>Osa09LNT0445300.1

CCTCAATTTCCCCATAGACCGGGCTAAGCGAAGCCCAATTGCTCGAGCTTTACAACTTTTGAAGAAAAGTAATGCATAAACACCAGGGTATTGCTGATTAGTAGAAAGGCTCACTTCAAATATTTCATCAATTCTTTCAATGAATGTCTGGAACTGATTAGCCAGTGACAGGTCATCTAACAAAATGGGATACATCAAAACTTCAAACATTATGCTAACTTCTGCATCATGGCATGAAGGTTTGTACTCCTTTAATTGTGCTTTTGCATTCATCTGCCTAAGATGTTCTGTAACCCTCTCTTCATCGAGAAGCCGTAACACTTTCAGGAGGGCGTCAACGCCAGACCGATATTCAGAATCAAAATCCTTCTGTGCCTGGTGGTGTTCGCAAACACATTGTGCGCAAACATTCAGCTCTTCAGAAATCCGTTTCCATATTGTCCTAGGAGGTGAGTTTTCCTCTTGGTCATCAAAGTAACCAAGGAAGGTCTCCAGAAATGGTCCCATAATATCAGCATATCCACACCAAATATGCTCTTCTTTTGGCAAACTTCCCAGAAAATTAAAACAATGTGAAAACC

Explanation	CPC Score
noncoding	-1.36325

Transcript ID	Chromosome	Locus	Ref	Alt
Osa09LNT0445300.1	9	19211121	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa09LNT0445300.1	osa-miR1430	Cleavage	5.0	12.791	1	21
Osa09LNT0445300.1	osa-miR2098-3p	Cleavage	5.0	12.191	1	20
Osa09LNT0445300.1	osa-miR395x	Cleavage	4.0	13.229	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa09LNT0445300.1	9	mrl9a	Resistance or Tolerance	Drought tolerance	RM201	RM410
Osa09LNT0445300.1	9	Symptoms	Resistance or Tolerance	Other disease resistance	RZ228	RG667
Osa09LNT0445300.1	9	Ta1	Morphological trait	Culm/leaf	RZ228	RG667
Osa09LNT0445300.1	9	qCCAI-9	Physiological trait	Source activity	RM257	RM201
Osa09LNT0445300.1	9	ta9	Morphological trait	Culm/leaf	RZ228	RZ12
Osa09LNT0445300.1	9	Ta	Morphological trait	Culm/leaf	RZ228	RG667
Osa09LNT0445300.1	9	Ta	Morphological trait	Culm/leaf	RZ228	RG667
Osa09LNT0445300.1	9	nan	Resistance or Tolerance	Other soil stress tolerance	R2638	C1263
Osa09LNT0445300.1	9	cisc(t)	Resistance or Tolerance	Cold tolerance	nan	nan
Osa09LNT0445300.1	9	qGL9	Morphological trait	Seed	RM257	RM242

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus