© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0041700.1
GATTTATGCATATTTCCAGTTAAAATAATCCAGTTATGTTGTTTCATGCGAAGGTGTAATGGTGTATCAGCGTTTTCTTTTTTTCAAAAGATATTTCTAATGAATACTGCTCAAGATTACCAGGTTTTTCTAACAAAGAGCGAAACAATTGGCACGAATAAATACTCCAATCTCGGGAGAGAGAGGAGATAAAGGGGTCATTTGGGACAATACATTGTGGCCAACGCTCGGTGCACTGTCATCTGAATGGAAGGGCCATAACCCATCACGTCCTGTTTCTGGTTTTTGCCGTACGTTCCTTCTCCTCTAGCGATAGCCTCCCCGTCCACGTCTATTATGCCACCTCGTTTTGGATTCTCCACAAGCTGGCCTGGTGATAACCGAAGACATCTCACCTTTAGATACGTAACGTATGGTGATTTTACATGACTCCCATCGCCCATCTTCATCAGTAGGGCTAAAAGATCAGCCTTTGGACAGTCCCTGACTATGACTGCATCCATGTAGCCATCTGAGAACTTGGCCCCAGGAGCTGCCATGATACTCTCAGCAGCCCATTGCACGTTGTTGATCCAAATAGACACAAATGGACCATCAAGGGATCTCCATTCTGAACCTTGAAACTCAACGGAAGGACCTTGATAAGAACACAAAGACTTCCCAATCTGTTCTTGGCATTCTACAGTGCAATTCTCAACCTGCTTGACGACATCTCCATATGCCTCATAGCCGGGGGCAGGAACATACTGAATACTTCCGTAGTATTTTCTCAAGTTCATTATGCGAACCAAAGCATAGAAATCAAAGCGTGCACTTCCCATCCACCTGTACTTCTCAGACTCAATATCTATATCAGCCACCAAACCCCAAGTCATATTCAAGACACTGAAAAATTTCTTCCTTCCCTGCACAATGGTGCATACATCCAAGGACTGACTGTAACCTCTGATAATGGCAAATACGGCATTTGGAACCGAGTATGTCTTACTGGCAGAATGCAACAGCGATTTAGCCATGCCATTTCCTGTACCTGCTGGAACCACCCCAATCGGTATCTTCATCGCTTCCTCCCAATCCATTCGTTGTAGAATTCCATTTACTACCTACACTAGAAATGGCAGCTTGAGAATCACTGAAAACAACGAATCACCCATTAAGAGACCCTTCAGAGGCAACTAGAAAGGAAAGTTACACCTAGACGTTTTTAAGTACTACCTCTGTTTTTTAATATATATGACGCTGTTGACTATTCATCTTATTTTTTTAAAAAAAATTAAGTGTAAAAACTTTTAAGTCAATAACATTTGACGATAAATTAAGTTACAATAAAATAAATGATAATTACATATTTTTTTTAAATAAGACAAACGATCAAACGTGTCTTAAAAAGTCAATTGCGTTATATATTAGAAAACGGAGGGAGTACAATGTAAGCACTGAAAACGACTCGAGCCAATTATGTGCTGGTTATGTACCAATCTGGAAGATATCTGATAAGTTTCATAATCAACTTTAGTACTGTGCAATTAAACTGTTTGGATGACATCGACCAATTATCAAGCCAAAAGTCGAAGGCTTTAGCTAAGGCAAATCATGTAAGGTGCAAATGATGTTGACCTTGTACAGTACAAATTAATCATTAATATTTTGTACTTGCAAATCTTTCTTCTTATTACTTTTTGCGAGCCTTTCTTGCAAATCTGGACTTTCCCCGATAGATATAGAAGTATATCCTTTTCTCTTAACGCAATCATACGCAAGCCTTTTACGCATTCCCCGAAAAGGATATACGAGTATATCAGTAAAGAAGTCAACCTGCACAAACCAATACGAGTATATCCAAACCCAGCCATGGCAGCAATGCAAACACGTTACAAATTCAACGGATAATTACTGAGTATATCGTCACTAACCTCCACGAGGACACCATCGCCGCTGACACAGACAATGCCATCGTAGCGCGCAAGGTCAAGAGAAGACGCCACCTGCCGGGCGTGCCCCTGATACCGGGTCTCTTGCATTGTGACGTTGACACCGGCGGCCTCGAACAGGGGCTTGATCTCTGCCTCGTAAATCTTCTTTCCGCATTTTTTGCCGCCGAAGGGGTTGACCAGGATGAACAATCTCTTAGGCCGGCCGAGAGAGTCCAGGGAGCCCCTCATCCTGTCGCACCAGGCCGCGGCGGCGTCCTCGCCGGCGGCCATCTCGAACACGTAATCCCTCCTGCGCCTCCTCCGTCCTCCTCCTCCCTTCCCCGCACCCGCGGCGCAGGACACCGACCTGGCCGCCGCGTCCGCCGGCAGCACGAAGGCCTTCACGACCACCTCCTTACCCCTGGCCTCGACCCCGAGCACGTCCGCGTCCAGCGACAGCACGCGCTCCGCCGCGGCGCCACCAGCGCACCGCCACCGGAGCTCCCCTCCATCTCCGCCGCCGCCATTAGCTGCACCCGGCGGGTCGGTGCAGAAGAGCGTCGCTTCTGCCGGCGCGCCGTTCACGCGGACCTTGGCCGTGGCGCGGTGGTCTCCCATGGCGGAGGCGGAGGCGAAGGTTTTTGGGCGCTGGAGTGCCAGAGTGGGGATGGGGCGACCGGGCGAGTGGTGCGCGCGACGATGAGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0041700.1 | 1 | 33150871 | A | T |
| Osa01LNT0041700.1 | 1 | 33151510 | T | C |
| Osa01LNT0041700.1 | 1 | 33146105 | G | A |
| Osa01LNT0041700.1 | 1 | 33146599 | A | T |
| Osa01LNT0041700.1 | 1 | 33146987 | A | G |
| Osa01LNT0041700.1 | 1 | 33146996 | C | A |
| Osa01LNT0041700.1 | 1 | 33147002 | G | A |
| Osa01LNT0041700.1 | 1 | 33148998 | T | C |
| Osa01LNT0041700.1 | 1 | 33149961 | A | G |
| Osa01LNT0041700.1 | 1 | 33149962 | A | G |
| Osa01LNT0041700.1 | 1 | 33150573 | G | A |
| Osa01LNT0041700.1 | 1 | 33150826 | A | G |
| Osa01LNT0041700.1 | 1 | 33150845 | A | G |
| Osa01LNT0041700.1 | 1 | 33150869 | A | T |
| Osa01LNT0041700.1 | 1 | 33150954 | T | A |
| Osa01LNT0041700.1 | 1 | 33150972 | G | A |
| Osa01LNT0041700.1 | 1 | 33152126 | T | G |
| Osa01LNT0041700.1 | 1 | 33151552 | T | C |
| Osa01LNT0041700.1 | 1 | 33146949 | T | C |
| Osa01LNT0041700.1 | 1 | 33148256 | T | G |
| Osa01LNT0041700.1 | 1 | 33148516 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0041700.1 | osa-miR5540 | Translation | 5.0 | 15.275 | 1 | 21 |
| Osa01LNT0041700.1 | osa-miR6248 | Cleavage | 4.0 | 8.099 | 1 | 21 |
| Osa01LNT0041700.1 | osa-miR5512b | Cleavage | 4.5 | 18.853 | 1 | 21 |
| Osa01LNT0041700.1 | osa-miR390-5p | Cleavage | 4.5 | 21.402 | 1 | 21 |
| Osa01LNT0041700.1 | osa-miR1858a | Cleavage | 4.0 | 12.18 | 1 | 21 |
| Osa01LNT0041700.1 | osa-miR1858b | Cleavage | 4.0 | 12.18 | 1 | 21 |
| Osa01LNT0041700.1 | osa-miR1320-5p | Cleavage | 5.0 | 13.788 | 1 | 21 |
| Osa01LNT0041700.1 | osa-miR2872 | Cleavage | 5.0 | 9.248 | 1 | 21 |
| Osa01LNT0041700.1 | osa-miR812k | Translation | 5.0 | 11.979 | 1 | 24 |
| Osa01LNT0041700.1 | osa-miR812l | Translation | 5.0 | 11.979 | 1 | 24 |
| Osa01LNT0041700.1 | osa-miR812m | Translation | 5.0 | 11.979 | 1 | 24 |
| Osa01LNT0041700.1 | osa-miR5512a | Cleavage | 4.5 | 18.853 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0041700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0041700.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0041700.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0041700.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0041700.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0041700.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0041700.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)