© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0443600.1
GGCAGTGCAATTTATTTCCATAATCATTTTACAAGGCATCGCTTCCCATTTTAGGACCTCAAACTATTGGTAACAGGAATGCCAACATTACAAAGCCAATTGAAGCTAGTGTGACTGGTAATGGTATTCTCCCCTTATCCTTTCTCACAAACATTGCCTCATAAATTGGGATATTAGTGATCACTATCAGTCCACATAGAATGACCTGGGGTAAAAACACATTCCACACACCTGCCATTATTTTGCTTAGCCCTGCAACTAGGCAGACGAAGTTCAGTAATGCGACAGTTGCGATGATCACAAATTCAGGAGATGATGACCCAAACTCAAGGATTTCTTGCTCATACCTCTTTGCTTCATCGCCATCACTTACCTTTGCTGTAATTTCAAATGACATCTTTGACAATCCTAACAATTTTCGGATGGTGTCAATGAAGCCATATAGATATGAGGTAATTCTTTTCACCATCCACATCCTTTGTCCATTCCACCATCCTTTCAATGTATCCCCAGATAATAATGCCTCATAAAGACTGTAGAGGGTCTTCACACAAAATACATATATGAAGGGTGTAGCCCATGGACTCATAATCTCTGGAAATAGGGGAGTGCCTTTGACAAGACCTAGTGCTGGAATCATAACATAGTAGATTGTAGGCAGTGAATTGGCTGCCCATAATCCATATATGCAGTAGCCCATCTGTAACTGCAAGCTGATTTTTCCATGTCCAAACAGGAAGGTGTTGTGCTTTGAAAGAAAAATTGTGAAATTGCCCTCACTCCATCTCTTGTGTTGCAGTATTGTCTGGGCAAGTGTTGCTGGAGCTACACCCACAAATGCTGCCCTTTGAGGTTCCATGTAGACTGACTCCCATCCTCGGCAATGTATTGCCAATCCAGTGATGACATCCTCTACTGGGCAACCATATTTCACTCCAATCTCATTGCCCCATTGTGTCCTAAGTTCATAAGTGCAGGTTGCTAAAGATTTTGCCTTCTCTTCAATCTCATCTATGTTCTCATGTCCTCTTTCCTTTATTCCTCTGCCCCAGTCTTCCTTGTAATCTTTGCTGAATTTCTTACCACAAAGGATCTCTCTTCTATGGAAGCATCCTGTGCCAATATAGAGACATCCACCAGCACTGTCCAAACCACGCATCTCCACATGATTGATAACATTGAGAGAGTTCCCATATATATTATTTTTGGTCATATTGTTGTAGTTCTGAGGATACTGGACAAATCCAATTTTGTGGCTCATTTCTTCATCAAGGAAGAAGCACAACGCATCTCTGATTGAATCACTATTGTTGGAATACATGTCACAGTCCACATTCAAGATAACAGGGCTGTCACTTATCAGTGCTGATACCCTTATCAAAGCGTTCAATGCCCCGGCTTTGAAGTTATGGTGATACTGAGGGCTCTTCTCGCGCGCCATGTATACCAGTGTTGGTAGCACATTTCCGTCGTCATCAACTGCATTTTGGCTTTTCCCATCTATCAGAACCTGAACAATTGGCTGGTGATTTTTTGAGGTCATTTCCGAGTTCCATTCATCAAATCCTTTATGCTTTAGTTTAATTTCTTCAGGAATTTTTCCTGACATGACAGCCGAATCAATTCTCTCTCTCATTTCTTCATACAGGTTCTTGATAAATGACCATTCTTTTGGGGAGCACAGATTGTGATGCCCTTCTGATTCCGAGAAGTAAGCAGCTGGGGACCTTGGCTCAATGTTATATCTTCTGCAGAATGGTAGCCATTTCTTTGCAAACATGGATGCCTCCCATAGAGCGTAGAAAGTAAGAATTGAACCACCATCATCAGAAAGATACACACTTATTTTTTCTGATGGGTAATTGTATGCCATGACTGATAGGATGGTAGAGATGACAAGGCTTGGTGGCTCTGCGTGTGGGTCTGCAGTGCATACAAAAACATCCACACCAGGTAGATTTTCTTTGTATCTCTCGGCGAGCCTGTTCTTGAAGGTGCGGCGGCGGACGGGGCACCACCGGACGGACTGCGTGATGACCCAGTAGACGGCGAACCAGAGCTCCGCCGCCGCCATCCCCAGCCACGCCGCCCGCCCTTCGCCGGCGGCCGGCACGCGCGTCGCCCTGTAGTAGAGCACCAGCAGTATCCCGGCGGCCACCGTCGCCGCCTGCAGCCTGTACACCGCCCTGCCGCCCACCTTCTCCGTCGCGAACAGCCGCCGCCTCTCCGTCGTCGTCGTCTCCATCGCCGGCGGCTAACTAGCTACTCTCTCTGTGTAGTGAGCTCGATCTTCGCTAGCATAGGATCCGTAGTAATATATGCATATATAGCTCGATCGATCACTAGCTGACAAAATGGACTAACCAATTCTGATGCACAGATATGTGCATATATAACGTCATACTATATAAATTGTTTTTTACTAGAATATATTTTATATAGCATATATCTTTAGAAGCCAGGTTGATGAGATTTGGTTGTGGTGCTGTGTCAGCCACTGGAGCACGTGGTCAGGGAGTGTTTTATCCAGGACCAAATGTATGGGAGACGATTATTGAGTGTCTTTGGATTGATGGTCCTTTACACTTTGTTTCTATATAATTTTTGGATACTAGCCAAGAGTTTGTGCGTTGCAACGGAAAATAAATTGTATTTCTAGCTTATTAAGTTAATTAAGTACATATTTAGTCTAAGTGAAGAATTAGGTGAATTGTATGTTGTCTTTCCTTATTGCGTAGTACTCCTGCACATGGGAATTTAAGGAAGGAAAGGAATGCGGAGGACAGCTGATAAAAAAATAGTAGAAAAGGAAAAAAAAAGACCCTCCTCTCCACTTTCCCTTCCCCTCGGTTTCTTCGGCAGGCCAGCCCCTCTACCAGCTGCCACCGTGCTGCCCCTCCTCTCCTCCTTCCCTAGCCGGCACGCAGCGAGCTCGGGTCGAGGTGAGGAAGAAACCGATCGACGCGGCAGCGAAGAACCTAGGGAATGGCAAGGAAGAAGCCAAGGCGACCCCCGTTGCTCGGTGGTGTTTTGGCGACAACAGTAGTGGACAGCGGTTCCCTCAGGCGGCGCCGAGGATGCCGAGCCTCTCCACAATGGGCATTCCCCTCTCATGAAGAGCAGAGGACGCTGATGAGGAAGGGGAGAGGGCACCTTGGAGGGAGAAGAAGGGCGAGGGATTGAGGTTGACGGGCACCCCGCCGCCAGATTCAGCTAGCATGTACCTCCCGGCGACACTAGCCCTCGATCAGGTGGCGCTGGCCCTATATCGAGCGACGACAGCTCTCGATCCACTGCTTGAAGACGGAGGAGGACGACGATGACACGGCTGCCATTGGATTCAACATGGCATGGGACGATGAGTCGGTGACCGTGGCAGTTGCCTCTCCCGTCTTCTCCGGACAACGAAGGACTCGGTGGCGTGGATTGGATCCCAACAAAATCCAATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0443600.1 | 9 | 18316426 | G | A |
| Osa09LNT0443600.1 | 9 | 18318395 | C | A |
| Osa09LNT0443600.1 | 9 | 18318697 | A | G |
| Osa09LNT0443600.1 | 9 | 18320076 | G | A |
| Osa09LNT0443600.1 | 9 | 18320131 | C | T |
| Osa09LNT0443600.1 | 9 | 18320728 | T | C |
| Osa09LNT0443600.1 | 9 | 18321921 | C | T |
| Osa09LNT0443600.1 | 9 | 18322080 | A | G |
| Osa09LNT0443600.1 | 9 | 18322366 | G | T |
| Osa09LNT0443600.1 | 9 | 18318257 | A | G |
| Osa09LNT0443600.1 | 9 | 18318402 | A | G |
| Osa09LNT0443600.1 | 9 | 18321343 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0443600.1 | osa-miR5793 | Translation | 5.0 | 17.048 | 1 | 21 |
| Osa09LNT0443600.1 | osa-miR171c-5p | Translation | 4.5 | 17.036 | 1 | 21 |
| Osa09LNT0443600.1 | osa-miR1425-5p | Cleavage | 4.5 | 17.036 | 1 | 21 |
| Osa09LNT0443600.1 | osa-miR1438 | Cleavage | 2.5 | 12.334 | 1 | 22 |
| Osa09LNT0443600.1 | osa-miR1873 | Translation | 5.0 | 20.242 | 1 | 24 |
| Osa09LNT0443600.1 | osa-miR2100-5p | Translation | 5.0 | 10.913 | 1 | 22 |
| Osa09LNT0443600.1 | osa-miR2927 | Translation | 4.0 | 18.797 | 1 | 23 |
| Osa09LNT0443600.1 | osa-miR5083 | Translation | 4.5 | 14.009 | 1 | 20 |
| Osa09LNT0443600.1 | osa-miR5492 | Cleavage | 4.5 | 11.407 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0443600.1 | 9 | mrl9a | Resistance or Tolerance | Drought tolerance | RM201 | RM410 |
| Osa09LNT0443600.1 | 9 | qSB-9 | Resistance or Tolerance | Sheath blight resistance | C472 | R2638 |
| Osa09LNT0443600.1 | 9 | nan | Morphological trait | Panicle/flower | RM257 | RM566 |
| Osa09LNT0443600.1 | 9 | rdw9 | Resistance or Tolerance | Drought tolerance | R79 | R2638 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)