© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0445500.1
AAGAGAATTTCACACATCACATCTTCTATGGAAGCAGTATTTTGGAGTAATTTCCAGCTGATGAACCATAACTTGGTAGTACATGAAGCACACACTCTTTCCACATGCCTAATCTAGTGTCCTTTTTTTTTCAGCACACTAATTCTGTGCTTCTCTCCTTTTGTTATCAACAACAATTAAGTAACACATAAATGATACTGTTCCTCACAACATCATGAACTAGTATACAACAAAAGGACTTACATATGTACCCAAAGCTTGGCCAAGCAACTCACTTCAGTTGAACTTATTGATGCTGATGCTGATGCTGATGATATAAGAACAGTACTAGCAGTAACATGAGTAGGCAAGATGGCTCTTCTTGGACACGTATGTGGAGACGAACTCTGAAGCCAGAGCTGAACTGCTGGACACTGGAGCAGGAACTATGATGTTTGTCAGGCCTGCAGCGATCCTCTTACCGGCGACATGTCCGTAGAACAGGCCGGGGATGGCAGGGACGAACACGTCGCTCTCCGAGCAGATTTTGAGGTCCAGTGCTCTTGCAAGGTATGAATCCCCGGATTTCAGGAACTCGCCTTTGTTAGCGGCCGGCATTATATCATCCTTGGTATAAGTGTTTGGAAATGCCTCCTTCAGAGTATCCAGGCTTTTGTGCCACCATGTCTCCGTCAAGTAGATGGTTGTATCAGCAGAGAAGCCAACCTTCTTCAGGAAGTGCACAACTTCCTGAGGGTAATAACAGCCTCTTCTTCTTGCACCTCCATTCGTCTTACAGATCTTCTTTTCTAGCAATTCGGTCTGTAAATCAATAGCTATAACCATCCCATCGGATTTCTCGCTTATTTCTTTAAGCTTGTCCAACATATGCTTGGCTACTGCTGAAAATTCAGGTTTCAACTGAAGGCCACTGAACATTGCAAGGCAGGCAGTCGAATCCAAGTCCTTGTTACCCGACTCCTTCTGTTTCAAACTTACTGAAGAGAAAATAGTCGCAAGTCGTAAGTAGTTATTTCTTTGGAAGATCGGCTCAATGGTTCCCGTGATGAACTCTTCAGTCACCCGGTTTGGTACTCTAACTACTGCTGGCTTCTTAGAAGACACTGCATTAGGAAGTGAATGTACTACTTTGACAACTCCATCCAAGCTCGTCATGAATTTATCCACATCATACATGTCTTCGAATTTCCGCCTCTTTCCTAACTCATTTCCTCTAATTTCTGGAAGCACAAGTGTTGCACCTAAATATCTTGCGATAACCACAGCATCAGTAATCTGTGAGATGTGGTATTCAGGGCCCATAGTCAATGAGAATGTAACAAAACCCTTAGACTCCTGAACATTTGATCTTGGTTTAGACCAGCAGGGTCTAATCTCCTCAGCAGTCTCCTTTGGGAGATCCACTCCAGCCTTGTTGACCTTAGTCATTTCAGTAGTATCTGCAATTTTAATTTCGTTTGATTCTATGCCTGTTGCCTCCAAGCCCAACTGTTGGTTTTCAAATTGGGGTCAGTCATATAATGCCCAGTTTAAATTTAGTCAGTTCAAAAGAATCGTTCATCACTGGAAGCTTGGGACAGTGTCAATTGACTCATACCAGTTGAGCATTGGACAAAATGAACACTGTAGTAAAAGATTCCAAAAATCTGGCACATCAATGATTTGCATACAAGAATCAGAACAAGTAAGCTCATGACACAATCGCACATGATTTGCTTCCTGGAGAGACTGAGCTCTCTCTGTCATATCAAGTTCATAATGATAACTATCACTATCCAAAGAGATTAAAAACGATGTACTGTATTTCCTCCTTTGGTTTCATCTTTGCAATTGATGCTCTCTTTACTGATGATGTGTCCCCCACCAACTAGCCTTTCTTTAGGAAGGCTGAAGGCATATAATTTAGTGCTATTCTTCACGGTTATCGAGCTTCGGATTCTTTTTTGACTGCAGACAACGTGCTGATCGACTAGTAGGTAATAATTAATGTAAACCCCAGTTAACCCCTAATGAAAGTCAAGGTCACAAGACGTTCAAGATCCCCTTCACCACTAGATCCACAGATCGCTTGCAATTATCCAAGAATTAAAACAAAAACAAAGAAACCCAAATCATAATCACACTCCTGCATTCCACCGGCGAGCCAAATCAACACGAACAGCTACTAAATCCCTTCATCTGAACTACTCTCCGAACCAAAGAAACCCGGACAAAGAGAGTGAGCTAAATCAACAGCGAAAGAAAGAATTCCTCACGCAGAGACCAAGAACCTGGAAGAGCAATTAGCTAAAGACGAGAGAGATCTCCACGGGAAAGGGAAGGAATCAAGAAGCACGAACCTCCTCCTGGCCGGCGCCGACGGGGGTGAAGTGGTCGTGCTTGATCATGTTGCCGAGCATGACGAACATGGACAGGGTCAGGAACCCGGCCACCACCTGGCGCGGGTCGACCGCCATTGCAGAGGATCGAGCAAGCAGTGCACCACCGACAGAGGAGGAGAGCAGCCGAGGAGAGTGAGGAGGAGAGAGATGAGGGGGACAGAGACCCAGAGGACAAGCACGAGGTCAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0445500.1 | 9 | 19294576 | G | C |
| Osa09LNT0445500.1 | 9 | 19293975 | C | T |
| Osa09LNT0445500.1 | 9 | 19294217 | G | A |
| Osa09LNT0445500.1 | 9 | 19294599 | A | G |
| Osa09LNT0445500.1 | 9 | 19294243 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0445500.1 | osa-miR5793 | Cleavage | 4.0 | 13.235 | 1 | 21 |
| Osa09LNT0445500.1 | osa-miR2873c | Cleavage | 4.0 | 8.743 | 1 | 21 |
| Osa09LNT0445500.1 | osa-miR7694-3p | Translation | 4.0 | 23.484 | 1 | 22 |
| Osa09LNT0445500.1 | osa-miR394 | Cleavage | 5.0 | 12.196 | 1 | 20 |
| Osa09LNT0445500.1 | osa-miR171e-5p | Translation | 4.5 | 12.073 | 1 | 21 |
| Osa09LNT0445500.1 | osa-miR1874-3p | Cleavage | 4.5 | 14.103 | 1 | 24 |
| Osa09LNT0445500.1 | osa-miR2105 | Translation | 5.0 | 7.904 | 1 | 20 |
| Osa09LNT0445500.1 | osa-miR5340 | Cleavage | 5.0 | 7.904 | 1 | 23 |
| Osa09LNT0445500.1 | osa-miR5519 | Cleavage | 4.5 | 22.048 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0445500.1 | 9 | cisc(t) | Resistance or Tolerance | Cold tolerance | nan | nan |
| Osa09LNT0445500.1 | 9 | qGL9 | Morphological trait | Seed | RM257 | RM242 |
| Osa09LNT0445500.1 | 9 | mrl9a | Resistance or Tolerance | Drought tolerance | RM201 | RM410 |
| Osa09LNT0445500.1 | 9 | Symptoms | Resistance or Tolerance | Other disease resistance | RZ228 | RG667 |
| Osa09LNT0445500.1 | 9 | qCCAI-9 | Physiological trait | Source activity | RM257 | RM201 |
| Osa09LNT0445500.1 | 9 | nan | Resistance or Tolerance | Other soil stress tolerance | R2638 | C1263 |
| Osa09LNT0445500.1 | 9 | Ta1 | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Osa09LNT0445500.1 | 9 | ta9 | Morphological trait | Culm/leaf | RZ228 | RZ12 |
| Osa09LNT0445500.1 | 9 | Ta | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Osa09LNT0445500.1 | 9 | Ta | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)