© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0043800.1
CGCACTAACATAAATTAGCCAAAATAATTATTTCTGACAAGGATAGATATCTCAACAATCAGATCATAGTCCAGCTAGTTCTATCCAGAAATTGAATTTTACAGTAATGTTACAACCCTTCATCTTAGTGAAGTATTTGGGCTTAAAGATTGCATCCTCCTTGCAGTTCTATGGAAGAGCAGCCGATGTCACCACCAAGTATAAGAAAGCTCTGAGAACCTAGATGTGTCCAGCAAATTTACATACTCCTAGCTAGGAAAGTAGCAAGGCCTCAGAAAGATAGCAGTGCTACCAGAACACATACTAGGCTCCTGCTAATCTACACAATACAAATCACTAAGCTAGACATAAGCCAAGAAGAAGCTAGGAAATGATTCTAAACCCCAGGAGGCAAAACTTACAAGCAAGAGCACTTCAAAAACTATAAAATAAAATACTGCGGGCATGATCAGAAATCTGCGGAGCTTGTTCTCCTGAGTTGATACTTGGGTTCTGGTACAGGCACAGCGCAAATTAATTCATCCAACTCCTTTTGCCTCTTTAGCCTCACATTCTCCTCTTCTAAACGAGAAACCTTGTTTTCAAGTTCATTAGTGTAGGCCTGCTTCCTGGCTCTTGAACGGGCAGCTGACTCCCTGTTCTTGATCATCCTCTTCTGCCTTCTCTCCATCAACTTATCTGCCACATCCCCTGACATGCCTCGCTTCCTTCCAGGCGTCTGCGAATCGGACATTCCGCCGATCATTCCTGAAGAAGTCTGGCCATCAGAGTAGGATGGCTCCAGAATAGCACCGGGGCCAACATTAAGTGGCTGAGGGACCAATCGATTCGGAAAATAAGCACCCTGCACACCTTGCTGCCCATGGTGATGAGCATCAGTAGATGCAATCTGCTGCTTATACTGCTCTATCCAGTGTGATCCAGGTGCCAGATCCACAGTCCCGGTTGCTGTAACACCTCTTCCAACCGGATCCACATTGCCTACATCACTAAGCTCCTTGAGAGATCCTTGGGTGACAACCCCAGCTTTGACCAGGAAATCCTCGAGCGTCACCTCCCCAAGCGTCGGCTGCCTCTCTCGCCGCCGTCGACCTCCGCCGCCGCCGCCGCCCGTTTCGGCATTCCTCTTCGGAGCAGCCTGGATCCCCTTCCACACCTCGTCCACCGTCTTCTTGCTGAGCTCAGGCGGCATCGTGATGCTCCCCTGCCGCAGGAGGCCCGAGCCCGGCTGATGCTGCTGGCTACTGGTGGTGGCACCGGCACCGTCGGCGATGGCCAGGCCGTCAGGGAACACGCTCCGGAGCAGCTCGTCGAGGTTCATGCTGTGCAGCGGCTCGCCCAGCTGGCTCTGCACCTCGTCGAGGGTGAGGCTGTACATGGATCCCTGCCTCCCCAGACTCCGCATCCGCCCTCCTCCGCGCCGCGCGACGCCCCCGCCTCCGGCCTTCGACGCCATTGTCTGGCTCCCCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0043800.1 | 1 | 34566659 | T | A |
| Osa01LNT0043800.1 | 1 | 34566809 | T | C |
| Osa01LNT0043800.1 | 1 | 34567158 | T | C |
| Osa01LNT0043800.1 | 1 | 34567401 | T | G |
| Osa01LNT0043800.1 | 1 | 34567715 | C | A |
| Osa01LNT0043800.1 | 1 | 34567823 | G | A |
| Osa01LNT0043800.1 | 1 | 34565916 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0043800.1 | osa-miR5536 | Cleavage | 5.0 | 11.96 | 1 | 22 |
| Osa01LNT0043800.1 | osa-miR1440b | Translation | 4.0 | 16.089 | 1 | 21 |
| Osa01LNT0043800.1 | osa-miR396a-5p | Cleavage | 5.0 | 12.223 | 1 | 21 |
| Osa01LNT0043800.1 | osa-miR396b-5p | Cleavage | 5.0 | 12.223 | 1 | 21 |
| Osa01LNT0043800.1 | osa-miR396c-5p | Cleavage | 5.0 | 12.223 | 1 | 21 |
| Osa01LNT0043800.1 | osa-miR1858a | Translation | 5.0 | 14.596 | 1 | 21 |
| Osa01LNT0043800.1 | osa-miR1858a | Translation | 5.0 | 9.23 | 1 | 21 |
| Osa01LNT0043800.1 | osa-miR1858a | Translation | 4.5 | 8.984 | 1 | 21 |
| Osa01LNT0043800.1 | osa-miR1858b | Translation | 5.0 | 14.596 | 1 | 21 |
| Osa01LNT0043800.1 | osa-miR1858b | Translation | 5.0 | 9.23 | 1 | 21 |
| Osa01LNT0043800.1 | osa-miR1858b | Translation | 4.5 | 8.984 | 1 | 21 |
| Osa01LNT0043800.1 | osa-miR1866-3p | Cleavage | 3.0 | 14.542 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0043800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0043800.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0043800.1 | 1 | nan | Morphological trait | Root | RM212 | R2417 |
| Osa01LNT0043800.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0043800.1 | 1 | qLEJ-1 | Morphological trait | Shoot/Seedling | RM212 | RM297 |
| Osa01LNT0043800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0043800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0043800.1 | 1 | Pi35(t) | Resistance or Tolerance | Blast resistance | RM1216 | RM1003 |
| Osa01LNT0043800.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0043800.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0043800.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0043800.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0043800.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0043800.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0043800.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0043800.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)