© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa09LNT0451500.1
AGTTTAAAATCCAATCTCATATATAATATCGTGGGGGTGGTACAGTTTCATGTAGATATCTTTTCATGGAGTGCTACTGCTAGCTAGGGGAACTTGGTCACTGATAATAATAACTACAGCAGGTGATCATGCAAGTGCAAACCAAGATAATACTCCCTCCGTTTCATATTATAAGACTTTCTATCATTGCCCACATTCATATAGATGCTAATGAATCTAGACATATATATGAATGTGGGCAATAATAGATAGTATTATAATATGAAACGGAGGAAGTATATCTTATGCATGTGCACCGCCAACAAACCAGCTAATTACACTATACATACATGCTATGCTGGCTGGATCTTGCTGTTTCCTCATTCTCCAGAGACCCCAAGAAGAGGACGGTACATCTGCATATGGGCTATAGCATCAGATGTAGTTGATGGAGATCAGGTACAAACATCCGTGACAAGCATCCAACTTAACTAAGAGAGAGAGATCAAGAGATGATGATGCAGTCGTCGTCCCCGTTAGGCTGGGCAGTATAGTTTAGTAACAGCCGAAGAAATACTAGTAACTAGCAGAGTGATGGTATCTCCTCTCCGGGCCAGGCAGCAAGATCAAAACTACTCAACTCAACTCAACTCAATCGTCCACTCCGGCCTTGCTCCTCAGGTGCTCCTTGAACTCCATGATGTCACCTTCCCACCTGGTCACCGCCTGCTTTTCGCACACCCATATCTCCTGCGCCACTTGGTTGATCAGCCTGAAGTCATGGCTCACCAGCACAAGCCCTCCATCCCATTCATTCAGCGCCTCTGCAAGAGAGTCGATTGTTTCAATGTCCAGATGGTTCGTTGGCTCATCCAGCAGCAGCATGTGTGGCTCCCTCCACGCCAACCATGCAAATATCACTCTGCTCCTCTGCCCGTCCGACAGGTTCCTCATTGGCATTACCTGTGCCTTCCCTGACAACCCAAACTTGCCGATGGCTGCCCTCATCCTCTCCTCCTCGTTCCCTGGGTATTCCTTCATCATGTACTGCAGAGCTGACATGTCCAGGTCCAGCTTCTCTGCAAGGTGCTGGTGGAATTGTGCGATCCTGAGATGGTTGTGTCGCCTCACCATGCCGTCCAGCGGTATGAGATCACCTGTCATGAGTTTAAGGAGCGTACTCTTCCCAGCCCCATTAGGACCAACCAGCGCCACCCTTGAGTCAAGGTCAACACCAAAATCTAGGTTCTTGTAGATCAGGTTGTCTGGTGTGTACCCAAATGTGACCTCCACAAACTGCAGCACTGGAGGTGGTAGCGTGCCAACATCAGTGAAGCGGAACGTCAATACCTTATCCCTTACAACCTTCTCCGTGAGCCCACCACGCTCCATCTTAGCAAGAGTTTTCTCTTTACTTTGAGCCTGTCGGGCCAGCTTGGCAGATCCGTGACCAAACCGTGCAATGTACTCCTTCATCGAGGCAATCTGGTCCTGCTCCCATCTGTATTGTTTCATTTGATTTTCTTCAAGCTCGGCTCGTGTTTGGACATACTGGTCATAGTTGCCAGTGTATAGCTTGAGCTTCCTGTTTTGCATGTGGATGATATTTGTACATACTCCATTTAGGAAGTCCTGGGAGTGTGATATGACGACAAGTATACGGTCAAATTTCTTCAAGGTTTCCTCCAGCCAGACACAGGCCTCAAGATCTAGATGATTGGTGGGCTCATCAAGCAAAAGGATAGTTGGATTCATGAAGAGCGCCCTAGCCAAAGCGATCCTCATGCGCCAACCGCCAGAGAAATCACAGGTTTTCTTTGCCTGCATGTGCTTGTTAAAACCCAAGCCAAACAAAATCTCTGCAGCACGCTTTTCAGCGGTGGATGCGTCGATGGCTTCTAAGCGTTCATAAACGCGGTCCAGGGCTTCGCCGCCACCGTCATCTTGAGCGGCCAAGATTTCAGCCTCCTTCTCGAGCTGGAGTCTCTGTTCGTCACAGCTGATGACAGCTTGTAGCGCAGACATGTCGGAAGCCTCGATCTCATGGGTGAGATGATAGATGTCCATGTGTGGAGGGATAGGAAGCTCCCGGCATCCTATAGCTTTGAGGAGACAGGACTTTCCACAGCCGTTTAAGCCAAGCAAACCATATCGCCTAAGAGACGAGATGAATGGTCTCTATAGTACTAGTACTTACTTACAGATGATGGATTGATTGATTGATGAAAAAAATAATAAAGATTACCTGCCGTAGTTGAGCTCCAGGTCGGTGTCAAGAAGCAGGTCATGGCCGTGGAATGTGAGGGAGAGGGACTCGATGTGGATGTCGCGGGAGAGGGGATGGGAGGTGAGGACGGCGGTGCAGGTGCGCTCGGAGAGAGTAATGGCGGCCTTGGCCTTGTCACCCCTCTTGGCAGCGGCGGCGGCCTTCTTCTGCGCCGCCTTCTTCTTGCTGGCGTCGGACACCATAGCTGATGCTGGTGCACAGAGAGAAATCGAGAGATCGATCGAGAAGAAACACAAGAATGAGAGAGAGAGAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa09LNT0451500.1 | 9 | 22883302 | T | C |
| Osa09LNT0451500.1 | 9 | 22883391 | C | A |
| Osa09LNT0451500.1 | 9 | 22884030 | T | C |
| Osa09LNT0451500.1 | 9 | 22884528 | T | C |
| Osa09LNT0451500.1 | 9 | 22885696 | G | A |
| Osa09LNT0451500.1 | 9 | 22886634 | G | A |
| Osa09LNT0451500.1 | 9 | 22884365 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa09LNT0451500.1 | osa-miR5798 | Cleavage | 4.5 | 20.007 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR5825 | Translation | 4.5 | 18.89 | 1 | 24 |
| Osa09LNT0451500.1 | osa-miR6247 | Cleavage | 4.0 | 17.543 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR818f | Translation | 5.0 | 14.387 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR7693-3p | Cleavage | 5.0 | 21.604 | 1 | 22 |
| Osa09LNT0451500.1 | osa-miR160a-3p | Cleavage | 4.0 | 19.92 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR160b-3p | Cleavage | 4.0 | 19.92 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR160c-3p | Cleavage | 4.0 | 19.92 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR160d-3p | Cleavage | 4.5 | 19.92 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR394 | Cleavage | 4.0 | 23.727 | 1 | 20 |
| Osa09LNT0451500.1 | osa-miR160f-3p | Cleavage | 4.5 | 19.92 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR166k-5p | Cleavage | 5.0 | 12.614 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR171d-5p | Cleavage | 5.0 | 22.747 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR166h-5p | Cleavage | 5.0 | 22.422 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR171i-5p | Cleavage | 4.5 | 18.921 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR530-5p | Cleavage | 4.5 | 23.095 | 1 | 20 |
| Osa09LNT0451500.1 | osa-miR530-5p | Translation | 4.5 | 12.068 | 1 | 20 |
| Osa09LNT0451500.1 | osa-miR1439 | Cleavage | 4.0 | 16.02 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR1846d-5p | Translation | 5.0 | 13.892 | 1 | 22 |
| Osa09LNT0451500.1 | osa-miR1857-5p | Cleavage | 5.0 | 19.929 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR1865-5p | Translation | 5.0 | 16.607 | 1 | 24 |
| Osa09LNT0451500.1 | osa-miR1436 | Cleavage | 4.0 | 16.353 | 1 | 21 |
| Osa09LNT0451500.1 | osa-miR5161 | Translation | 4.5 | 14.343 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa09LNT0451500.1 | 9 | nan | Morphological trait | Root | RG667 | RZ404 |
| Osa09LNT0451500.1 | 9 | yldp9.1 | Morphological trait | Seed | RM242 | RM205 |
| Osa09LNT0451500.1 | 9 | qTN-9-2 | Morphological trait | Culm/leaf | RM215 | RZ404 |
| Osa09LNT0451500.1 | 9 | nan | Morphological trait | Root | RM215 | RM205 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)