© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0444500.1
GGGTTCTAAACACTCTAGCATTTTGCCATGAGGATATCCAAGTGCTGTTCGTTCATTCAGCGTCTGTTGCAAAGCAGTTCCTTCCCGACCAATTTCCAACCCCTTGTTCACCTCACAGCAAATCTGCAACCCAAGACCAAGAGGCTCTCTTTTCGTCTTCCGTTCCACACTTTCACTGGTTACTCAAACCAGGCCTCTCCGACCATATACTTCTCTCAGGAGCTCGTATCTCGCGTTCGACATAGAGCCACCTTGCCGTGTAGTCGAACGAGAGGCCCCGTTGCAGGGTGAGGGTGGAGAGCTCCTGTCGTACAGGGACGCCAGGGGGTTGCCCAGGTCGTCCAGGTCGTCGTCGCTGGTGTACCCTCTCCTCTGCACCATGGAGGCCCTCAGGTCCGGCTCCGCGTTCCCGCCTGCGTCTGCTACTTTCTCCGCGACATCCTCCGGTGAAGGGGGGCAGTAGACAACAGGAGCCGCGACGCAGGGGAATGTGGTGATCACATCTTTCTCCGTGAAGCGCTCCAGCAAGCTCTCGGCATTCAGCTCCTCTAAAACCATTCCAGGAACAGGTTCAGGACAGAACTCGTCAGGAGTGAAGTTGCAGAGTATCCTTGTTACCAGTGGAATGCCAATAGAAGGGCAGACCTCCTTCCTGATGGACTTTTCAAGAAGCATGTCCTTTGGGAGCATCAGAAGATCACTTAACTCGTTGAGCAGCTTGAAAGAATAAAAATCAGCAGCACCACTTCTGTCATCACTCTCATCTCCTGCTTGACCATGCTTCTCAGGGGCAGCAGCAACCATGCCAAACTTATCTTGCAACCATCGGGACCAATTTCCGATCGAGTTCTTCAGCTGTGCACCTGATCCAAAGCTGAAGTCACCAGCTGGAATCGGTAGAACTCTTGAGTCGACAATCGGGTCAGATATAGGATCAGATGGTACTTCATTTGCAGATTCACGCAGGACTGCATTAAACATAGCAACGTCTAAACGAGCTACACAGTGCTCCATCACCAGTTTTGCCAACACTGGTAAGCATCCACACTCATGTCCACCAGCACGAAGAGGACATATTCTGCTGAAGGCATCTTGGAAAGCAGTTTTCCAAAGATGAATGGAGAAGTTCCCTTGTTGCTGATCACCCAAAGCAGGTCCCAACAAACTCCCAGCCTTTGGACTTGATATATCTTTCACCAGTGTTTGCATGTGGGGTGTCAATGCCTGCCACCACACTGACTCAACAATCCGAGAAAAGATCCATGATTCAATCTTCTCCAGTGCAGCCACGAGTGTACCAGTTTCCCGCCAATCATCAGGTAATGGCCAGATAGCAGGTCTAGCATGCTTGCCACTGTAGTTGTTTTTCCGCCGCGTTGGTGAAGAGTTCTTACCGAGCATCTTTGCATTAACATTTGTGCTGAAAGCCTTCATAGCAAGACTTGGTTGGCGTGTAATGCCAAATGTTTGTGCAATGATCTCTCTTAGGACAACGGTGTTTGATAGCCAGAATGTCAACCTTGAAACATCATTTCCACAAGACTTTGCAACAAGGACAAGCCCAGAAACGAAGTTCTTTGTGACAGAAGCTTTCTTATCAGAGGACCAAAACTTTGATGCATGAACATATAGCCTGGACAGACGCCGAGCTGGTGTGTGCAATTTATGCGATGAACAACCGTGCTCTGGCACTACTGAATAAAGAGAAATCTCAAGGGCAGCAACTTCTCGAAGTTCCTGCTCCAACCTTTCACATTTAGATTCTAATTCCTCACTCTTTTCATATGCAGCTGATTTACCATCATAAGCTATGCTTTCTTCAGTATCAGCTATTTCCTCGTCAGTAGCAGTACTCTGATCACAATTTGGGGCTTCATCCAATATATCAATCTCCTTTGCCTCTTCACTAGATTTAACATCAGCTGCTATACCCGCAATGGTCCTATCATCAGTGCCACTCTCAATGCTCCTTTCATCAGTGGTGTTGTCCTCAACGGTCGTATCATCAGCAGCTTTTCCTTCAGTGGCCTTATCATAAGAGGCCGTGCCCTCAGTGGCCTTATCATCAGCTACATCCTCAATGGATTTATCATCCGTCACTATATTCTCAATGGGTTTATCATCCATCTCCTCAGACACCTCAGATGAAGGACAAGAAGGAACTGTCACTGTATCTGGCTTTGTTATCTCAATGGTTTTAGCACCATCAGATGTTTTGTTTGGCTTTGGAGATTTGCTCTGCAAATTGTTTGACGATATATATTGCAGCTTAGTCTGCACTTGGCGATTGGAATTAATTCTGCCTGAGCGTGGGCTGTTTTCCTTTGAATCTTTCTTCACTAGCTTCTTTGGAACCCTTGAGACTCTTTTGGCTCTGGTATCTTCATTGCTGTTAGCCTCACCCTGAGATGAAACAGAGTCTCTAGCTGGTTCATAGTCCGATTCAACTTCTTTTCCTTGTTTACCATCCCGTTCCACATCAGTCGAACGCTCTTCTCTCCCTTCCATATTCTCTACAGTACCCATCTCAAAGGTTGTTTAGTGCACTAGAAACTTGATACACTGCACCCAGAGTAAAACGCTAAGAAGCCCATGTTCATAACTTCATAACATTGAACAAGTGATAGGACATCAAATGAATAACTGATCTCCAGCTTGTCTCAACAGCTGTACAGCTAAGCAGAATCTCCACCTTAAAGAAGCATCTCAAGCAAGATTTTTCACCTTAAACCGACGTAATAACACGAGAATTCAGTACAATTATGCTTCCTTGTCCAGTCGATCTCAGGAAGAAGGTGGTTGTTAAGCACATGGCAGTGGGGCACGCTGGTCTTGGACCATCATGCGACTTGGATTGCATTGGAGAATTTGAGGTCCCAACGGCGCGAAAGAGCCCCAGACATAAAGCTGTACAATAACTATAATACAGGCAGATCTGACAAGCCGCAGATTTGGAAAAAGCTAACCACAATCCATGATGAATATGCATACTGGCCACCAGTGACAGTGAGCTATCCAGTACTGGATTCCATACCAAATAACCCCAAGTCCTCCTAGTCATTGCCCACATTCACCAATCACCACACGAAGCAGCTAAATACTAGGCAAGTGCAGTGATACTACTTTGGATGGATGGAGCAAATGGCTAGAGCAATTCACCATGTAAAAGTTCAAGATTAACACATACTAGTGTATATATATTGACAAATTTCGGATGCCACCGATGGTCCCCAAATTCACATTCCGATGCTCCGTACGCGCAGAATTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0444500.1 | 9 | 18784963 | C | T |
| Osa09LNT0444500.1 | 9 | 18785960 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0444500.1 | osa-miR5544 | Cleavage | 4.5 | 9.201 | 1 | 22 |
| Osa09LNT0444500.1 | osa-miR6247 | Translation | 5.0 | 9.611 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR6252 | Translation | 4.5 | 19.362 | 1 | 23 |
| Osa09LNT0444500.1 | osa-miR7694-5p | Cleavage | 5.0 | 18.005 | 1 | 24 |
| Osa09LNT0444500.1 | osa-miR397a | Translation | 5.0 | 12.574 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439a | Cleavage | 4.0 | 20.621 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439a | Cleavage | 5.0 | 17.172 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439b | Cleavage | 4.0 | 20.621 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439b | Cleavage | 5.0 | 17.172 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439c | Cleavage | 4.0 | 20.621 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439c | Cleavage | 5.0 | 17.172 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439d | Cleavage | 4.0 | 20.621 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439d | Cleavage | 5.0 | 17.172 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439e | Cleavage | 4.0 | 20.621 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439e | Cleavage | 5.0 | 17.172 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439f | Cleavage | 4.0 | 20.621 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439f | Cleavage | 5.0 | 17.172 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439g | Cleavage | 4.0 | 20.621 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439g | Cleavage | 5.0 | 17.172 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439h | Cleavage | 4.0 | 20.621 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439h | Cleavage | 5.0 | 17.172 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439i | Cleavage | 4.0 | 20.621 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR439i | Cleavage | 5.0 | 17.172 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR444b.2 | Cleavage | 4.0 | 15.218 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR444c.2 | Cleavage | 4.0 | 15.218 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR444f | Cleavage | 4.0 | 15.218 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR1846a-5p | Translation | 4.0 | 19.251 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR1846b-5p | Translation | 4.0 | 19.251 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR1846c-5p | Translation | 4.0 | 19.251 | 1 | 21 |
| Osa09LNT0444500.1 | osa-miR2100-5p | Cleavage | 4.0 | 16.332 | 1 | 22 |
| Osa09LNT0444500.1 | osa-miR5157a-3p | Cleavage | 4.0 | 11.495 | 1 | 24 |
| Osa09LNT0444500.1 | osa-miR5157b-3p | Cleavage | 4.0 | 11.495 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0444500.1 | 9 | cisc(t) | Resistance or Tolerance | Cold tolerance | nan | nan |
| Osa09LNT0444500.1 | 9 | qGL9 | Morphological trait | Seed | RM257 | RM242 |
| Osa09LNT0444500.1 | 9 | qCCAI-9 | Physiological trait | Source activity | RM257 | RM201 |
| Osa09LNT0444500.1 | 9 | mrl9a | Resistance or Tolerance | Drought tolerance | RM201 | RM410 |
| Osa09LNT0444500.1 | 9 | nan | Resistance or Tolerance | Other soil stress tolerance | R2638 | C1263 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)