACATACACTGTCATCACCGGTAAGTTGCTCCAGTATGCACTGGTTGCAGAAAACATGACCACATATAGTAACAACGGCATCTTCTGGCGCATCATTGCAGAGAGCACATATCGCAGAACACGATTGCAAGCAAACCAGCAACGATTGCTGCCTTTCTACAGGCAGCTTCTTTGCCATCTCCAATGAAGACATCCAACTAGAAGTAGACTCATGACCTCGAACTAAGTGAGGGTGATCACATGCCTGTCTGAGCCGTAAAAGCATCAGCAGGATATTGACGTAGTTTTGCTTGACAGTACCAGCAGCTGCATACTCCTTGAACTGCTCTCGTGATTCTGCTTCGAGAGTGTTATAGAAAGCACGCTCTTCACTAGTGAAGTCCACTGTCTTAAGAGAGACGGTCTTTGGGGGTAATGAGATTATTGGTTTTCCATCAAGCATCGTTGCTTTTGTCCTCCTCAGCATTACTGTCTTCAGAACAACCTGAAGCTTCTTGTACCCAGTAATTGGGTTCCTGCTGATTGGTGTTTTTATCATGAAGCAAAATTTTTTGTATTCAGCATATGGATCATATCTGAGAAATCTGAAATAGCTATAGAGATCCTCAACAGCATTCTGTATAGGTGTCCCTGACAAGCACCATCTTCTTTTGGCTCGCAGACCCCAGCATGCCCTAGCAACCTGGGTTCGATAATTTTTAATACTTTGTGCTTCATCAAGGATAACTCTAAACCATGCAACTTTTGCGAGAGGTTTCTCAGGCAATTTACTCTCTGGTGTGCTTCCACTTTTGTTCTTCTTAGAAGAGGAAGTCTTCCGTTTTTTGCTGCCTGAGGAGCCAACAGGAGCACCATACCTGTCAGGCTTCCCTTTCTCTTCATCATCACTATCAGGACTTGATTGTTTTGGTACTTCCATGCTTACTATAGAATATGTGGTTAACACGACATCGTATTTAGTAAGATCATTAGGATCCTTTGTGCGGTTGCTACCATGATATACTAAAAAGGTCAAGTTAGCTTTACTGGTGACTTTATTCCTCAGTTCATCTGCCCACTGACGTAGAACACTCGTGGGGCAAACAACCAAAGTCCCAGCAGCTGGTCTAGCCTTAACATTTGCAATAGGATTTTCTGTCTTAATGGTACTACTTGTCGCTTCAGGTTTACATGTATCTGCTAGATGTGCTAGTGCCGGTTTCTTCAAATGAGGCTCAGCATCGTCATCCTCATCGTCATCGTCAAGGGTTACAGCTTCGCATGGTTCTTGCTTAACAGCTGAAGATGGAACTGGTGACCTTTCTGTCAAAATCAGTGATATAGTCGACACTGTTTTACCCAGGCCCTGATCATCTGCAAGAATTCCGCCAGAGCAACTCGAACCATTTCTCTCCTTTTGTACCATCCATGACAAGGCAATTTTCTGGTGCCTCAATAAAGGAACTGCTAAAACTCCATCAGGTGGATTAGCCTCAGACTTTGGCTGAGAAATATCCTGCCCATCATCCAATTGGTTAAGTACATTGAAGAAAAACTTACAAGCAAACTGGATGCAAGAGGTGCATCAAGTAATGGCTAAAAAAGTATCAACACATACAGCATAACACAAGGCTAACAAAAAAAGGGAACTAAATGCCACATATATATCACATGAAATAACATTCACAAAGTCACCAGTTATATCCAATGCAGACAAAAGGTCAAAAATCAATGTTTAACAGCATCACAGTGCAGAAAAGGTTGAAAACATAAGCACCAGCAGTTATCTATACTCTAGTGGTGGAGGTGGTTCTGCCGCAGCCCACCACTACTAATTTTGCATGTTTTACAAATTATTCCCTGATATTTTCTGATATATGCAATAATTTAATATTTGTTTGATTTAAGTGAATAACATATATTGTAATAAGCATTGGAAAAGCAAAGAATGGGAATTTTACCCATAGAAAAGCATGGACATTTTGCTAGTTAACACAAAATGGTCTTCTGTTTGCAAGACAACTACAGAAAATATATAAGGCAAATATCTTCATAAGAAAATCATACATTCTCCTCTGTTTTAGTGACCAGAAACATGATAACAAATCAAACCTCAAGCAGTTTAGTTGCCTGTTCCTTTGGGTTAGGCAAAAAAAGGGACTAAAAAAGGTTTAAAAAAAACCACCTTGTTTGTTTATGGTACTTCAATGAGCAAGTGCCGCCAAGAGTAAAAAGGGTAAATTACCTGTAATGCAAGCCGCAAAGTCATTCTTTCCTCATGCGGCCTGTATCTCCCTCCAAACCGAGGAAGATTAGGATTGGCACACACAGATTGTTGAAAGTTATGCTGCAATCCTTGGGGTGGCAACACATGTCCACTAGCAAGACTTCTACTACCCTCAAGAATACATAAATCAGAATCACGATTGCTATCTAAACTGAAGCAATTCCTTGATGAGTTACCCAGAATAGAAGAGCTGCCATTTCTAGGAATGTCATACTTTTTATGAAAAGTTGGATGCATTGGATCACTTGAGTTCATGAATGAGTGTTGGTGTTGGGTACTGACAGGAAACATGGAATTCTGCAAATGTTTTGGTGCATCTCCAAAGTATTTATCAGCATCCTCAGTGGTGGAGTTTCTGCTTGAGGGCACCGGAGAAGAGTCAGTGCTAGACTCACTCCGGAAACAGATATCTTCTGATCGGTTCTGCTCGCTGGACATCGACTCTATCGAAGATACATCATCCATGTAATAATCCGACAGAGATGTATCATCACAATATTGATCTGGAGAGCCCACTTGCATTGAACTGCTTTCACATATATTCTGTGGTAATTGTTCCAGCTCATATGACTGATTGTTTTGTGGCAAATCATGCAGCACTATTTCATTAGCCATATCAAACGATCCATAATCTGGCTGAGGATACTCCTGATACTCCCCCTGCAGATATTCTCCTTGTACAGTTAGGCAACTGCCATTTCCATTCTGCATGCTTCCAGGCACATCACCGATGTTCAACTCGGTGTAAGGAATATCAGGTATAACAGCACTATGGTCAAACATAGGCACTGACGTGAAATGGTTACCCTCCTGCTCAGAATTACCAAGCATGGGACCTGTGCCCTCACATTTAACTTCACTTAAACCAGATTGCTCTGCGAACATATCACATCCCGAATAAGTATTAGTGTGTGGCTCCAAGCCCTCAAAGTTGTTATCTACTCTAACTTGTGTATTGTCGGAGTGCATAGAATGCTGACCATAGTATAAACCATTTGTATAATCTTCATATGGAGGGACAATTTCTTCATCAACAGTTTTAGCATGGTTTAATGCATCCATTGGTAAATGCATCTCAGGATTACCATTCCTTGAATTTTCCAAAAAATCATTGCTAAGCAATCTATAAGAGGTATCCTCTGAGTGATCAAAAGATTCTCCACCATTGTTAAGTTCCACCATTACATCCATCTGACTATGTGAAGGATCTGTATGCGAGTAGTTTGACCAATTTTCTTTATTCTCAAAAATTTCTTCATGGTTTTGAAATGCATTTTCAGAACTTGTGCTGTCCACTGGCATCTCTAAACCTTGATTGCCCTCGTGCTGCTGCTCCTTCCAGTCCTCGTTATCGAGGAAGGCCATGAAGTCGCCGAGGGGCATGGACAGGTTGTCCTCCCCGGCGCCGCCGAAGCCGCCATCGAAATCCGCCGCCGCCGCCGCCGCTTCCTCCATCACTCCTTACCCTCGACGGCGGGCCTCGATCATCCAAATTCGCCGCGGGACAGGGGCGGCTGCGTCCTTCCTCCGCCTAGCCGAGCGGAACCCCCCTTTCCCCCTCTCAAACAGGGTCGCGTGGCGGCCGCCGCGCGCTAGGACGAAGACGACGAAGATGCCATCCGCGTCGTGGTGGTGGGGGGTGGTGGTGGAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0041400.1 | 1 | 33001945 | A | G |
| Osa01LNT0041400.1 | 1 | 33001478 | T | C |
| Osa01LNT0041400.1 | 1 | 33001983 | A | G |
| Osa01LNT0041400.1 | 1 | 33003861 | G | A |
| Osa01LNT0041400.1 | 1 | 33003948 | A | T |
| Osa01LNT0041400.1 | 1 | 33003995 | A | T |
| Osa01LNT0041400.1 | 1 | 33005596 | G | C |
| Osa01LNT0041400.1 | 1 | 33005877 | C | A |
| Osa01LNT0041400.1 | 1 | 33005997 | T | C |
| Osa01LNT0041400.1 | 1 | 33006230 | C | G |
| Osa01LNT0041400.1 | 1 | 33006255 | C | T |
| Osa01LNT0041400.1 | 1 | 33006832 | A | G |
| Osa01LNT0041400.1 | 1 | 33007139 | G | C |
| Osa01LNT0041400.1 | 1 | 33007467 | C | A |
| Osa01LNT0041400.1 | 1 | 33008512 | T | C |
| Osa01LNT0041400.1 | 1 | 33009173 | A | C |
| Osa01LNT0041400.1 | 1 | 33009480 | A | T |
| Osa01LNT0041400.1 | 1 | 33010098 | A | T |
| Osa01LNT0041400.1 | 1 | 33010195 | C | G |
| Osa01LNT0041400.1 | 1 | 33010206 | C | T |
| Osa01LNT0041400.1 | 1 | 33002826 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0041400.1 | osa-miR5532 | Cleavage | 4.0 | 12.197 | 1 | 22 |
| Osa01LNT0041400.1 | osa-miR6247 | Translation | 4.0 | 19.37 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR818f | Cleavage | 3.5 | 22.19 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR394 | Cleavage | 4.0 | 19.363 | 1 | 20 |
| Osa01LNT0041400.1 | osa-miR395a | Cleavage | 5.0 | 20.882 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR399a | Cleavage | 5.0 | 15.06 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR399b | Cleavage | 5.0 | 15.06 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR399c | Cleavage | 5.0 | 15.06 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR399d | Cleavage | 4.0 | 15.06 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR399h | Cleavage | 5.0 | 15.06 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR399i | Cleavage | 3.5 | 15.06 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR399j | Cleavage | 4.0 | 15.06 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR166i-5p | Cleavage | 4.5 | 12.26 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR439a | Translation | 4.0 | 16.723 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR1424 | Cleavage | 4.0 | 12.42 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR1857-5p | Translation | 4.0 | 21.885 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR2101-3p | Cleavage | 5.0 | 11.825 | 1 | 22 |
| Osa01LNT0041400.1 | osa-miR2101-3p | Translation | 5.0 | 13.432 | 1 | 22 |
| Osa01LNT0041400.1 | osa-miR396f-5p | Cleavage | 5.0 | 19.478 | 1 | 22 |
| Osa01LNT0041400.1 | osa-miR2922 | Translation | 5.0 | 15.474 | 1 | 20 |
| Osa01LNT0041400.1 | osa-miR2931 | Translation | 3.5 | 19.715 | 1 | 20 |
| Osa01LNT0041400.1 | osa-miR5497 | Cleavage | 5.0 | 15.972 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR5497 | Translation | 4.5 | 12.267 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR5498 | Cleavage | 3.5 | 15.668 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR439b | Translation | 4.0 | 16.723 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR439c | Translation | 4.0 | 16.723 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR439d | Translation | 4.0 | 16.723 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR439e | Translation | 4.0 | 16.723 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR439f | Translation | 4.0 | 16.723 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR439g | Translation | 4.0 | 16.723 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR439h | Translation | 4.0 | 16.723 | 1 | 21 |
| Osa01LNT0041400.1 | osa-miR439i | Translation | 4.0 | 16.723 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0041400.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Osa01LNT0041400.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0041400.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0041400.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0041400.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0041400.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0041400.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)