© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0042900.1
CATATAGTGAGTTCCAATTGAGCTATAGCGTTTGGGAATGGGATGCACTGGGAGCCCTGGACCCAGATTGCAGTGTGATTGATGCGGTTTGAAGCGAGTCCATCGTCGCCGCAGGTGAAACTAACGCCTGCACAGAACCGAGACGAGCCAGGTGCACCCTCACACACCTCGAGTTGATGATGCCTGCAGCACAATGTAATGAAACACCCATCCCCTCGTACCTTGATGCACTATACACAAACTTGAACGTCGTGGAGATTAGCAATTTTGGCATTCCGCCAACCCTGAAGAAAGTAGGACATATATAGCTCTGCTGTGCCTGTATGGTGTTTTTCTTCCATTGAAACTGACAGTCGGAGTCCGTACCGTATTCCAATTGATAATGTCCTCTGCAATTGGAAACCGATGGAGTGAACACCGAAGGCTGAGTCAGTGATCTCCATACACCCGATGAACCCCATCAACAACAACAACAACAATCGAGCAGCCTCTCTCCACACACATGCATCATGGATTTGACCCAGTGAAAGAACACCATCAACCACTTCCTTCCGTCCTGCAGTGATATTCTGCGCAGTGCCAGCGATCGAGATCCATCCGATATAGGAACAGGATGGACCGGTAAGTCGGGCGGAACGTACGTGTCGTCTGCTCGTCCGATCGTTTTGAACGAGCAGTACTAGAGGGTTCACCTGCTACACACGCGTGATGGTCGGCCGGCTTGGCGTGTGTGCTGGCGTATGACTGCTTGATGGACTGAATTGTTGGCAGCCATGATGATCGATCGCGGACGTACGCCCTCGCAGAGTGTGCATTCCTTCCACGCGCGCGCGCACGCCGCACGCGCTCGTGTCAAACTCGCCTGCATGGTGGGCGATTTGACAATTGTGTAAGATTCGCGTCTCCGCGTGTTAACAGTGTTGATCAAATCAATAATTGTAGGCCTTGCTTAGATAAAAAAATTTGGCAAAAAAAATCACATCAAATATTTGGACACATGTATGAGACATTAAATGGAGAAAAAAAAATAAAACCGATTGCACAGTTTGTATGTAAATTGCGAGACGAATCTTTTGAGCATAATTACGCCATGATTTGACAATGTGATGCTACAGTAAACATTTGCTAATGACGGATTAATTAGACTTAATAAATTTATCTCACAGTTTACAGACGGAATCTGTACTTTATTTTATTATTAGTATACGTTTAATATTTTAAATATGTATCCGTATACTTAAAAAATTTACACCCAGAAAACTAAACACATCCGTAGTCTGAAAATAAATGTCTTGTTTCTAGTCCGACGCAGACAGTGAATCATCGTCCTTTTGCCATCAGTTTCTCTCGCTTTTTTTTTTTTTTGGCTTACTGGTAAATTGACCTCTGGGTGATATATGATGATGGAGTTGTAATACTCATTACTTTGGTCAAAAGTCAAACTACATTAACTTTGGTTAAAGTTAAATTGCTTTAACTTTGACCAAGTTTGTGGAAAAAAGTAGTAACATTTTCAACCCAAAATAAATTTATTATTAAATATATTCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0042900.1 | 1 | 34256965 | C | A |
| Osa01LNT0042900.1 | 1 | 34257816 | A | G |
| Osa01LNT0042900.1 | 1 | 34257875 | A | G |
| Osa01LNT0042900.1 | 1 | 34257942 | C | A |
| Osa01LNT0042900.1 | 1 | 34257971 | G | A |
| Osa01LNT0042900.1 | 1 | 34257985 | A | C |
| Osa01LNT0042900.1 | 1 | 34257989 | G | A |
| Osa01LNT0042900.1 | 1 | 34258314 | T | C |
| Osa01LNT0042900.1 | 1 | 34258001 | A | G |
| Osa01LNT0042900.1 | 1 | 34256988 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0042900.1 | osa-miR5831 | Translation | 4.5 | 24.561 | 1 | 24 |
| Osa01LNT0042900.1 | osa-miR438 | Cleavage | 5.0 | 16.877 | 1 | 21 |
| Osa01LNT0042900.1 | osa-miR1436 | Cleavage | 4.5 | 14.502 | 1 | 21 |
| Osa01LNT0042900.1 | osa-miR1881 | Cleavage | 5.0 | 16.584 | 1 | 24 |
| Osa01LNT0042900.1 | osa-miR2101-5p | Translation | 4.5 | 13.439 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118a | Translation | 4.0 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118b | Translation | 3.5 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118c | Translation | 4.0 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118d | Translation | 5.0 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118e | Translation | 4.0 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118f | Translation | 4.0 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118g | Translation | 3.5 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118h | Translation | 4.5 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118i | Translation | 2.0 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118j | Translation | 4.0 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118k | Translation | 4.5 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118l | Translation | 3.5 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118m | Translation | 4.0 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118n | Translation | 3.5 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118p | Translation | 4.5 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118q | Translation | 4.0 | 21.34 | 1 | 22 |
| Osa01LNT0042900.1 | osa-miR2118r | Translation | 4.0 | 21.34 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0042900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0042900.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0042900.1 | 1 | nan | Morphological trait | Root | RM212 | R2417 |
| Osa01LNT0042900.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0042900.1 | 1 | qLEJ-1 | Morphological trait | Shoot/Seedling | RM212 | RM297 |
| Osa01LNT0042900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0042900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0042900.1 | 1 | Pi35(t) | Resistance or Tolerance | Blast resistance | RM1216 | RM1003 |
| Osa01LNT0042900.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0042900.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0042900.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)