© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0042200.1
CAATTACTATATGACGAAAGTTATGTGAACCCTACAGCAGTGTAACACCTGTAGCATCAAGGGTAGAGATTTACTGTACATTCACGCAATCATAATCTTCCTTATTTGCGGAAGTTGCTTCGTAGTAACAACAAAGAAAACAATTGCATACCTACAGACTACAGTGATATGTACAGCTAAAGTACAGACTAAAAGCCAGCATATATCAAAATGCAAGGCGTAATAATGTGTAACAGATCAGCAATTTCGCGGTCTGTTATAATTCGGAGGCAGAGAAGGACACCTTTCATTCATGTGAGGGTACGGCTGCATGGTGTTGTATCCAGGCAACTCCATTCGATACCTGCCCTTTATTTGGCAGAAGGGGAGCTTGACACTGTCATCTTTGTTGCACCACACGGGAAGCCGTGTCATATTGTTCTCAAAAAAGTTGAGGCTGTAAGCATCTTTTATGGTGAATTCAGTAACTTCTATAGAGCTGGCAATTGGGTCAAAGAGTCCAGCCTCCTTGTACATCATAAGGACGTAAGCCACACAAGAAGCAGACTGGCCATCAGTATAGACCCACTTATCTTGCTCAGGAACTGTTAGCAATTTGTCAAATGTCATCCCACGCTTCTCTGATTCCACTATGATTTCAGGTAGATCAAGACCCTTAGTTCCAAGCCGTTTGTTAAGGGCTTCTTTCCACATGTTGGCAGCATACTCTGGTTGAAGTTTGTTCCACATAGTCATCACAGAGGCAACCACATGAGCATCTAATGGCGGTGGATAGTTGTCGCTTATGGTATCAATCCAACTAAAAATCATATTGTGGTACCCATAAGGTTTTCCATCCATGCTTTTTGCATATTCCCAAGCTGCTGTCTCATTAAATTTTGCACGCAAATCTGGATGCAAAGGTAGTAATGCAATCTGAGGATTGGAATCATCCTTTTTTACTTCAAAGTCCCACCATTCTTCCCATGGCAAGATAGCAATAATATCTTCTCCCTGTTCATTCTCATGACCAGATTCCCCAACCCAAAGCTTTCCTTCAGAATCCCTGAGGCAAACTGCGGTATGGCCAGCATAAGCTCCAGTAACCCACTTCTCTAGGGTTTCAAAACCACCCCAGCGCCCACGAATTTTTGATAAAACCAAAAAATCTCCAGAGTGGATATCGTCAACATTTAATTCTGACACCCAAGGTTTCGGACGTTCCTCGAAGGTTGCACCCATATGCTTCTTTAGAAATGCAAGATTTGAATTCTCACCCCATTGAGTATTTGTAAACAGGGGGAAAACATCCCAAAGTGCTCTAAGTGTTCCAATTGTTCCAGATGGCATCAGGAATATGGATACTCCTTTGCGTTTTACATATTCATATTCAGCCTCGCTTTCCCATTCTTTGAAATCAAGGGTATGCTCACGACCTACAAAGTAGTAATCCCATGTAACACGATATGGTGTTGCAAACACATAAAGGTCTATGCAAGTCCAGCTATGAGCTTTGTTTGTCTTGATGTGGAGCGTGCCGCCTCCGTACTTGGAGCCGGAGTCGTTGTGGAGGACCAGCCACGCCTCGTTCTCGTAGAAGCAGGCGCCCTTCCACTCCAGCCGCGAGCCGACCGCGCCCGGCCTGTCCGACGCCGCCCCGACGAACACCGGGAAGATGTCCGACACGCCGCGGAGAGCGCGGAGCGCCGCCATGGCCGCGGTCCGCGGCAGGAGGGGCAGGACGTCCATGGGGCTGAACGGCAGGGTGGCCCGCGGCAGCGCGCCGACGAGGCCGTCGACATCGCGTGGGCCGGCGGAGTAGAGCAGTGCCGCGGCGAGCGAGGCTGCCACTAGCAGCAGCAGCGCAGCCGCGATGAGCGTGTTGTTCTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0042200.1 | 1 | 33610003 | A | G |
| Osa01LNT0042200.1 | 1 | 33613915 | A | G |
| Osa01LNT0042200.1 | 1 | 33615006 | A | G |
| Osa01LNT0042200.1 | 1 | 33615312 | A | C |
| Osa01LNT0042200.1 | 1 | 33615355 | T | C |
| Osa01LNT0042200.1 | 1 | 33615387 | G | A |
| Osa01LNT0042200.1 | 1 | 33615399 | C | T |
| Osa01LNT0042200.1 | 1 | 33615433 | A | G |
| Osa01LNT0042200.1 | 1 | 33615706 | A | T |
| Osa01LNT0042200.1 | 1 | 33612319 | T | C |
| Osa01LNT0042200.1 | 1 | 33615150 | A | G |
| Osa01LNT0042200.1 | 1 | 33615442 | C | T |
| Osa01LNT0042200.1 | 1 | 33610966 | G | A |
| Osa01LNT0042200.1 | 1 | 33610802 | A | G |
| Osa01LNT0042200.1 | 1 | 33610792 | T | G |
| Osa01LNT0042200.1 | 1 | 33615214 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa01LNT0042200.1 | DTM_#DNAt_MULE_japo_Os2503 | Chr1 | - | 33610790 | 33611035 | 245 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0042200.1 | osa-miR7694-3p | Translation | 5.0 | 18.745 | 1 | 22 |
| Osa01LNT0042200.1 | osa-miR167h-3p | Cleavage | 5.0 | 18.767 | 1 | 21 |
| Osa01LNT0042200.1 | osa-miR1854-3p | Cleavage | 4.5 | 10.316 | 1 | 22 |
| Osa01LNT0042200.1 | osa-miR1869 | Translation | 4.0 | 21.992 | 1 | 24 |
| Osa01LNT0042200.1 | osa-miR3982-3p | Translation | 4.5 | 24.602 | 1 | 21 |
| Osa01LNT0042200.1 | osa-miR5493 | Translation | 5.0 | 24.741 | 1 | 21 |
| Osa01LNT0042200.1 | osa-miR5508 | Cleavage | 5.0 | 21.448 | 1 | 21 |
| Osa01LNT0042200.1 | osa-miR812q | Translation | 5.0 | 10.093 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0042200.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0042200.1 | 1 | qCC-1 | Physiological trait | Source activity | RG541 | RG101 |
| Osa01LNT0042200.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0042200.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0042200.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0042200.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0042200.1 | 1 | gpy1 | Others | Others | RG541 | RG101 |
| Osa01LNT0042200.1 | 1 | nan | Morphological trait | Root | RM212 | R2417 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)