© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0042000.1
TACCATGGAGAAAGCAATATGATCAAACAGAAACCGCAAAGGATTAGTGCCTACAAATTGTCTTGTTTGCTCCATTATAGTCCAGCAGTCACGAGCACAAAATAAACAGAAACAGGCAAATGCTTAAAGTCTCTAACACCATTACACCAAGTCAGTTCCAAGGGAAGATAAAATGCAGGCTTCATGCGGCCGCGAAAGGATGGAAGCACACCCTGCAGGACTCTAGAAATCATCGTAGTCATCATCATACTCATCGCTATCAGTTTCAGGGTTACTGTCAGCATAACGGCTTTCGTCGACCCATTCTGGGTTTTTCTTCGCCATCTTCTCGAAGTTGCACAGCTCCTTCTCCCGCTCCTCTATGATGCGCCTGTTCTCAGCCCGCTCCATCTCTTCGATATCTTCATAGAAATTAACCTGTATCTTCTTTGGGTTAATCCCATTTGCTGCCAGAACATTCACCAGCTTGTTGATCCCATCATCGCCCTTGGAACATTGTATTATGACAGTCTCAAGGAACGGACATTGGAAGGTCATTCCATCAATTGGCATAGCATCTGTTTCTGCTCCTTTTCTTGCTGCGTGAGGAAGCTAGAGACATAACAGGAAATAAATAAAAAGAGGGGTGTATTTAATGAGGAATTTCCAATATGATGCAAGATTTTTACGTGCGGCATACCTCCTCTTGCATCAATGTCAGTTCTCCTAGTCTCGGCGAAAGTTGAAGGAAACGAAGCACAGTATAGAAATCCTCAGTTAAACACCACTTACCAATTTCAAGAGTTGTGAGCCTCTCAAACACTGGACATGCCGGCAGCTCCTTTTCCAACATAACCTTGACGTCAGAACCAAATAGTGCGAGTGTCTTGGCAGATAAAAGTACTCCAATAAACTCAGATTCACCATCATATTTCTTCCCCCAAGTATCTATGTGTGCACTCTCTAGAGATGGTTTCTCTCCCCAAGAAACATCTTGCAGTGCACAACCCTGGCACTCAAAGTGAACGAGATGAGGGGCGGAAATTGTGAATCTTTTGGGCCCATGCATGAAGCCATCAAGAGTTAGCCTTTTTAGCACTTTGGAGGCAATCAGATCAAGATATGTTGCCGAGTTTATCAAATGCAAATCTTCTAGGTTAGGGCTCCGACCGATGAATTGGTTCAGAGAAAGCTGGTCCACTTCTACATCAGAGAGAGTCAACTTTTTGAGAGAAGGAAGTTGAATTATGTCCGGAAGCACAAGGCCTACGTGTTCAAGATCTTCATCAGGGGCTTCTCCCATCTGCAAACTTAGCTCCTCAACTGAACGGCAGGTGAAAATGCGAGACGGTAAGGCCGTTTTATCATACATATCCAGTTCCACATCAAGCACTTTAACATTGTGCTTCACCGCATAGAGGATCCACTTCCTAAGATCATTGCAGTTCAGTGGAAGATAATGAAACCAATAAAGCTGGAAAGTATGCAGGTCTACTTTAGAACGGATGAGTAATAGGTTGTCCACAAAGCGAGCAAATTTCTCAACCTTCCAATGTTTAAAATCTCTGTAATCAAGGCATATGAACTGCAGACACTCAATCACTCTCATCCACCTCCTAGAAAGCCTGCGCATCCTCACAATTGCTCTAATCCTTGAAAAGGACAGGATATGCTGTAGGACCTCTCCAGGCAGCACACTGATCAAATCAGTGTCACTCTCCATTGCATGCTCATCAGTGGACTCCATATCAACCCTACTTCAGATTCCTTAACCACCTGACACCAGCAATGGAGGGAACAGGGGACTGCTCCCTTGGAATCGCCGGGGGAAGCCGACGCCACACGAGGCTAGGGTTTAAAGGTTTGTTCAGAGTTCGGAGTTTTGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0042000.1 | 1 | 33485116 | G | A |
| Osa01LNT0042000.1 | 1 | 33484767 | G | A |
| Osa01LNT0042000.1 | 1 | 33485305 | C | T |
| Osa01LNT0042000.1 | 1 | 33485661 | A | G |
| Osa01LNT0042000.1 | 1 | 33485851 | G | A |
| Osa01LNT0042000.1 | 1 | 33486283 | G | A |
| Osa01LNT0042000.1 | 1 | 33487184 | A | T |
| Osa01LNT0042000.1 | 1 | 33487452 | T | G |
| Osa01LNT0042000.1 | 1 | 33487652 | C | T |
| Osa01LNT0042000.1 | 1 | 33487822 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0042000.1 | osa-miR1440b | Translation | 4.0 | 16.392 | 1 | 21 |
| Osa01LNT0042000.1 | osa-miR7693-5p | Cleavage | 4.5 | 17.08 | 1 | 24 |
| Osa01LNT0042000.1 | osa-miR530-3p | Cleavage | 3.5 | 23.072 | 1 | 21 |
| Osa01LNT0042000.1 | osa-miR1850.1 | Cleavage | 3.5 | 10.363 | 1 | 21 |
| Osa01LNT0042000.1 | osa-miR1857-3p | Cleavage | 5.0 | 20.451 | 1 | 21 |
| Osa01LNT0042000.1 | osa-miR2097-5p | Translation | 3.0 | 12.935 | 1 | 22 |
| Osa01LNT0042000.1 | osa-miR2931 | Cleavage | 4.5 | 18.081 | 1 | 20 |
| Osa01LNT0042000.1 | osa-miR5147 | Translation | 4.5 | 9.261 | 1 | 21 |
| Osa01LNT0042000.1 | osa-miR5149 | Cleavage | 4.5 | 11.653 | 1 | 22 |
| Osa01LNT0042000.1 | osa-miR5159 | Cleavage | 4.0 | 15.69 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0042000.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0042000.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0042000.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0042000.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0042000.1 | 1 | nan | Morphological trait | Root | RM212 | R2417 |
| Osa01LNT0042000.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0042000.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Osa01LNT0042000.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)