© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0043300.1
AATCACTGGATAAGCTCTAAAATTATTCTGCAAGTATTTACATCCCCACTTTTCTCAAAAATGTTACAAATTTGCCCAACAACTCATCATATGATGTCATATACAGACTACAATATGCATTGAACATTCACTTGAAGACATACATGGAAAGATAGTGATCCGAGTCTGTCACCAATACATGAACATTGTGAAGAATCTAGGAAGTAGGGAATACCTCAATTCCTATCTGATATAACACTAGAGATACATTACCTAACAATATCCTACTTACGAATCAATTCAATTTATTTATTCCCTTGGACGGGCGAGCCAAAGAGAACTCAGGGCACGAAGCCGGGAGAAGTAGTCACTTATTGCAAGTAGAGCTCGTGCTGACTGGCGAGTGGTTAATATGCGCTGCATTTGCTGAAGAGTCTGAAGCCGCAGATTATCAGCCTGCCGTAGGAAGTTTTCTAGGGTACCAAGTTTCCCCATAGCCATTGCCATTTGTCCCATGTAGTTTGCAACATTACCAGAAGATCCTGCAGGGCCGAGAGATCCTGATGCCAGGGTCTCTGCAAGCGACTGTTGTAGTGCTTCCATCCCTTGAGAAAGAGCATCTTCAGCCTGTTGGGAGGATTGTTGCAGGTTGGCTATGCCAGCAAGCTGCTGCTCTGTAAGAGGCTCTAATTGCCCTGCCAGTAACTTAAGAAGCTCAGATGATCGGAAGCCACCTAGCCACATGAAGCACCTCTCAGCAGGGGTTTTCCACATTCCCGACAGCACATGAAAAACGTCTGCTTTGGCTGCCACACCCTTGAGCTTGAAAATTTCATTGTAGTGTGCCATAATACTATCAACTGTACTTTTGAGATCATTATCACCAGCGTGTGCATTAACTGCAGCCCTCAACTCATTTATATGTTTGTTATGCTCCTCCAACCACCGTGCATACTCCATGTCAAATGCCAAAGCTCCATTTCCACTCGCTGAGTGGGACTGATCACTCGATGTTGATATAAAAATGCCCTGTTGACGAGCCCGCTGAAGCTCTTGCTCTATCTGAGTAAGTTTCAATCTGCTACTCTCAAGGTTTTGGATATATGCCTTCTTTCTTAAACGGCTTTTCCTAGCAGCTTCACGATTTTGGGCAAGGCGGCGAAGTGTCTTATGATCTAGTTTGTCCTTTGACCTGTCACTAGAATCAGAAGCAGTGGGAGCAGCTAACTGTCCTTGTTCAAACATCTGATTCCTCTCATCAGTGTCTGGATCTGTTGATGTATCAGTCCTTGGACTTGTATCAGCAATAGTCGACTCCCCCCAATTCTCAACGTTACCAGTCCTTATAGTTACCAAATTCAGTTGTGCTCCCTTTTGTGGGACCAGTGTCTGAGGGTCAACTACTGTTACTGTTGCTGTTGTAGTAATATTAGACGGAGAAATAGACTTTACATAATTCTCAAATTGGAGGGGGTCATTGATAATGGTATGAGCATTTGACTTCAGATTGAACAAACCATTTGTACTGAGATTAGCGAGATCTTCTATTCGGAATCCAGCAGACTGCGCAAGTGCCCCAAAATCAGTAACTTGAGTAGGTTGCACGTTGTTCAAATTTGTATGGATGGCGTGCTGAGGAGCCGCGAAGCCCGACATCCCGCCGCGCGCGTCCGCCGCCGCCGCCGCCGATGCTGAAGCCGCCGCTCCTCCTAGCCTACCACCCTCCATCTCACCACCAACAGCAATCAACACGCGCCATGGCACTCACTCTGAAGCTCTCCACGCCTCATGCCACCAACCAACCAGCTCGCTCAAGAAGAAGCACGGATTCTGTATCTCTCTCCAAGATAGCCGCCGCCACCAAATCAGCAGCAGCCAAAAAAAAAAAAACAAGAACGCTAAAGCGCGGGGCTGTAGAAAATGGTCAGGATGTTTGCACGGTCGAGTAATCTGATTGAGCTATGAGGAGGGGCGAGGAGGTGGCGTGCTGAGGAGGAAGCAAGCGCGCCGGCGGCGAAGGAGAGGAGGAGATGGTGAAGTGGGGGGAGAGAGACCACCACCTCACCAGCAGGAGCAGCCAGCAGAGCACACGGCAGCAGCAGGAGCAGGAGCAGGAGCAGAGGAGGAAGGAGGAGGAGAGCTTGAGGTTGAGGTTGAGGTTGGGTTGGGTTGGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0043300.1 | 1 | 34308527 | A | C |
| Osa01LNT0043300.1 | 1 | 34312687 | T | C |
| Osa01LNT0043300.1 | 1 | 34307022 | G | A |
| Osa01LNT0043300.1 | 1 | 34307050 | G | T |
| Osa01LNT0043300.1 | 1 | 34307347 | C | T |
| Osa01LNT0043300.1 | 1 | 34308421 | T | C |
| Osa01LNT0043300.1 | 1 | 34308513 | T | C |
| Osa01LNT0043300.1 | 1 | 34308845 | G | A |
| Osa01LNT0043300.1 | 1 | 34308869 | C | G |
| Osa01LNT0043300.1 | 1 | 34309198 | T | C |
| Osa01LNT0043300.1 | 1 | 34307174 | T | G |
| Osa01LNT0043300.1 | 1 | 34309343 | A | T |
| Osa01LNT0043300.1 | 1 | 34309627 | A | G |
| Osa01LNT0043300.1 | 1 | 34309648 | C | T |
| Osa01LNT0043300.1 | 1 | 34310017 | C | T |
| Osa01LNT0043300.1 | 1 | 34310671 | T | C |
| Osa01LNT0043300.1 | 1 | 34311627 | T | A |
| Osa01LNT0043300.1 | 1 | 34312084 | A | C |
| Osa01LNT0043300.1 | 1 | 34312938 | G | A |
| Osa01LNT0043300.1 | 1 | 34313017 | A | C |
| Osa01LNT0043300.1 | 1 | 34307011 | C | T |
| Osa01LNT0043300.1 | 1 | 34307127 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0043300.1 | osa-miR5834 | Cleavage | 4.5 | 18.54 | 1 | 21 |
| Osa01LNT0043300.1 | osa-miR167d-5p | Translation | 4.5 | 16.954 | 1 | 21 |
| Osa01LNT0043300.1 | osa-miR167e-5p | Translation | 4.5 | 16.954 | 1 | 21 |
| Osa01LNT0043300.1 | osa-miR167f | Translation | 4.5 | 16.954 | 1 | 21 |
| Osa01LNT0043300.1 | osa-miR167g | Translation | 4.5 | 16.954 | 1 | 21 |
| Osa01LNT0043300.1 | osa-miR167h-5p | Translation | 4.5 | 16.954 | 1 | 21 |
| Osa01LNT0043300.1 | osa-miR167i-5p | Translation | 4.5 | 16.954 | 1 | 21 |
| Osa01LNT0043300.1 | osa-miR167j | Translation | 4.5 | 16.954 | 1 | 21 |
| Osa01LNT0043300.1 | osa-miR530-5p | Translation | 4.5 | 15.23 | 1 | 20 |
| Osa01LNT0043300.1 | osa-miR1854-3p | Cleavage | 5.0 | 15.889 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0043300.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0043300.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0043300.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0043300.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0043300.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0043300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0043300.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0043300.1 | 1 | nan | Morphological trait | Root | RM212 | R2417 |
| Osa01LNT0043300.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0043300.1 | 1 | qLEJ-1 | Morphological trait | Shoot/Seedling | RM212 | RM297 |
| Osa01LNT0043300.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0043300.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0043300.1 | 1 | Pi35(t) | Resistance or Tolerance | Blast resistance | RM1216 | RM1003 |
| Osa01LNT0043300.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0043300.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)