© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0446600.1
GGCACTTTGCTAATTCGGATTTATTTGTCAGGGGATTAAATTTCTAGGGATTTGGTGGATGAGGTTCATTTTCTGTAGGAATTAATGGGGAGGAAATTCTTTCGTTTTCCGACTTGTACACGAAAATGATAACAGTTAACAGATAAGTAGACTCTTGACTTGAGAAAACACCTAAGCACAATTAATTGACCTTTGCAGTGTGACGGTGCAGTTCTTGGCAGAGCTTAATTAATCAGCATAGCTAATTATTCAATCTTGGCATTGACAACGTGACACCCTGCCTGGTGAAGCTGAAAACGACGTTGCCGAATGATTTTGAATTTTCTCTCGTCATGAGCAGCGGGCAGGCAGTGGAATGTAGCTTGATATATATATTGTCCTCTGAAACTGAAGCATATTCATCTCCAAGCCCAGCTGAAACTTGGGAAAACTTTGAAAATATACAAAGCATGATTGGATGTGACTGCATGTGGGTATATTGGGTGTAACACAGTGTAAGGGAGAGTGTCACTGTCCAAGTAGATGTCACACTTTACACGAGCAAAACTCACACTGCTCAGCAACAGAAACGTGAGAGTAAAGTCCATCAGATGACACTGTGTTCTGAAGCTGCAGGCATTCAGATCCTTGTAGCAGTTCAGAGCTTGGGCAGTCACATGGACAACTGGGGGCGCCACGTGTCGGCAGGAGGGAAGTGCATAGTTTTCATTTTCACCAAACTAGTAATGCTTGCAGGAAAAATCATAGTGGTACATGGGATCACTATATGTACATCATCATCTGTCATCAGAAGGGCAGCAACTTCATGTTGGGGAGTTGGGGCCAATTGCAATGTACAAAACTCACAGTGCATCATCAGCAAACAGGGGAAAAAGAAAGACCAAAAGAGCTTTGCAAACTGCAACCAGAAGGAAATTGGGGTCTGGTCATTCGTCACGCTAAGACGAGACCCGGAAAACGAGGAGGGCACAATGCAGCTCCAGAACACCAATACTGTTCTCGTCACAGATTGTGATCATCGGCGACACAAACTTGGAGCTTGCTGTGCCGGTTGACTCTGTCATGGAGGCAACTGAGCACACAAAGCTTTGCTCTGCTGAACTGAAGGGGTATTGGTAGCTAATGGATTATCTACTTGGGTCTTCTAACAAAACAAGAATCTCTTCGTCGTCAATAGTTCCACTGTCAATAGCATACTGTAATGCTGTTCTACCATCTCGGTCCGTGGCTTGTGAATCAGCGCCCCTGGATAGCAACAACTTTGCAAACATATGTCGTCCTTTCAAGATGCTGTGATGAAGAGGCGTTCGACCTCTAGAGTCTGCAGAATTTACGTTGGCACCATATTGCAAGAGAAGTTCGACCATACCCACATCTGCAACACGGCATGCTAGATGAAGCAATGACAATCCCTCGACACAATCATCCAATTCATCTATACGTGCACTTGTGCTGGCAAGAGAAAGAGAGTCCCTGGGAGAAATCCTTTCAAGTGAACTACGATCAAAACATCTGGAACTTCCATCTGATGGTGAAGTTGGCTGCTCTTGTAAAAGTAGAGCTTTTCCAAGGGTTAGGGCCGAATTAAATGATGTCTGCCCATAAGTTAAATTTACATCGGCATTTGACCCCACAATCAGACTGTAAACCCCCTTCTTGTTGTTTGAACTAACATTTTCCCACATCTGTTGAGCTACCAGGCTATCATCCATATTAAGCTTTCGCACATAATCTCGCTCGGCATACTTTGCATGAATAAATTTCTCCTTCACAGCAATATGATCCGAGTGTTTAGGCTTGCTGAAAATTAAGTTATGTGATGTGTTTTCTAGTCCATCAGCCCTTGAATTATCACCATGATCAACACTGCTTGATGAAGGTAACATATCTTCCCAGATAGTGTTGGCAAATGTGTTTCCTAATGACTGGAAGAGATTGATTACAGATGGCTCCCAGACCCTGACATCAAGTGTCAGTGATCTTACCTTAGATATATGCACACCGAGATTTCTGTGTACCCCAGAGCATTCGATGCATAGAAGAATTCCAAGGTTTAGGGATGCCCAGTCAGGCTCTGCTGCACCACAATCAGCACAAATATTATTGCCGACCACTTTCCTAAGCAAGTCAATTGGCTTGTCAGGTTTCATGCTGGTTCGGTGATGCTGGATGGCTCTGCCAGAGTGGTCAAAATACCCACTTCCAGAGTTCCTTTCCAGCATGCAGTCTTCACTAATGGAATGGTCAAGTTCTGTCGAGCTACTAAAGGAACTACTTTCGCTGGCAGTTCGATTATGGCCGCTACCCTTTGGGCTCGACAGAAGACGCCGTTCGGGCGATTGGGAGCTCAGCAAAGAAGCGATGACACCAGTTATTTTTTCAATCCAATCCATCTGATCCATCGCACTCTCTGCAAAGTGTAGTTTTTTGTGGGAGAAATTATTCTGAAGCAGAACCGCAGATCCGATTGGTCAGCATCAGCTTTAATGGTTGATGTTAGCAAGTTCACGGTATGCCTTGCTACAGATTTCTCATCGTGTACTCCACCATGATAATGAGAAGAGAACCATCTGCTAAGCAACCCAGAACCATGCTCTGACGGAGCGCTACTTCTTTGGTTAGTATAACCACTAGATGGTCTACTATTCTGCTTGCGATAATAATATAACATTCCTCGGCTATCAAGAACAAAGAACCTTCTTTTCCAGTCACCTCTCAAGTTTGAAGATCGCTTTGAGAGATAGCCTTGTCGAATGGTCTGTACCTTGCCCTTTGAAGCTGATTGCATCACCGCCTCAATCATTTTGTGTGAACTTCTACCAATTGCTTGTATTCCATCACCATTAGGGGAATCGTTTATGCCATTTGGTGACCAACGACTTTCCCGATCAATTTGCCTTTTAAACTCTTGCATCCTCTCTACAAGAGCAGCTTGCTCATAGTTAGACCGTTCCCTTGATTGCTGTGCATAAGCAAGAACTTGATTGATATATGGCTCCATCTGATGGAGTAGCTCATATCCTTGTTTGAAATAGCGCAGATGTGCATCCATTGTCCCACTGACAGCCTCTAAAAATTCAAATCTTTTCTTGGCCTCGATATTTGAAAGTGCAGTCACCAGGTTGAAACGAGCTTGCTCAAATGAGGATCTGGCACTATGGAGCTCATCCTCCACCGCAGTTGCTACATCTGTCCGTGTGCCTTTCTTCAAGGATAAATACCTCTCACGAGCCTGGTCATAGAGAAGGCTAGCCTTGTCAAAACGCTTCCTGGCATCCTTCACATCATGCAAATCAATGTCCACAAATTGCAGCAACTTGTCATTTAGCATATTCTCAACCTGTGAGCGCAATACTTCCTTGTAAGTTCCAATTTCTCTCAGGGCAATTGTAAATTTGGTCATGACGGGTCCTCCAAAAGCAACACTGATTGGATCATTATGCCCCCCTCCAAATGCTTCCAGTGAACTTGCAAATGCAATATCTCCATCATATGCTTCCCCTAGTCCTTCAGTGTATTTGCGGCAACCTTTATGAAACCTCAAACATCTCTCTCTCAGCAATTCAGAACCTTCTTCAAGGGATTGTATCTGCTTCCTGAACATGGGCGAGTCATCCAGCCTGGTGAAAAACATCTCCGCCGCCGCCCGCCGCCGCGACCACCACACTGCTTTGCCTCCCTACCACCACAACCTCATCAACGCCCTCTCCTCGCACCACCACCACCCACCTCGTCGGCGACGCACTCCTCTCTCTCTCCACCACCACCACCACCACCTCCTCCGCCCTCCTCCTCCTACACCTCCCCGCAGTCAGAGCAGCTCCTCCAGGGCGGCGTGGGGAAGGCGGCGCAGTGCCGGGGGGAGGGCGACGGTGGCGGAGCGCGGGCGAAACCCTAGGAGGCGGCCGGAATTGGGCGTAATGGCGGCGATTCGGCGGAGGAATCGAATGGCTCGGCGAGGCGAGAGGAGAGAGGAGAGAGGTAAAGCGGAAAGGAGAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0446600.1 | 9 | 19828795 | C | T |
| Osa09LNT0446600.1 | 9 | 19823262 | G | A |
| Osa09LNT0446600.1 | 9 | 19823280 | T | G |
| Osa09LNT0446600.1 | 9 | 19825805 | C | G |
| Osa09LNT0446600.1 | 9 | 19827115 | A | G |
| Osa09LNT0446600.1 | 9 | 19827954 | A | G |
| Osa09LNT0446600.1 | 9 | 19829406 | A | G |
| Osa09LNT0446600.1 | 9 | 19830130 | G | A |
| Osa09LNT0446600.1 | 9 | 19831214 | G | C |
| Osa09LNT0446600.1 | 9 | 19831160 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0446600.1 | osa-miR5788 | Translation | 5.0 | 17.176 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR5802 | Cleavage | 5.0 | 15.263 | 1 | 24 |
| Osa09LNT0446600.1 | osa-miR5815 | Translation | 5.0 | 22.716 | 1 | 24 |
| Osa09LNT0446600.1 | osa-miR5143b | Translation | 4.0 | 16.515 | 1 | 24 |
| Osa09LNT0446600.1 | osa-miR171b | Translation | 4.0 | 19.261 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR171c-3p | Translation | 4.0 | 19.261 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR171d-3p | Translation | 4.0 | 19.261 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR171e-3p | Translation | 4.0 | 19.261 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR171f-3p | Translation | 4.0 | 19.261 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR390-3p | Translation | 5.0 | 21.424 | 1 | 20 |
| Osa09LNT0446600.1 | osa-miR444a-5p | Cleavage | 5.0 | 20.667 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR1441 | Translation | 4.0 | 12.08 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR1441 | Translation | 5.0 | 17.978 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR1862a | Cleavage | 5.0 | 16.76 | 1 | 24 |
| Osa09LNT0446600.1 | osa-miR1862b | Cleavage | 5.0 | 16.76 | 1 | 24 |
| Osa09LNT0446600.1 | osa-miR1862c | Cleavage | 5.0 | 16.76 | 1 | 24 |
| Osa09LNT0446600.1 | osa-miR1320-5p | Cleavage | 4.5 | 17.633 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR2055 | Cleavage | 3.5 | 19.943 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR2878-3p | Cleavage | 4.5 | 15.728 | 1 | 24 |
| Osa09LNT0446600.1 | osa-miR2928 | Translation | 5.0 | 15.863 | 1 | 20 |
| Osa09LNT0446600.1 | osa-miR3980a-3p | Translation | 4.5 | 16.615 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR3980b-3p | Translation | 4.5 | 16.615 | 1 | 21 |
| Osa09LNT0446600.1 | osa-miR5072 | Translation | 3.5 | 19.62 | 1 | 22 |
| Osa09LNT0446600.1 | osa-miR5073 | Translation | 4.5 | 16.781 | 1 | 23 |
| Osa09LNT0446600.1 | osa-miR5143a | Translation | 4.0 | 16.515 | 1 | 24 |
| Osa09LNT0446600.1 | osa-miR5521 | Translation | 4.0 | 19.138 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0446600.1 | 9 | gy9 | Morphological trait | Seed | RM242 | RM215 |
| Osa09LNT0446600.1 | 9 | mrl9a | Resistance or Tolerance | Drought tolerance | RM201 | RM410 |
| Osa09LNT0446600.1 | 9 | Symptoms | Resistance or Tolerance | Other disease resistance | RZ228 | RG667 |
| Osa09LNT0446600.1 | 9 | qCCAI-9 | Physiological trait | Source activity | RM257 | RM201 |
| Osa09LNT0446600.1 | 9 | Ta1 | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Osa09LNT0446600.1 | 9 | Ta | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Osa09LNT0446600.1 | 9 | ta9 | Morphological trait | Culm/leaf | RZ228 | RZ12 |
| Osa09LNT0446600.1 | 9 | Ta | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Osa09LNT0446600.1 | 9 | nan | Resistance or Tolerance | Other soil stress tolerance | R2638 | C1263 |
| Osa09LNT0446600.1 | 9 | yldp9.1 | Morphological trait | Seed | RM242 | RM205 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)