© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0443200.1
GGGGGGAAAAAATGCAGTGGACCGTAATAAGAAAACTAGAATAAATTATGAAATGAGTAACGACCAACATAAAGAGCGTATATACAGGTTGGTGATCTAAGACATCTAACAGACCTAACAAGATTTTCTGCTTGGTTACATTTCTAAGAGTTACAACATCAAAAACAACATTCTTTCGTTCAGATACAGAAAAGGCACTCATGATTGGCATAATACAACAAAACATATAAAACCAAGCAAAATCAGACACTCCCAAGCTACCTTCAGTGAAGGACTGAGCCACAGGAATGTTGACTGTCGAGTCCTCTGTCCGCCATCAGCAGAAGGGAAAAGTGAGTAAAAGCCAAGTCACGAGTTACAACTTACAACTCACAACACAGACCAGAGGATCGTCCTAATACAAAGTAATAGTACAGAGTTCTTTTATCCCCACTAGAAAAGAAATTAAGCAGAAAGCTACTTAGGGGAATCACAATACATTTGACAGTTTTTCTGGCAGTAAGCTACTTGAGCACTATATTATGGTTAATGGTAGGGGTGGGCAGGCAGCAGCTACATCTTGAATTAGAGGAAGGCAGGAAGTTGAAGTCACAGCCGCAGCTACATCTTGTTATTCCAACTGCTTTTATTAATCTCAATTAATGCTACAACAGATCCTTGGAGACAAGCAGGTAAAATCCACCGATGTTATAAGCAGTAAACAGTTGACAGTTGCAAGCTGATTCGCTAACCAAAAGGCATGTGCAAAAAAGATGCCGCCGCGAATTGCCGATACCCCTACACTAAACATAGCCCATCCAGATACATTACTCAGGCGACATCCGCCGCCGCTTTGAGTGGTCAACCTCCCTTGATCTGCTACGCCTCCCAGATGATCTTCCCCTATCCCAGTCTTCATTACGATCCGACTCACGCTTCCCGTGCCTATGATAATCGCCATGGCGATCTCTATCATCCCGGTACCGTTCCCTCTCCCTGTCTCGATCTCTTTCCCTTTCCCGTTCCCTGTCTCGGTCTCTTTCCCTTTCCCTGTCCCTGTCTCTCTCCCTCTCCCTCTCCCGACCTGCGTCCCGTTCATCACGGTGCCTCCTCTCTGGCCAGTCTGGTGGAGGAGGCAAATCTTTCTCCCTCTCCCGCCTCCTATCAGATGCCCCTGACCATTCCCTCTCTGGTGGCCTCTCCTTACCATGGCTCCCACCTTCACCATATTGTTGATCTGATGCTGCATCGTCGCCATAGCTTGATTGCTCTTCCCCACCCCAACCACCCATGCTCGGGTCTGGCCACATCCCGACCCCACCAGCACCCATACCACCTCCTCTTCCAAAGAACGCTGGGTTTACATGAGGTGCAACAACAGGTGGGAATGGCTGCATTAAGCCTGGGAATGGAGCAGCCCCAGGTCCTCCAGGGAAGCCACCAAACCCACCACCCATCCTCCCCATTGCTGCACCATAGCCAGTTGGATCAAAACCCTGCCCTAACATGCCTCCAGGATGAAGCATAGGTGGTGGTGGAGCTACCATCCCTCCGTTCCCCATTAATCCACGTCCACCAACCGGACCCATCCGATTCCTCATATTCCCAGCTTGGCCTCTACCCCCCATACCCCCGCCACCCCTTCCCCAATTTCCACCGCCGCCTCCACCTCCGCCACCACCCGGTCCACCTCCTCCGCCTCCACGACCACCACCATAATTCCCACCCACCTGAGCTCCACCCGGACCTCCAGCTGCACCACCACCTCTACCACCCTTCTGCACACCCGAGTTTTGCTGAGCCATCGATTGTTGGTTCTTCACCTGAGCTTCACCCATGCGGCGCACGGTGTGAGGCGAGGCGAAGGCCACGACACAGGGGCGTCCATTGAACAAGTGGCCGTTCATGCCCTCTTTGCAAGAGGCAGCAGCGCCAGGGTCATAGAAATCAACCTGGCAGTATCCCTTGGACTTGCCGCTCGCCTTCTCGTCGAAGAATCTCACCTCCTTGACCTGCCCGTACTTGCTTAGCTCTGCCTCTAGATCGGCGTCCGTGGTCCACCAGTGGAGCTCCCCTACGAAGAGGGTCGTACCACCGGGGCCATCACCACCCCCGCCGTTGCCGACCACAATCGGGCCCCCACCGTAGTTTCCCCCACCCTGGCGGTGGAAGCCGTCGCCTCCTCCCGGCTGGATCTGGTTATGCGGAGGCGGCGGAGGCGCGGCGGCCACCGGTGGCTGCGGCTGCGGCGGGAGGTGGACCGGGTTGGGCCGGTCGGGAACGGGGGCGGGGGGGACAGCCGCGACGCCCGGGATGTGCACCTTCTCCGGCTGCCGCTGCGGAGGCGGCGGCGGGAGCGAAGGGGGCGCCTGCAGCTGCTGCTGCTGCTGTTGCTGCTGCGGCGGCGGCGGTGGCGCCTGCAACGGAGGCGGCTGCTGCGAAATCGGCGGCGGCTGCTGCTGCTGCTGCGGCGGGGGCGGGGGCTGGGGCGGCGGGTGAGACGACTGGAGGAAGCCGTCCCCGACGTTGACGTCGTTGTAGAGGTCGTCGTAGTCGTCGTCGTCGCCATAGTACTGGTCGACGTCCTGGACGGCGGAGATGGCCTCGTTGCGGTGGAACGAGCCGTCGCCGTCGGGATCCATGGCGGCGGGCGGCGGAGCCAAACCCTAGGAGGGGAGGGCTGGATCTAGAAGAGAGGGGAGAGAGCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0443200.1 | 9 | 18243389 | T | C |
| Osa09LNT0443200.1 | 9 | 18245176 | G | A |
| Osa09LNT0443200.1 | 9 | 18241859 | T | C |
| Osa09LNT0443200.1 | 9 | 18242164 | A | T |
| Osa09LNT0443200.1 | 9 | 18242524 | C | A |
| Osa09LNT0443200.1 | 9 | 18244026 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0443200.1 | osa-miR5821 | Translation | 4.0 | 20.627 | 1 | 21 |
| Osa09LNT0443200.1 | osa-miR1861o | Cleavage | 5.0 | 19.171 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR156c-3p | Cleavage | 5.0 | 19.756 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR156j-3p | Cleavage | 5.0 | 19.756 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR166c-5p | Cleavage | 5.0 | 17.744 | 1 | 20 |
| Osa09LNT0443200.1 | osa-miR166d-5p | Cleavage | 5.0 | 17.744 | 1 | 21 |
| Osa09LNT0443200.1 | osa-miR168b | Translation | 4.5 | 13.855 | 1 | 21 |
| Osa09LNT0443200.1 | osa-miR1861a | Cleavage | 5.0 | 19.171 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR1861b | Cleavage | 4.5 | 19.171 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR1861f | Cleavage | 4.5 | 19.171 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR1861h | Cleavage | 5.0 | 19.171 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR1861i | Cleavage | 4.5 | 19.171 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR1861j | Cleavage | 5.0 | 19.171 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR1861l | Cleavage | 4.5 | 19.171 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR1861n | Translation | 4.5 | 19.171 | 1 | 22 |
| Osa09LNT0443200.1 | osa-miR5339 | Cleavage | 5.0 | 10.475 | 1 | 21 |
| Osa09LNT0443200.1 | osa-miR156g-3p | Cleavage | 5.0 | 19.756 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0443200.1 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Osa09LNT0443200.1 | 9 | qSB-9 | Resistance or Tolerance | Sheath blight resistance | C472 | R2638 |
| Osa09LNT0443200.1 | 9 | nan | Morphological trait | Panicle/flower | RM257 | RM566 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)