© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0447800.1
TTACTATTGAAAAGCAAGGCCTATGTTCTGCTTTTCCTTGACTGTGCCCCTGTACCTACTCTCCTCCTAGTACTTCGTCAGAAATGAACACCTCACGGTGCTCTGCCTCTAACCTGCCCCACAAGTCCAGTAAATCACACGCAAACAGACAGCAATCTACGGCGAGAGGAGGAAACGTCAGTGTCGCACTGTCGCAACAACCAACAAAAGCTTGACTCTCACACTCCAATTCTAACGTACCCACCAGATTCCAGAAACCACACTCGGGTTAACTTCCAAGACTACACCGCCACACCGGGAGGAAGCATCAGATGAAACATCAGCATTCACACAATACAATGGTTCCGTGCGTCAGCAGCAACATTTACAACATCGATCATAATGTGCACTTGTCAGTATGTCAACGCCATTTTAAACCGCGCCGGCGACCGGCGTCGGCGTCAGTGCCACGCGTGGTGCCTCCGATCACCGTGCTCCACGCCGCCGCAGCCGCCACCGTCCCGGACGATGATCTCCCCCGGCGGCAGTAGCGCAACCGCCTTGCCACCGTGGCGCCGGTGCTTGTTGAGCTTGAGCCCGTCCCTGTGCTGCACGCCGAGCGCCGCCTCGTGCCTGCCGTGCCGGCGGAGGATGACGTGCTCCGCCGCCGCCGCCGCCGCCACCGGGTCGTCGTCGTCATGTATGTGGAGGACGTGGTGGCGGCGGTGGCCGGCAAGCTCGGTCTTGTGCCTCTTGTGCGCGTCGTGGTGGTGGGAGTGCCTGTGGCTGTGAGCTCTCTTGTGCCTCCGGCGCGCGCGCTCCTGCGCCTCCGACCCGACCACGCCGTCCCACCAATAGTACAGTGGATCGAAGAGCCCTTTCCGGTGCAGAAGCCACAGGACTGCGACAAGTAGCAGGCCGTGGATGACGAACTTGAGGAAGCTCCAGCATCTCGTGCTGCATGTTGTACCAGTGAAGAAATTAATCAGCATGTGCCACATTTTGGCGCACCAGGCTTTGATGGCTTCAAAGAAACCCCAGATGCCACCCTTTGTGTGGTTTTCGGACGAACCAATCTGTGTTCCATTGTTAAGAACTGTAGCTGTGGTTGAGAATTGGGATTCTTTTCTGTCAAGTTCACTGAAATCTGACGCCTTCAAAATAGCTTGACATGTATAGTTCGATGCTTGGTCTGTTGACGAACGCAAATCAAATGTCCGAATAAGCTTTTCATCAGGCTTCATGATAAAGTACTGCTCCTCAACGGGATTGATGCCGCTTAAGCAGTCAAACGTCAAGCTATATGAAGCTTCAAGTCTTCCAATATTCTTGGTTTTGACTCTAGCACTGCCAACTTGACTTAAGGCTTCAAACGAAGAGATGTTAATGCTAATTATCTTCCCTGAGCTTCTCTGATAGACATATTCTATGTCATCAGCACTCAGCTCTATCATCAAATTGGTATTGAGAACTTCTGGGATTCCCACAGAAAAGGTATGAACTCCTGCATTCGGATATTGGTTGATCCTTTCAAACTTTCCCAGAACAACGTATTGGGGTGGTTGGCTATTGTTTACCCTGTTTTTGTCAATCTCCCAAAATTTGGAAAGCTGATCGCCCAAGCAGCTGTCAAGTGGCGATGAACAAAAGTTAGGCTGGCTCCTGAAAGCTTCATAGCCAACTCCAATCTTATTACATTCAAGACCATCTAATGTAAACAGGACTCTCTCCAACAGCATCCACCTGGAAAAGTCATCACCAAGCACTTCTAGTTGACCACCGCCAACACCCTTCAACATTTTAGATTTAGAAGCACAATGAAACTTCATGTGAGGGAAATATTCTTATCTAAAATTTTCGATTACCTTTCGTGGAGTCACAAGGTAGAAGTTCTCCAAAGATGGAAGACTTGTATAACCAGCAAAGTCGCCAACTAAATTTACTCTCAGGGAGCTGTCTTCAGAAACAACTGTTCTATTTTCTGGACCAACAATAACCTCAGATTCAGAAGATCCTTTCTTTACTTGCACTCTGATACTGAACCAAAGGGATCTTCTCCCAATATCAAAAACATGAAACCAATCATCTGGAAAACGTAGACAGTGAGCTGTGTTAGCTTTTCCTTTCGCCACTTTATCAAGAATGTTTCCACAAGATGAAGGGACACGGCGGTGAGGCCCACAAGGGCAGCAAACAGGCTAGAACCATGCAAATGCAAATTAAGACAAGATTGTAACCATCAAGACATAGTAAATATATCTGATGTCAAAATAATAACACAAACAACATAATGCTATCGAGTCTGAGCACACAGATGTATATTGTCAGGAGCTTCAGGTGTGTGGTGTGTCTGTGTTTTCCTTAATATGAAGACTAGTATATTTAAATATTTCAACTGCTTAGACAGTGAGATAATAAGGGTGACAAGGGGAAATGCTTCTCACTTCTGTATGCTCAATTATGCTACCTTTCTCATCCCGTAACCTAGCATATCCAGGAAGATTGCATCATCAGTATATACAACAATTATTATATTTGAAGCATTGGATGAACAAAAAAACAGTACTTAGGGGTTAGGATGTTTCAAATAGATTGCTTGAATTATGTGAAACTAAACTGTATGCTATTGAAATAAAGTCATTCCCAACAGTGGTAGTAGATTACATATTGTCCATATTTGACAGCAAATATGGTATAAGATAGAAAGATGAACTGGCAATTGTGATGTGATGTCTACCAAGTACCAACTTGGATCCTTCCCAAAAGAAAAGTGATGAAGATTGAAATCCTAAAATGAATTACCTTTCACAAGATTTGACAACGTTCGCACCAGCTTCAGGCTCACATTTACGTGTCTTCACAAATTTTTCTTCAGGTTTGTAAGCAACATCCCTGAGGTAAGTGAGATCGTAGAGCGCATACACCTCGGATTTGTTGATGGTGATGATGAGGGGATCCCGGATGGGCATCTCCCCCGCCTCCGTGCCGTTCTCCTCCACCTCCGCCACCCGCGCCACCAGCGACGCCTCCCCGCCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0447800.1 | 9 | 20545350 | A | C |
| Osa09LNT0447800.1 | 9 | 20545364 | G | T |
| Osa09LNT0447800.1 | 9 | 20545651 | G | A |
| Osa09LNT0447800.1 | 9 | 20546231 | C | T |
| Osa09LNT0447800.1 | 9 | 20545513 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0447800.1 | osa-miR5837.1 | Cleavage | 4.5 | 16.946 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR5837.1 | Translation | 4.5 | 17.034 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR156a | Translation | 5.0 | 18.743 | 1 | 20 |
| Osa09LNT0447800.1 | osa-miR156b-5p | Translation | 5.0 | 18.743 | 1 | 20 |
| Osa09LNT0447800.1 | osa-miR156c-5p | Translation | 5.0 | 18.743 | 1 | 20 |
| Osa09LNT0447800.1 | osa-miR156d | Translation | 5.0 | 18.743 | 1 | 20 |
| Osa09LNT0447800.1 | osa-miR156e | Translation | 5.0 | 18.743 | 1 | 20 |
| Osa09LNT0447800.1 | osa-miR156f-5p | Translation | 5.0 | 18.743 | 1 | 20 |
| Osa09LNT0447800.1 | osa-miR156g-5p | Translation | 5.0 | 18.743 | 1 | 20 |
| Osa09LNT0447800.1 | osa-miR156h-5p | Translation | 5.0 | 18.743 | 1 | 20 |
| Osa09LNT0447800.1 | osa-miR156i | Translation | 5.0 | 18.743 | 1 | 20 |
| Osa09LNT0447800.1 | osa-miR156j-5p | Translation | 5.0 | 18.743 | 1 | 20 |
| Osa09LNT0447800.1 | osa-miR164a | Cleavage | 5.0 | 14.821 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR164b | Cleavage | 5.0 | 14.821 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR164d | Cleavage | 5.0 | 14.821 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR166h-5p | Translation | 4.5 | 16.527 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR408-5p | Cleavage | 5.0 | 16.413 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR408-5p | Cleavage | 5.0 | 10.962 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR164f | Cleavage | 5.0 | 14.821 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR390-5p | Translation | 4.5 | 20.051 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR535-3p | Cleavage | 4.0 | 12.56 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR1850.3 | Translation | 4.5 | 16.092 | 1 | 22 |
| Osa09LNT0447800.1 | osa-miR2102-3p | Cleavage | 4.5 | 20.099 | 1 | 22 |
| Osa09LNT0447800.1 | osa-miR396f-3p | Translation | 5.0 | 14.801 | 1 | 24 |
| Osa09LNT0447800.1 | osa-miR2864.1 | Cleavage | 5.0 | 22.111 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR5338 | Translation | 3.5 | 10.653 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR5338 | Translation | 5.0 | 17.561 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR5509 | Cleavage | 3.5 | 24.291 | 1 | 21 |
| Osa09LNT0447800.1 | osa-miR5513 | Translation | 4.5 | 15.745 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0447800.1 | 9 | gy9 | Morphological trait | Seed | RM242 | RM215 |
| Osa09LNT0447800.1 | 9 | qMXN-9 | Morphological trait | Root | RM201 | OSR29 |
| Osa09LNT0447800.1 | 9 | nan | Morphological trait | Root | RM160 | RM3808 |
| Osa09LNT0447800.1 | 9 | mrl9a | Resistance or Tolerance | Drought tolerance | RM201 | RM410 |
| Osa09LNT0447800.1 | 9 | qCCAI-9 | Physiological trait | Source activity | RM257 | RM201 |
| Osa09LNT0447800.1 | 9 | Symptoms | Resistance or Tolerance | Other disease resistance | RZ228 | RG667 |
| Osa09LNT0447800.1 | 9 | Ta1 | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Osa09LNT0447800.1 | 9 | nan | Resistance or Tolerance | Other soil stress tolerance | R2638 | C1263 |
| Osa09LNT0447800.1 | 9 | Ta | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Osa09LNT0447800.1 | 9 | Ta | Morphological trait | Culm/leaf | RZ228 | RG667 |
| Osa09LNT0447800.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | RZ12 | RG667 |
| Osa09LNT0447800.1 | 9 | nan | Resistance or Tolerance | Drought tolerance | RZ12 | RM201 |
| Osa09LNT0447800.1 | 9 | yldp9.1 | Morphological trait | Seed | RM242 | RM205 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)