>OsaMtLNT0452700.1

GTTGGGCATCCGAGTGCTTCAAATGGCATGTTGTTTCTTAGTGCTTCCCTGCGATTTAGGGACTCCGCAATATTATTATATCCTGTCATTCTTTCCCTATTGAAGGTGGATTAACAACCTTTATTTGGTTGTATTCTCATTCATCTTAACCAATCATAACACCAATTAGGTGTGGTAGTTGGCCACTACTTATGAAATATCTCAAACCCACGAGTGATTTATCATAACAAAACTGTGCCCAGTTCTCTTTGTCTTCGAGCTTTTATTCCTCAATCCACTTATTCGTTCCCTTCTTTCATATACCTCCCCACCAATAGATAGAGACAAATGGGAATAACCGAACCACGTCTACAAAATGCCAGTACCATGCAGCTGCTTCAAAGCCAACGTGATGCTTCTTGGTCAGATGACCAAGATATTGGCGAATACCACATACGATCAAGAAAAGAGTACCTATAATCACATGAAAACCATGAAAGCCAGTTGCTAAGAAAAAGGTAGAACCGTAAATACTATCCGAAATAGTGGAGGGTGCTTGGTAATATTCCATTCCTTGAAAGCCAGTGGATACTAGAGCCAGTGAAACGGTTGCTACTAAAGCGTAAACTGCTCGTTTTTCCTTCCCCGCGAGTATAGCATGATGAGCCCAAGTTACGGCAGCTCCGGATGAAGGGAGAATAGGGGTATTAAGAAGAGGGATTTCCCAAGGATCTAAAACCCCAATCCCTTTTGGGGGCCAAATACCTCCGATCTCTACCGTAGGTGCCAAAGAAGAATGAGAAGAAGCCCAAAAAAAAGCAAAAAGGAACATAACCTCCGAGACTATGAAGAGAATAGAACCATATCGAGGTCCTAATTGTACAGCTTTTGTATGATGCCCTTCCAACGTGGATTCACGTAGAACATCCCGCCACCATACGAACATGGTATAAAGGAGAAATATTAGGCCCAAACTGAGAAGTGTTGCACCCCCTTGAAATGAGTGCATGTACATCACACCTCCTACGGTGGTTGCCAAAGCTCCGAGTGAACCCGAAATAGGCCATGGACTTGGATCTACCAAATGATAAGAATGCCTCTGAGATTCAATCATAAACCACTTTGCCCCGGTTGTATGTAAACCCCCCTTCACCCCCATCCCCTAAAGTGGTAAAGAAGGAGGCTCTTCTTTGTCTCATTAGGACAAACAAATAGGAAGGGATAGTTCTTTCATTGCATTGATAGAAGTGAGACTATCAAAAGATTTCTCTATTATTTAGAGAAAAGAGTTGGCGTGGATTCTACCAACGAAACGTTGAAGTTTTTTATTGGTCTTTATCATGCCCTCTCCGTTATGCCCTCGTTAGACCTATCCATCCATTCGTAAGGTCGTTCAGAAGCAAAGGCCTACTACTATACTATACAAGTACGCTGGTCATCAAACATCAAAACATTACCCATTTTCATTTATATCCCCCCCCACCTTATAGTCCTACACCTTTCTTAGGACTATCAAGCCTTCCCGAATTAGGTCTATGGGTACGAAGGCCTCTCGAATTTGTTCTACAGTAGAAGCTTTGAACGTAGACCCGGATACAAATCTTTCACTCACTGAAAAGTGAAAACCTGTAACTATATCGTCCTGAAGACGGATGCGACGGGAAGAAGTGGCATTTAGAAGTGTTGCTGACTTTACATTTAGGTTTCGGCATAACAAAGCTTGCACTGTCTTTTCGCACTTAGGCGCACAGCGTGCCGTTGGTAATGATTCTACTACGGCGCTGCAAATTCGCAAGCTGATCCTAAGTAATCGTTGTTGTTCATTGGATTCCCCCGGAATTACTTCGTTAGGATTGAAGAATTGCTGCAATTCTTCCTGAATAGACTCGATTCTCCCGTCGAGAGTTTCTTTGAAAGTCTTACCTAAACTCTTCCGACTGAATATGAGAAAGCCTATAAAACAACGAGCTACTATCATTTCTTCATTATAGATTGAGATCTTCTTCGGACTTGATGCACAAATAGATGGAATAGCAGCAAATAGCATATTTCTTCTATCCTTCTTATCCGTTGAACTCAATCCCATCGTGGGGTAACTATATCCTTTTAAGCTCTGCTCCCAAAACAAAAGAGAAAGGGAGACGATCTCAACTGGCCTTGGTTTTTCCGAGGAAAGCAATTGTAAGAGTCACTATTTAGAAAGCGTTATTATTATACACGACAAACCTACCAATAAAACAAAAGGGGAAACAGAAATGATTAACCCCTCGACTACCTTTTTTGATTCGGGTTTCGCTTCGGGGGGGGTCGAGCTCGGCACTGGCTCAGCTCCCCACCAGAGCTCCTTTATACACCTATAGAGAAGAGATACTGTAAATATTCAGGGATATTTACTGTATCATAAATATGATCTATCAAAGGAGGAAAATCCAAGCGAAAAAGCCATGTTACCACGTTCGTTATAACCATACTAGGTGTGTCATTACTATATCAATCTTTATGTATTTCTTTCCCTTTTTTCGCATGTGATTTGATTGCTGTAGTAATTTAATTTAATTAATAATTTTTCTCTATGCGGCGGGTTCAATCATTCGTCCAAGTACAACTTTAAGATTACGCCAGTGTATGTCACATTGGATCCTCAAAGGCGCGTAGCGACCCAGTACAACTCAGGGTCTGCTTCACTCCACCGGCCCTCAGAGAATCGATAAGATGATTTCAAGGGCGCAAATTCGAAATAAGTTGGCTTTTTTCTTTCGCTTTTGAAGGGCAATGTGTAAAGAAAGAGTGCTGCGTTCTTTAATTACGTATCATACTGTTCGC

Explanation	CPC Score
noncoding (weak)	-0.605189

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
OsaMtLNT0452700.1	osa-miR5788	Cleavage	5.0	15.396	1	21
OsaMtLNT0452700.1	osa-miR5804	Cleavage	5.0	20.236	1	21
OsaMtLNT0452700.1	osa-miR5817	Cleavage	4.5	16.469	1	24
OsaMtLNT0452700.1	osa-miR6255	Cleavage	3.5	23.44	1	22
OsaMtLNT0452700.1	osa-miR529b	Cleavage	4.0	12.742	1	21
OsaMtLNT0452700.1	osa-miR529b	Cleavage	5.0	16.205	1	21
OsaMtLNT0452700.1	osa-miR1874-3p	Translation	5.0	14.071	1	24
OsaMtLNT0452700.1	osa-miR2097-3p	Cleavage	4.5	20.866	1	22
OsaMtLNT0452700.1	osa-miR2105	Translation	5.0	19.474	1	20
OsaMtLNT0452700.1	osa-miR2097-3p	Translation	4.0	11.045	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus