© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0002900.1
GCAACAAATATTTTATAGGGGATCTTAACTCAGGATGATATTGAGGTACATTTTTGCAATTTTTCCTTCTAACAATTACTCCCCCAAAACATTTTGGGATGGATGGAGGGAGTATCAGTCATACTACAACTACTAACTTCTAAAATGGCTGCACATCGTTGGATTCAGTAGGGGGGAAAATTGAACTATATATACTTCACTAAATTTATTTGTTTGATTGACTAGATTAGTCACTTGCAACGATGTACACGTTGGTATACGCGGCGAAATAACAGAATATCTTCAAAGCCGTACGTAGCAATGCTGCATGCAAGGAGAAGAAACTCATCATCAGAGGTTCATCGCATCAGAGTGGCAGCAGGTAGTGGAATTCGGCGCTGTAAGGCTCCACCTCCACCGCCTTCGCCACCGCCGCCTTGCCACCGGCGCCGGAGGCGCCGAGGAGCTCCCTGATGGTGCGCTTGAGCTGCCCCGTCGACGACGACCGGCCGGGGAGCTGGCTGTAGATCCACTCGAGCAGCGACGCGACGTCGTCGGCGAAGTCCCGCATGTGCCAGTGCAGCAGCTTGGGGACGACCACCTTCTTCTTGCTCGCCGCGCGCACCGACGACTCCAGGTACTCCACCTTGGCTCGCTCCAGCTCGTTCGAGATGTCCTCCGCCGTGTAAACTCTCAGTGCAGGCGAGGAGCGGCTGCCTCTGCACAGAGCGAACACGACGTTGGGTTCAGGGTATCCTAGCCCGTAGGAGAGCTGCAAATCTCTCTCCCTTTCGTCCATGATTCCTTGCTTGCCTTCAGGGGAGTGTCTCAGGATGAGATGCTCGATCGACAGAACATTCAGAACTGTTCCTCCCACGTTCACTGAAGCCTGATTCAGCAATCCAAGAAGCTTATCTGGAGATGGAGGTAAGCCATGCTGAAGACATGCATGCATTATGCAGAAGTTGTAGATGTTAATCCAGAACGCCAGCTTCTGCTTGTTCGTCAGAAAACTTGGATCAACATTGCAAAGCCTCTGCATCAAGATTCTCAAGTTCTTGATGTCTACAAGACACGACGATATGCGGCTTACATCAAACGAGCTCTTCGTAAATTCAACAAATCTCTTGTGGCACCCAATCTCCTTCTCTGCTCCGTCGCCGCCCTGTGACATTCTGCGGTTCTTGAGAGTGCTAATGGCTGCGCCGGTGATCGCAGACGACTTAGGAACAAGACTTCTGGGGCCAATGCAGGAGATGTTGAGCTTTGATGTGCTGCTCATCTCCAGCTCTGCTGCATTCGTTGTTTTATTCAGCTTGTGGAAGATGTTCACTGTCAGTCTGATCAGCTCCTCAGAGAGCTTATTTGGGCCACTCAAGCAGATTTTCCTTTCAGGGAGCTTCAAATTCTCAAATGAGTGGCTGCTTCTTCGTATTTGCTCAACTTCCTCACCTTTGCTAGAGACAGATCCAACAGAAGCCTTGCTTTCACATTCAAGAGCTTCATCACTGCCAGGACAAGGTAGCCTTGGTAGCAACTCAGCTCCTTGAAGCTCCCTCCTTCCACCAAGGCTGCAGATGGAGTGCCTCTGATGGCGATTTTGCGGCCAATTCTGCTGCTGCTGCTGAAAAATGCACTGATCAGTCCACTTGCGCTCCCGGTGAAGCCGCAGCCGTAAGTCGTCCACCTTCTTCTCCAGGTAGAATATCTCATCCTCCACAATTGCTAGCTCTGCAAGGAGGCCCCTGATTTTTCGCATTCTCTGATAATCGAAATGGACAGACATGCACCGATAATTGATCAGAGTAGTGTGCTGCTCACTTGCTCAGGTTACTCAGAAGAGTATGAAATACAGCAGAAATTTTACATTGGCTGTTACCACAAGGTGAATTAAAAAGGAATAAAATAGAAAGAATTACTATGAATCTATGGCTCCATCTTGCAAGCGATCGACAAGTTATAACGGGTACGAGTGGCCAGGATCCAAGGGGAGCAGATCTGGTAGATAAGGTGTGAGAGATTATCTGTAGACAAATCAAGATTGTGCAATGAAATGGGCAAACAGTACTTGTATTGTCCTCATGTCAGGAGTCAGAGATCCAGATAACATTGTACGTTGGGGGAAGGAATCCAAAGTGGGCACAGTTTTTCAACCTGAGATACAGTAAGAATCATTCACTGACTCTCTGAGTTTCTGAAATCCCTGACTACGAAAAATTCCCAAGAAGCAATCATCTGTCACAATTATCATAGGGGGATATCCTGGTGTGTCTACTCCATGCTCATTGCAGACAAGCAGCAGGCATAAACTGGACAGTATCAGTATCAGGTGTCAAATCTTATCATGACAACTCTCTCTTCGACTGTACGCCACTGATGAATCACTTGCAATCATGTTTTCATCAAACTTTCTCCAGTCTCAACAGCCTCGACAATGAAATGGAGACACGAAAGAGTCATTTATTGAGGTTTTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0002900.1 | 1 | 2586466 | G | A |
| Osa01LNT0002900.1 | 1 | 2586866 | G | A |
| Osa01LNT0002900.1 | 1 | 2585044 | T | A |
| Osa01LNT0002900.1 | 1 | 2585061 | A | T |
| Osa01LNT0002900.1 | 1 | 2585350 | C | G |
| Osa01LNT0002900.1 | 1 | 2585411 | C | G |
| Osa01LNT0002900.1 | 1 | 2585418 | C | A |
| Osa01LNT0002900.1 | 1 | 2585653 | C | A |
| Osa01LNT0002900.1 | 1 | 2586217 | T | C |
| Osa01LNT0002900.1 | 1 | 2586271 | A | G |
| Osa01LNT0002900.1 | 1 | 2586407 | T | C |
| Osa01LNT0002900.1 | 1 | 2586611 | A | G |
| Osa01LNT0002900.1 | 1 | 2586998 | G | A |
| Osa01LNT0002900.1 | 1 | 2587522 | C | T |
| Osa01LNT0002900.1 | 1 | 2588210 | G | A |
| Osa01LNT0002900.1 | 1 | 2586620 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0002900.1 | osa-miR5808 | Cleavage | 5.0 | 24.191 | 1 | 24 |
| Osa01LNT0002900.1 | osa-miR397a | Cleavage | 5.0 | 18.507 | 1 | 21 |
| Osa01LNT0002900.1 | osa-miR397b | Translation | 5.0 | 18.259 | 1 | 21 |
| Osa01LNT0002900.1 | osa-miR399e | Cleavage | 5.0 | 9.097 | 1 | 21 |
| Osa01LNT0002900.1 | osa-miR399f | Cleavage | 5.0 | 9.097 | 1 | 21 |
| Osa01LNT0002900.1 | osa-miR399g | Cleavage | 5.0 | 9.097 | 1 | 21 |
| Osa01LNT0002900.1 | osa-miR171c-5p | Cleavage | 5.0 | 19.528 | 1 | 21 |
| Osa01LNT0002900.1 | osa-miR172d-5p | Cleavage | 5.0 | 23.576 | 1 | 20 |
| Osa01LNT0002900.1 | osa-miR1428a-3p | Cleavage | 5.0 | 14.268 | 1 | 21 |
| Osa01LNT0002900.1 | osa-miR1870-5p | Cleavage | 4.5 | 14.231 | 1 | 24 |
| Osa01LNT0002900.1 | osa-miR2098-5p | Cleavage | 5.0 | 22.085 | 1 | 20 |
| Osa01LNT0002900.1 | osa-miR5149 | Cleavage | 5.0 | 17.819 | 1 | 22 |
| Osa01LNT0002900.1 | osa-miR5497 | Translation | 4.5 | 20.505 | 1 | 21 |
| Osa01LNT0002900.1 | osa-miR156b-3p | Translation | 5.0 | 15.489 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0002900.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0002900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0002900.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0002900.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)