© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0042800.1
AAGCAAACTATCACTTTTCGAACGTTAATAGATATAATGCTCAAGAATAATCATCATTTTGCACAGCATGTTTGACGAACACCACAAACAGCTGCTGGCAGGCAAATAAAAAGAATTGCCTTGAGAATGTATGCTGAAAGAGGAAAGCCTAGTGTACAACCTCTACTCTCGAAAACACAAACTGACACAGTACACAATTCACAGCCTACATGTATACTCCTGCTGTCACACCGTGAACACTGTAAATTCAGCTACCAGCATGAACTTCATCACCTGGACCAGTGAGCGTAATATTGCAATTTGAGGCAAATTTACGAGCAAGCATGATTGCTGCGTTCCTATCCCTGTCCGTTTCAAAAGCTAAGGTGTAGGACAGGCCTTTCCTTGCCTGCCAGAAAACTGCCGTAGCTGCAGCATTACCCCCACCACGGCTCCCACACAACTTCATTGTGGTCGAGTATGACTCTCTTGCTTTTGTAGACCATCCTTTTCGAAGCTTTATTCTCATTTTTCCGATATGAAATGCATGGACAGAGTTCGATGAGTAATCATTCCCATTCATTTGGGTGACAACCACATTAAACTCCACATCTGCTCTTTTCATTAGAGACTCCACATAATGTTCCAGTCCGGCAGCTGTTCAAAAAGTATGTCAAAGTCAGCTATTTAAGTGCAACTTTGGTGAAACCACGAGCTTGTATTCCCTCAATTCCTTAATATATCTGATATCTCATTGTTTTTCGGATGGTGTGTGTGCTCTAGTCCATAATTATAAACAACACTGGAAATAGGTAAAGGGATGGATGGATATACCACAAAAAAAGATGATAAAAGGTCATCTCAAAACTGTAGAATGAGGTATTTGGGAACACAATTTGAGTGCTCTAAAGATGTGTATTTGAAAAAGGAGGGAAAATCGAATGTCCTGCTGCACTTCTATTGTAGAAAAAAAAAACGGGGGCTTTTGCCCTGAGAAAGCATGTGCCATATGGCAGAATGCATCATGGGGCTAATCCATATGATATGATAGGATAAACCATGCATTACTTACACAGTTAAGCAATTAAAGTATTATGCCACAATATATGAAAATAGATACTCCATACTATGGCATTAAGCTTAGTTCTACTTTTAACTTCCAAAGTTCGAAACAAATATCAAGAACATGTAGACAAAAAAGAAATGTGAAATAAGCTACAGAAAATATTGCAAGAGAAATGGACAGTTTAAATACTTCTGAAAGAAACGCAACTGTGCATATCAATCTACCTGATAAAATAAATAGGATCACCATTAGAAATTTTAAGAGAGCAGTGGGAAGGCCTAACCAGGATTTATAGGTCCCATTGTTTGTATCGTAACTTTCTCTGCATTTAAAACTATCTCTGCCTGTAACAGTCGGCCAACATCAAATGGTTCTGGAGCATATGTAGGTTTTGTTGCTCCCAATATAAGATTTCTATTGCCTCCAGAAATTACACGGTACCATTGAGTTGGACAGCTGCTGATGTCTGGAGCATCATCAAATCGAGGGATAATACAAAACTGTGATCCAAGGATATCAGAACCTTCAAGATCATAGAGGTCAGAGCTATCTTCTTCTAGCCTCTTGATCATTGCAAGCTCTTTCATTAGCTGATTGCAAAGCTGATTTTTCTCTGCAATGAGAGTTCGCAGTGCCTTAAGCTCAAATTCCATGTCCATTACCTTGCTTGGCTGGTGTAGCATTTTTATTCTTCTAGCCTCACGGACCTCTTTCCTGAGTCCCTCTATCTCCTCCTTTTCCCTGCTACTTGATGCTGCATCATGCTCCTGCAATCCTTTCTCGACTATAGCAATTGCAGTTCTGGCCTTCTCAATTTCCGCTAATGCAAGAGCCCTTTCCTCCTCTGCCACCTTCCGGGCATCTTCAGTAGCCTGCTTGAGGAAGCTAGCTAACTTCTTTACTTCAGCCTTTTCATATATTAACTCCCCTTCTCTTTGGGTCAGCTGGACTGCTAATGCTTCCACCAGTGAAATAGCTTCATCAGCATCGTCTCTATTTCTACCAGCCACACGGCCTTTCAGAGTGTCTAAAACATCTCTAAGCTTCTTCAGAAGAACCTGCCTGTCCAACGAAGCTGCTTCTCGGCGCTTAGCCTCTTCAGACAGTTTTGAGGCACCTGATAGACCCTTCTCAAACTTCTCCTTCAGGTCACGCACTGAAAGCCGCCTTCGCTGCTCTAGCAGCTGTGCTGTTTCCTTCGCAACGATCTCCTTCAAAGGTACAGCCTCATGTATCTCTTCTGGATCAATGATTTGGTTGTTTGGCCCAATCTTGTAGTCTGGAAAATGGCCCTTGGGGAAGTTAACATCAGAAGATACCATAGCAAGTGCCTCCTTCTGCATGCCTTCTCCAGAGTCATGGATGACCCTTGTCATTTGAAGTACTCCAATCCTAACACCCAGGTGCGCGAGGCGGCGGGTTCCCGAGGTCGGCGGTGCGGGGGCTCCTTGCGGGGGCCGGCGGCGCGAAGCGGAGGTGTGCGGCGGCTCTCGAGGCGGTCGGCTAGGCCGGCGGAGGCGCTAGGAAAGCCGAAGGAAGAAGGGAATCACTGCAAGCCCCCGATGGATCCCCCCACTCCACCGCCACGCCAAGTCCACTCCACCAGAACGAACCGGCGGAGCGGAGGGGGGGCGCGCACGAGAGAACCTCCTAGGCTTCGAGGCGGCAGGCTGGCGGCCGGGCGGTCGCCTGTGGTGGATGAACGGAGGAGGAGGCTACTGCCGGCGAGGGGACGGAGGAGGCCACGCGAGGTGGTTTTGGAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0042800.1 | 1 | 34154278 | C | A |
| Osa01LNT0042800.1 | 1 | 34156791 | G | A |
| Osa01LNT0042800.1 | 1 | 34153611 | A | C |
| Osa01LNT0042800.1 | 1 | 34154208 | A | G |
| Osa01LNT0042800.1 | 1 | 34154310 | C | T |
| Osa01LNT0042800.1 | 1 | 34154404 | T | C |
| Osa01LNT0042800.1 | 1 | 34154723 | G | A |
| Osa01LNT0042800.1 | 1 | 34155636 | G | A |
| Osa01LNT0042800.1 | 1 | 34155702 | T | C |
| Osa01LNT0042800.1 | 1 | 34156591 | A | C |
| Osa01LNT0042800.1 | 1 | 34156661 | A | T |
| Osa01LNT0042800.1 | 1 | 34156709 | A | C |
| Osa01LNT0042800.1 | 1 | 34157623 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0042800.1 | osa-miR5830 | Cleavage | 5.0 | 13.953 | 1 | 24 |
| Osa01LNT0042800.1 | osa-miR396a-5p | Cleavage | 4.0 | 17.747 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR396b-5p | Cleavage | 4.0 | 17.747 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR396c-5p | Cleavage | 4.0 | 17.747 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR444a-3p.1 | Cleavage | 5.0 | 19.814 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR528-5p | Cleavage | 3.0 | 21.971 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR529b | Cleavage | 4.5 | 9.619 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR444d.1 | Cleavage | 5.0 | 19.814 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR1846a-5p | Cleavage | 4.5 | 12.031 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR1846b-5p | Cleavage | 4.5 | 12.031 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR1874-5p | Translation | 4.5 | 14.378 | 1 | 24 |
| Osa01LNT0042800.1 | osa-miR1874-5p | Cleavage | 5.0 | 14.422 | 1 | 24 |
| Osa01LNT0042800.1 | osa-miR1846c-5p | Cleavage | 4.5 | 12.031 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR2907a | Translation | 4.0 | 23.021 | 1 | 22 |
| Osa01LNT0042800.1 | osa-miR2907b | Translation | 4.0 | 23.021 | 1 | 22 |
| Osa01LNT0042800.1 | osa-miR2907c | Translation | 4.0 | 23.021 | 1 | 22 |
| Osa01LNT0042800.1 | osa-miR2907d | Translation | 4.0 | 23.021 | 1 | 22 |
| Osa01LNT0042800.1 | osa-miR5148a | Cleavage | 5.0 | 18.616 | 1 | 24 |
| Osa01LNT0042800.1 | osa-miR5148b | Cleavage | 5.0 | 18.616 | 1 | 24 |
| Osa01LNT0042800.1 | osa-miR5148c | Cleavage | 5.0 | 18.616 | 1 | 24 |
| Osa01LNT0042800.1 | osa-miR5152-5p | Cleavage | 5.0 | 13.315 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR5152-5p | Cleavage | 4.5 | 20.958 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR5501 | Cleavage | 5.0 | 22.416 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR5507 | Cleavage | 5.0 | 22.156 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR5507 | Translation | 5.0 | 15.544 | 1 | 21 |
| Osa01LNT0042800.1 | osa-miR2275c | Translation | 4.5 | 12.511 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0042800.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0042800.1 | 1 | qLEJ-1 | Morphological trait | Shoot/Seedling | RM212 | RM297 |
| Osa01LNT0042800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0042800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0042800.1 | 1 | Pi35(t) | Resistance or Tolerance | Blast resistance | RM1216 | RM1003 |
| Osa01LNT0042800.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0042800.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0042800.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0042800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0042800.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0042800.1 | 1 | nan | Morphological trait | Root | RM212 | R2417 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)