© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0450600.1
GCATCAATACCAATAAATTATTATTAGTAGGCGCTCATGTGCCATCAAATTAATGAATACACATCATGCCTCTGAAACTGATTCTGCTAATTCATGATGAGATTTCCAGAGTTGACAACAAATCACATTTTCTTCAGGCGACAATGGGAAAATGGGTTCTAGACTAACATCTTCACTCGGGTGGAAAGATACATTCAAAGCTTTCCAAGTCAGAACAACATATTCCTTTGACTGCACACAGTACCTCCAGTCACTAGCTAAACAAATGGAGAACAGGAATCGGGGAATCACCGACTGTAGGCGCTACTCCTATGCTCGCCCAGATAGGCGAATATGTCAGTGAATTGCATAGGGGCAATTTACGAGACATGTGTTCAATTTGTTTTACAGGGCCATGCGTCCAGCAAGCCGACTTTCTGATATTCTTCGATCAATTGCTGCATCAACTGAGTTCATCTGGCTAGTTTCATCATGCACCTGATACTTGGGTAGCGACAATCTTCTTTCCTCCATTGACATTGCTTCATCATCCCACACCAGATAGACTTCATTTGCACCAGGTTGGGTGGCTGGTGCTTTATTATTAGAAGCGGGTGGAGGTACAGCCGCTGGACCTCCTGTACCTTGGTTAGTAGCTGCATATCCTACTCCTGCAGGAGCAACTGATGGAGAGCTTGTTGGGATGCTTCCAGGTGCAACAGATGCTACATATGGAGAACTTACTGCACCGTTTCCAGCAGATGTACTGACAGGAAAGAGAGGTTGTGACACCTGAGGGGTAACAGGTGAAGGTACTCCAACATGGGCCATAGGGAACGAAGTCTGAAGTAAATTTGCAGGTGCTGATGTCATAGGAGCAGGCATGTTTTGAATTGGAAATAGTGGCTGTTGTGGTGCAAGCCCAGAAGCCATTTGAGGAACCGAAACTACTGGTTGTGTAAACCAAGGTTGCGGAGGTGGAGCAGGCCAGATTGGAGGTCTGGCCATCAATGGATTCAGTGCAGGGTTATACATAGGTGGAGCTACACCATAGGCCGGTCGTGGAGGATATACCATGCCCGCTGGATTGGGCATAACAGGAGGCCTTAGCGATGGCACTTCCACTTTGGCTACCTTCGATGAAGGGTCTTCCTCTTCTCCATAGTGGGCGGCCAACACATCTGGAGGAATCCCTTGCATCCCAAAGATCTCAATCTCTGTTGATTCCCTCTCAGGCTTTGCATTGGGAACCTTGGTGACGGACTCCTTGTGGACCTGGAGGACGTGGATGGCCATGCCGCCGGCGGTGGAGAGCTTCTTGTGGCAGACGTGGCACTTGAAGTGCTTGGCCTTCTGGTGCTGCACGAGGATCTTCTCGTCGTCGAACTCGCGGTCGCAGTAGTAGCAGAACACCTTCTCCACGCGCTTCTTCTTCTTCCCCATCACGCGCGGTTCCCCCTCGTCCCCCTCCCCCTCCTCTCTCGCGGGCGATCGACGATTCTAGGGTTAGGGTTTCGGCGAGGCGAGGCGAGGCGAGGGCACGAGCGCGGCGGGGGGAAGACGAAGACGAAGGCGAGGCGGCTCTCTCCTTTGGTGTCGGATCGGGAGGCTGGCGTGTGGGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0450600.1 | 9 | 22288495 | G | A |
| Osa09LNT0450600.1 | 9 | 22288470 | A | G |
| Osa09LNT0450600.1 | 9 | 22287373 | G | A |
| Osa09LNT0450600.1 | 9 | 22287645 | G | A |
| Osa09LNT0450600.1 | 9 | 22288807 | C | A |
| Osa09LNT0450600.1 | 9 | 22290555 | A | C |
| Osa09LNT0450600.1 | 9 | 22290620 | A | G |
| Osa09LNT0450600.1 | 9 | 22291024 | A | G |
| Osa09LNT0450600.1 | 9 | 22291181 | C | T |
| Osa09LNT0450600.1 | 9 | 22291596 | G | A |
| Osa09LNT0450600.1 | 9 | 22287713 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0450600.1 | osa-miR5143b | Cleavage | 5.0 | 13.387 | 1 | 24 |
| Osa09LNT0450600.1 | osa-miR5820 | Cleavage | 5.0 | 11.829 | 1 | 21 |
| Osa09LNT0450600.1 | osa-miR169d | Translation | 3.5 | 23.511 | 1 | 21 |
| Osa09LNT0450600.1 | osa-miR535-3p | Translation | 5.0 | 20.421 | 1 | 21 |
| Osa09LNT0450600.1 | osa-miR815a | Translation | 5.0 | 14.383 | 1 | 21 |
| Osa09LNT0450600.1 | osa-miR815b | Translation | 5.0 | 14.383 | 1 | 21 |
| Osa09LNT0450600.1 | osa-miR815c | Translation | 5.0 | 14.383 | 1 | 21 |
| Osa09LNT0450600.1 | osa-miR2090 | Cleavage | 3.5 | 23.585 | 1 | 22 |
| Osa09LNT0450600.1 | osa-miR2096-3p | Translation | 3.0 | 17.585 | 1 | 21 |
| Osa09LNT0450600.1 | osa-miR5143a | Cleavage | 5.0 | 13.387 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0450600.1 | 9 | qTN-9-2 | Morphological trait | Culm/leaf | RM215 | RZ404 |
| Osa09LNT0450600.1 | 9 | Spk(t) | Morphological trait | Culm/leaf | nan | nan |
| Osa09LNT0450600.1 | 9 | nan | Morphological trait | Root | RM215 | RM205 |
| Osa09LNT0450600.1 | 9 | yldp9.1 | Morphological trait | Seed | RM242 | RM205 |
| Osa09LNT0450600.1 | 9 | nan | Morphological trait | Root | RG667 | RZ404 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)