© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0446700.1
GAATGATTATGATGAACGAGGCAACTATTATTCTGCATCCTGGTGACAAGGGGCAAGTTCAGCACTCCAACATGCACATACAGTAGTACAGTGCACAGAGAAACGCAGTTACTACATGATGCACGCAAAGAAAAACATGAGTGTTGTGTTACTGCATTTCATTTCCGCTGTTACTTTCGAGTTTCGACAGTAAAAGGTTCCATAACATGGCAACGGCTGCAAGGCTCAACCACATTTAGTCTAACCGTGGAGGGAACTTTTCCCTCGATGTATGTTCTGATAGCGAAGAGTGCTTTAGAGGCTTCCATGAGATCATCCTTTGGCATTCGCGAGCATCTACCAAGTTTGCCGGGAGAACATCTGAAAGACTCAAAACTGGTGTCCAATGTAAGACATTCGACTGATGTATTCTCGAGGATATGATATGTTAGCTCCAACAAGCTCTTCACGGAGCGGAATCCAGTGATCTTCACATTCCGGAGGTTGTCATGGCGTTGCTCTGGCAACTGCCTTAGATGTGAGGGGTTCTCGAAAATTGAATCGTTCTCTGGGTGTTTTGCGGATACATCCACGATGAAAGTGTCCAAGGAAGGGCAGGCATCGAGAAAGGAAACCAGAGACAAATAATCATATGATGGAGAGAGAGTTACTGCAGAAAGAGTAATACACAAGTACTTGAGATGGAGGAATGTGTTAGGCACCATTGGTGTACTGACCATCTCACCCAATGAGCGTATGGTAAGAGTTTCGAGGTTTGGAAAAATATATGGTAGCTCCGCGCAAGCATGATTGAGAACAGAGGAATACCCAATACTTAGGTTCTTCACCAGAGATGACTCTCCAAAGGAGAGTTGTATAGGGTGATAAGCTTGATAAAAAATGTGCAAACTGTGAAGGTTTGGAGCTTTGTTCTCTATTACTCGCAGCCTGGAGCATCCACGCACTTCCACATAGGTCAGCCGCTGTAGCACACAAGGCAACTTCATGTATTTTATATGACGGCAAAGCCGGAGTTTCAACCACTCCAAAGCAAACGAAGCGGAAAAAACGCACCCCAATTCATCCCCCGTGATTCTCACATACTCCAGATGCAGCCTCGTCAAGCTTTGAAAGCAACCAATCTCCGCAGTGGGGTGAAAGGTACAGCAGTAAAGATCAAGAAGCCGAATCGAGCTTCCACTCCCATCAGATAGAAGTGAGCAAGGAAAGTCATAATATGCTTTTCCCTTGGACATCGAGAGGCTGAGCTCTTCGATCCTTGGTGTAACAGCAATTTGAAGCCATCTTTCGAGGTAACTGCGTGCTTTGGTACTGAAGAGACCATTGAACTCAATCGTAAGAGCCTTCACACCAATGCCTGAGTGTTTTTCCATAACGCGATCAATTTTTCTGATGAAATCCGTTGTACCTTCAACGATACCCATCGTTTCAGTACTAAAGGAGAGTTTGGGACGGTTTCTCCATGAGTATAGAAAGGCAGAAGACAAGCAGGCAGCACGGGCAGCGTCTTTCATTGGCATAAGGGAATGTATATGCTGCCACATTTCCTCAGGAAGGTATGGACCTGAATATCTCATCTTTTTGCCACTGCGAGGACTGTCATCTTGTTGATAACATGAGCCCTTTCGTTTCTCTGGTGAGGCAATAGACTCATCTGCAACAACTAAAGGTTAAGAATATAGTACATGCGTCAACAGGAGAAACAAGAAATTAAGCATTATGATGCAAACAATACATGCTTGGTCTAGTGTTTGAGTGGATGCTGATTCCTACTCTCAAAACCTTTAGTAGATAAGCATCATTATTTGGTCTTCTTAATTACAATCTCTTTTATGAACAGATGCAGACTGGGGGTAAACGGGAGCTCATGTGCTCAACCGGAGAACTTACCTGCTCAAACATAAAAATGTATTCGCAAAAAGATCATATGGTCGAAACTAACAATCTAAAGGAATCTCAAACATAAAGAGGTACTTGCAAAAAGATCATACGGATTGAAACTAACAATTGAACTAACAATCTAAACGAATCAGTTTCACCTACTCGCAAAAGAGAGAGGAAACTACAAAATCGAAATCCGAGTCTTGCTGCACAATGCTGAAGTACATTCTCTGAGCAAGCAATAGATGAGAAACCCCATTGTTTAGCTTATTCATATGCTTATCCGAATCGCTTATTAGCAAATAAAAAATCATTTGTGAATAAAACTTTTATATTCGTGTCCTTAGCAACTCAAAAGCAAATGTTGTCAAATAAACTAAGATGAAAAAAAAATCAACATTAAAATTAAGTCCTAAATTCAATTTTTGGCTTATAAGCATAAGCATAACAATGAGGCCGGCATGAATAATTTGCATTGTCACATGAATGGCAGAACTCATTGCATCCTCACATGAATAGCAGAGCAGACAAGCTGAGACAGGAAAAGGCGACTTACCGGGAACTAGGGCATGTCGACTACGACGACGACGACGACGCTCTCGCTGCAAGCGCTTCAGCAGCACATACCCCAATCCCATGACCACGAACCCACGATTGCTCGTCCGTCCACGAATCGAGGAAACCGGCGTCGACTTCCGTTTTAGTCTCCTACTTATTTGCTCTCGGAATCTGTATCTTGTGAAGGAAAACGAGGGAGAGAGACCACATAGGCGCCGCCGAGCGAGATTATTTCTCAGCAATGGGCCTCCCAATTTAGGGAGAAATCGGAATTAGGATTCCTGAATTCGCGGTTGAATATCTGAGTCTCCAGCGCCAAGCTCCATGGAGACCATGGCGATTCGCGAGCACCTGGGCGGGCTCCATGGAAACCCGCGTCGAGCTTGCCGACCGTAGGGGAGAACCGGAGAATGACGCGGGCGGACGCCGCGAGGTTCTGCGGCCTGCGACCGCCGCCGCGTGCACGCGGGTAGCGCGCGCTCGCTCTCGCCCCTCGCGGCGCCGCTCTGCGCCGGGTGGGTGAGACGAGCGGAGCGCCCCGCGGCGGTGTGTGTGTCGCTGGAGGCGGGTGCTGCGGCGGCGGCGGGCGGCGGGGCGGGGACGCCAGCCAGGTTCCTCTCCGACCGGATGCATGCGTCGATGGCGGCCGCGCCCTACGCCGCCGCAGCAGCCATCCAGGGTGCCCGTTGAGGGGTTTCCCACTTTCCCTCGATGCAGGCGGCGGCCGATGAGATCGCCGCGTCGTGGAATGGCGGGGGATGACGCCGACGACCCGCTTCTCTGGGCTCGATTACTCCATCCATGCGGCCCCGTGACCCACCGGAGCGGAGGCCGACGGCGGCTCAAAGTCGAGGCGCTAATGCTACCAGCTCGTCGGAGTCGCCGGTGGATTGGAGAGGATCACGGCGAAGTGGGGACCTCTCGGATTCTGGAAGGAGATGGGTGGGTCCACCTCGTCTATCTGAACTTCCTACTGACAAGTGGGTCCGCTTATTTCTAACCGTTGGATCAACTTAAGCGATAAGGATTGAATTCGCGTTCGCGGGCCAAACCGTTACGGCCCAACAAAATAATCTCTGCTACCCTCGGTTTCTTCGCGTTCTGAGCATCTCCAACAGTCTACCCAAATCACACTCTTCAAATACCTATATAGCCAACTCTTCAATTGATTTAGCAAGTTAAACCTGTTGCTCACTCCAACAGCGTCTCCATCCACCCTCTCTATTTTAAGTGTATGACACTGGGACCCGTATGTCAGTCTCTCACTCCTTCCTCCTCCACTTTCCTCCCAACTACATCACCGATGGCAGGCCACGAGGAGGGAAAAGCCGGCAGGGGGCACCGCCGGCGAAGGGGCGACGCCGGCGAAGTCGTGGCGGCGTCGTAGGCGCGGGCGGCGGCCTCGGCGGAGTCGCGGTGGCGTCCCTCGTAGGCGCGGGCGGCGGAGTCATGGCGGCGACGTACGCGCGGGCGGCGGCCTCCGCGGAGTCGTGGCGGCGTCGCAGGTGCGGGCGGCGGCCTCGGCGTAGTCGCGGCGGCGTCCCTCGTAGGCGCGGGCGGCAGCCTCTCGTCGGAGTCGCGGCGGCGTCCCTTGTAGGCGCGGCAGCGGTCTCATCGGAGTCGCGGCGGCGTCCCTCGTAGGCGCGGGCGGCGGCTACCTCCCCTTCCCCCGACCCCAGCCCACCGCCATCACCTCGAGGTCGGCGGCGCGGAGTGCGCGGATGGCGACGGCAGGGCCGGCTCGTCGTCGTCGTCGCCGTTGCCGTCGCCGCCCCGCTCCAGATCCCGAATGGTCGAGGGGAAGACGAAGTGCGGCGGAGCCGGAAGGACGACGGCGGGGGTGGTGCCGGGAGAACGACGGCACCGGGAAGACGGCAGCGGCGGCGCCGGGAGGACGACGGCGGTGGCACTGGGCGGAATAGGCGGCGGGCAAGAAGGTAGCCGGGATGGGATAGGGAAAGGGGGAGAGAGAGAGAGAGGGGTGGGACCTACACCAGATGGCCAGCCGTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0446700.1 | 9 | 19855604 | A | G |
| Osa09LNT0446700.1 | 9 | 19856448 | A | G |
| Osa09LNT0446700.1 | 9 | 19858050 | A | T |
| Osa09LNT0446700.1 | 9 | 19858199 | A | G |
| Osa09LNT0446700.1 | 9 | 19858354 | A | G |
| Osa09LNT0446700.1 | 9 | 19858803 | C | T |
| Osa09LNT0446700.1 | 9 | 19858962 | T | C |
| Osa09LNT0446700.1 | 9 | 19859015 | A | G |
| Osa09LNT0446700.1 | 9 | 19855891 | G | T |
| Osa09LNT0446700.1 | 9 | 19855608 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0446700.1 | osa-miR156c-3p | Cleavage | 3.5 | 10.404 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR156f-3p | Cleavage | 4.0 | 10.404 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR156g-3p | Cleavage | 3.5 | 10.404 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR156h-3p | Cleavage | 4.0 | 10.404 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR167a-3p | Translation | 5.0 | 18.394 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR156l-3p | Cleavage | 4.0 | 10.404 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR172a | Cleavage | 4.5 | 10.419 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR172b | Cleavage | 4.5 | 10.419 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR172c | Cleavage | 4.0 | 10.419 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR172d-3p | Cleavage | 4.5 | 10.419 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR418 | Translation | 3.5 | 16.491 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR812a | Translation | 4.0 | 14.373 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR812b | Translation | 4.0 | 14.373 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR812c | Translation | 4.0 | 14.373 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR812d | Translation | 4.0 | 14.373 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR812e | Translation | 4.0 | 14.373 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR1425-5p | Cleavage | 5.0 | 24.884 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR1425-3p | Translation | 5.0 | 17.007 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR1858a | Translation | 4.0 | 11.486 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR1858b | Translation | 4.0 | 11.486 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR1864 | Cleavage | 5.0 | 16.728 | 1 | 24 |
| Osa09LNT0446700.1 | osa-miR2101-5p | Translation | 5.0 | 11.586 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2105 | Cleavage | 5.0 | 14.662 | 1 | 20 |
| Osa09LNT0446700.1 | osa-miR2118a | Cleavage | 2.0 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118b | Cleavage | 3.5 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118c | Cleavage | 4.0 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118d | Cleavage | 5.0 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118f | Cleavage | 4.0 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118h | Cleavage | 4.5 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118j | Cleavage | 4.0 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118k | Cleavage | 4.5 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118m | Cleavage | 4.0 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118n | Cleavage | 3.5 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118p | Cleavage | 4.5 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2118q | Cleavage | 4.0 | 18.306 | 1 | 22 |
| Osa09LNT0446700.1 | osa-miR2871a-3p | Cleavage | 5.0 | 6.792 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR2871b | Cleavage | 5.0 | 6.792 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR2873a | Cleavage | 4.5 | 8.611 | 1 | 24 |
| Osa09LNT0446700.1 | osa-miR3979-5p | Cleavage | 5.0 | 11.389 | 1 | 20 |
| Osa09LNT0446700.1 | osa-miR5486 | Translation | 5.0 | 21.161 | 1 | 21 |
| Osa09LNT0446700.1 | osa-miR1852 | Translation | 4.5 | 14.631 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0446700.1 | 9 | nan | Resistance or Tolerance | Other soil stress tolerance | R2638 | C1263 |
| Osa09LNT0446700.1 | 9 | yldp9.1 | Morphological trait | Seed | RM242 | RM205 |
| Osa09LNT0446700.1 | 9 | gy9 | Morphological trait | Seed | RM242 | RM215 |
| Osa09LNT0446700.1 | 9 | mrl9a | Resistance or Tolerance | Drought tolerance | RM201 | RM410 |
| Osa09LNT0446700.1 | 9 | Ta1 | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Osa09LNT0446700.1 | 9 | Symptoms | Resistance or Tolerance | Other disease resistance | RZ228 | RG667 |
| Osa09LNT0446700.1 | 9 | qCCAI-9 | Physiological trait | Source activity | RM257 | RM201 |
| Osa09LNT0446700.1 | 9 | Ta | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Osa09LNT0446700.1 | 9 | ta9 | Morphological trait | Culm/leaf | RZ228 | RZ12 |
| Osa09LNT0446700.1 | 9 | Ta | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)