© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0043600.1
GGCACACTGCATATCTGCAAGTCTTCAACCGAAGTATTGTTACACCCCAATTACACATGTTACGGGCAAAATGGATCAAAACTATGATGTGTTTTTTCAAGAACAATTTACACAAGCGCCTTAGTGATCAGAAGCCCGGGCAAGTAATAACTAAAGAATCGCTAAGCTATGGAAGTAGGAAAGACAAAACAGAAGGTAGATTCAAAACATCTTCGTGCTGTTCCCCACTCTGCAGTCGCATGTACATACGCTCCTTGACTCTCTGACCACGCGTTGAGACCGTCGAATATGCAACTTGATGTTTACCAGCTTACCAGCAATCATTCTCCATGTAAGATCTTCAGGTCCAAGAGGTCGAGCAGGACTTGAATATAGAAAATGTCTAGAGTACTTCAGAAGATTTGATTGCATTTGTCTGATCCTTTTGGCATCAATGCTTCTCAGGTACTTCACCAGCCAACCAGGTTGAACAGCGTCATTTGACGAAACGAACAAAGCTATCTTCCTGTAGTCAAGTATTCCTTCAAAAGGAAGCTCTAGTTCATCACTGACTATAACTGGTATGCAACCACTAACAATTGCATCAAACAGACGAGCAGAAGATGGAGTATCCCCAGCCGGATTCAAGCAAAAGAGAGACTTGCGCATGCCGTTCTGAGCTGCTGCTTTGCCGTCAGCTCCAGCAGTCCCTTCTTCTATGATTATGCCTTCTGCATCTTTTAGTTCTGTCACAAGTTTACTGCGGATCTTGCCTCCAGCATTCCTTCTCAGTCTTCCTCGAAAGAATAGCAATGTGCTTCTTCTAGATTGAGTTTCTGATACACACTTAGAATCACAAAGATCAACATTTGGAACATATGGAAGGATGACATCCTTTTCCAAATAAACTTGCCCTGGTTTATACCAGTTCCCAGTAGAATCCATGTCAGGCAGAAGCCATATAGCCTTCTTCACAAATCTCCGAACTGACTTAAACGACCATGGGTGATGAACGGGAATTACATGATCTCTGCCTTCTGAACGTTGCCAAGCAGGTTGATCAGTAACCCATTTCAAAGCTTCCTTGAGAGATGCTCCCACACCCTATAAAGTGCCTTGCATTCTTGTTTCTCCAGCAAGAAGTAACTGATTGTTGTGAAGAATGGTACGTAGAAGATGTCTGCTTCTTCTTGCCGCCGAACCCTGATAACATTCTTCAAAAGTCTTTGTGATTCGGGCGCAATGAGATCAGCCCACAGCCAATAGTCAATAGAATGCTGCTCGACGAGCCGGTGCACGGGGCTCCCATTGGAGGTCAGGTTGGAGGTCTCGCGGTACGAGTCCCTGAACAGCCGCAGCAGATCGTACGTGAACCTGCTCGGCATCTCGTACACGTAGACCCTGAGAGGCGCCGGGGCCGCCGGCCAGGCGCCGCCCCCGTAGAGCCTTTCCTCCTCCTCGGCCCGGATCGCGGCGTCGAGGTCGCCGGGGGCCGCGGCGGGGGCCGCGGAGCGGCGGGGCGAGGCGAGGAAGCGGTCGAGGGAGGCGAGGAAGGCGGTGTCGGCGGCGGAGCCGGGGCCGGAGCTAGGGCTAGCGAGGCCACCGGGCGAGGAGGGAGAGAGGAGGAGGGAGTAGGAGGCGGCGAGGAGGAGGAGGAGGAGGAGGGCGGCGGCGGCGAGGAGGCCGCGCGGGGAGGCGGCGCGCGCGCGCGCGAGGGAGGAGGGGAGCTGCTTCCCCGCCATGGCGGAGGCACACTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0043600.1 | 1 | 34485782 | T | A |
| Osa01LNT0043600.1 | 1 | 34486799 | T | G |
| Osa01LNT0043600.1 | 1 | 34487386 | T | C |
| Osa01LNT0043600.1 | 1 | 34488123 | C | T |
| Osa01LNT0043600.1 | 1 | 34488833 | G | T |
| Osa01LNT0043600.1 | 1 | 34489228 | G | A |
| Osa01LNT0043600.1 | 1 | 34489517 | A | G |
| Osa01LNT0043600.1 | 1 | 34485698 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0043600.1 | osa-miR7693-5p | Translation | 4.5 | 22.031 | 1 | 24 |
| Osa01LNT0043600.1 | osa-miR160d-3p | Translation | 4.5 | 23.861 | 1 | 21 |
| Osa01LNT0043600.1 | osa-miR393a | Cleavage | 5.0 | 16.665 | 1 | 21 |
| Osa01LNT0043600.1 | osa-miR160e-3p | Cleavage | 3.5 | 23.861 | 1 | 21 |
| Osa01LNT0043600.1 | osa-miR393b-5p | Cleavage | 5.0 | 16.665 | 1 | 22 |
| Osa01LNT0043600.1 | osa-miR1846a-3p | Translation | 4.0 | 21.742 | 1 | 21 |
| Osa01LNT0043600.1 | osa-miR1846b-3p | Translation | 4.0 | 21.742 | 1 | 21 |
| Osa01LNT0043600.1 | osa-miR2092-3p | Translation | 5.0 | 16.125 | 1 | 22 |
| Osa01LNT0043600.1 | osa-miR2104 | Cleavage | 4.5 | 17.538 | 1 | 22 |
| Osa01LNT0043600.1 | osa-miR2118a | Cleavage | 4.0 | 3.333 | 1 | 22 |
| Osa01LNT0043600.1 | osa-miR2118c | Cleavage | 4.5 | 3.333 | 1 | 22 |
| Osa01LNT0043600.1 | osa-miR2118q | Cleavage | 4.5 | 3.333 | 1 | 22 |
| Osa01LNT0043600.1 | osa-miR2930 | Cleavage | 5.0 | 16.35 | 1 | 22 |
| Osa01LNT0043600.1 | osa-miR5804 | Translation | 4.5 | 18.893 | 1 | 21 |
| Osa01LNT0043600.1 | osa-miR2873b | Translation | 5.0 | 19.009 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0043600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0043600.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0043600.1 | 1 | nan | Morphological trait | Root | RM212 | R2417 |
| Osa01LNT0043600.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0043600.1 | 1 | qLEJ-1 | Morphological trait | Shoot/Seedling | RM212 | RM297 |
| Osa01LNT0043600.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0043600.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0043600.1 | 1 | Pi35(t) | Resistance or Tolerance | Blast resistance | RM1216 | RM1003 |
| Osa01LNT0043600.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0043600.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0043600.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0043600.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0043600.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0043600.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0043600.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)