© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0044000.1
ATAAATTTAATTTTATTCTAGAATTATAAATCTGAACATTAGATTTATAGTTTTATGATGAATCTAATCGTATCCTAGGTTGTTACATATTAGGAAGTTGAAAACGATATAATTCCTGTGGAAACAATTCTCGATTGGTCCGTCAGAAATTCTTGGTTCTTCATGTTCATCAATTTAACGATTTAGCGACAACAGGACAATAACAAATTAAAAAAAAATCAATATCTTATATATAGCTAAAATTGAAAATGGTAACAATGCTCAATCCGTCGGAAATTTTCACCACCATTTTCATCCCGTCATGCAGCTCTACATGCGGGTACTCAACTGGCTCATATGATCAAAGTCTTTCAAGCATGATTTCATGAAAGCTGCACCAGATCGAATCTACACAAAGGAGAAGAACCGTTGTGAACATTACGTTCATCAGTACATTTTTTTTCTTCCATGTAAATAACCTCAAACTACCAAAGCAGGCCTACATCAGGGTCAGTACTCAGTAACCTTTGCAAAGGGAAAAAAAAACACTCTGCATTTTTGCCCTACCAACAAGGAGTCTAGGTTAGGAGTATTTGGGTAGTAAACTGGTAAGCAACTCGTCGAATATGTATCCAACCATTTCGTTGGAAAGAATAACTAAATTTGCTGCACAAATTTAATCATCACCTTCCTTCCAAGGCGTATGTATAACAGGCACTCCAAGAGCCTGTTAGGAGGAGGATTTATCTACCACTCATCCAAACAGGGCCAAAGAGTACATCTTGACTCCTGAGTGCTAATGACTCAAAAACGAAACTGTCTGACTTCTGCAGGTTATTACGATATTTTTGGAGAGTTCATGCTTCGTGATGAACCTTTACCCTTATTGTTTCCCTGTGGTAAGAGCTCTTCAGCTCCGATTTTCATGTTAGCATTTGATGGCCGCATCTTTGCCTTTCTGTTTAGTACCTCAACTTCAACAATGAAGGTCCCACAAACAGGCCGATGGTCGGAAAATCTAGACTCCCCACGGTAGTAGGATAGTTGCAAAATACCATCCCCGCGCCACAATATTCTATCACACCATGCTGGTGTTCTCCTCTTTTTATTTGATGTTGCAGTCTCACTAGCATAAGCATCTGAGTTATAGGAGTATTTGTATGTTGGAGCAAAAAAAATCTTCCCCTCATTCCACCCCTTAAATACTCTCCCAGCATCACGTTCGATTTTGAGCTGATCCCTTTCAAAGAGAACATCCCAATTATTTTCCATCAAAAAATTTTTGGTATCTGCATAGCTCAGTGCGATACGATAGTTCAGATCTCCGAACCATATCACCTTATCATGCTCAAGAATTTTCTCTGGGATTTTTCGCACACCTCTCCTGCAAATCCTTGAAAACAGTGTAAGCCTCAGTATCTCAAGAACATCAGAGTTCCTCCGGAATTCATCACCTTCTTTCTGACCTGAAGCCAAATGGCTGCAGATGAAACAAAAGCTTGTCTGGTGCAGTGTCATGCTCACTGATATGCATCCCTTGTTTCCAAGACAACCCAGAATTCCTCGCCCTATGCAAGACGTTCTTAGATGACCAATGTGCTGCACTAGTTCCTTCTTCACCCATACCATTACAAAAATGCCAACCATTTGTTTACATGCTATAAGATTATATTTTAGTTCATCCCTTGCGGTGGGAGGAGAAATTACTTCACTGCGCACAGATCCATTAGAATCCCTTGATTGCCCTTTCTTTTCTTCCCGTTCATCCTCTTCTGACGAATCTATTTCGTAAGCATATGCTTTGGGGCAACCAAAGCAAGCATCCCTGTAGGATGATTTGGCCATCTCTACAGGGCAGTTGCAGGCCTTAAGCCGTTTTCGATGGACTGGCATGAAGGATTTTCTAATGGATTTTAGATTAGACTTCTGGAAGATTGTGGAACTACTTGATGTTTTTGCTAGGTCAGAGAACGAAGTATCGAGGCTTGAAGAAGCTCGAGAGACACTAGAATCAACAGAGGGAGATGGCTCATTCTGAAAGACATTGGCATTGGTTTCAGCTGGCCGGTTTAATGCTTGGTTTATAAGAACAAGCCATCTGGCAGCTGGTTCGTTGTCTTCTATTACAAGCACATTGCCAGCATTGAGAGGAACAATTTCCTGAAAACCCAAAACATAAATATCTGAATGATCATCAGGGGGAAGAAAATCATCCAGGTTCAGCTCAGCTGTAGGTGCTTTTCCTCCAACGTTCCAGGTGGCAACAAATATTCTGACGGGCTCAGTTGTTGTATTATTAGGAGTTTGCGCCAGGAAATGACTGAGACGCATGCCCTTAACTGAAAATGCCCTTAGGGGGGAAGATGACGCAGCATTAGAAGAACTTGGACCAAACTTCCCGGTGTTGCAACTTGGTTTGTCTGTTCTGTTTGAGACTTTATTCTCCTTTGCTCCGAAAAGTTTTGGGCGACAACCCTTCATTTTTTCCTCCCCAGTGAAGGCCATTAATCGCTGAAGCCGGTTAAAGAACCTTTTTTGTTTGTCAGTTTGAAGTATGAACACGAGCCCAGTGCATCACAAAGAATCTCGGCTCCTCTCCCCCACGATCCAAAAACCACCCAAACCCACCCCCCAAGGGAGCAGCACCGCAGCTACCGATGCCCCTGCCCGCACCGCAGCCAGACAGCCAGGAGCGCGCGCCCTTCCTCCTACCTCCACCCCTGCTACCATCCACCCGGGGATCCCGGCAAGAGGTCGGAGGCGGCCGAGGAATGCACGGCCATTGGGGCGAGGGCGAGGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0044000.1 | 1 | 34629456 | C | G |
| Osa01LNT0044000.1 | 1 | 34630032 | C | T |
| Osa01LNT0044000.1 | 1 | 34629323 | C | T |
| Osa01LNT0044000.1 | 1 | 34629696 | G | A |
| Osa01LNT0044000.1 | 1 | 34629923 | T | G |
| Osa01LNT0044000.1 | 1 | 34630151 | G | A |
| Osa01LNT0044000.1 | 1 | 34630388 | A | T |
| Osa01LNT0044000.1 | 1 | 34631280 | T | C |
| Osa01LNT0044000.1 | 1 | 34631804 | A | T |
| Osa01LNT0044000.1 | 1 | 34632216 | C | T |
| Osa01LNT0044000.1 | 1 | 34632446 | A | G |
| Osa01LNT0044000.1 | 1 | 34632621 | A | T |
| Osa01LNT0044000.1 | 1 | 34632967 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0044000.1 | osa-miR5825 | Cleavage | 5.0 | 16.915 | 1 | 24 |
| Osa01LNT0044000.1 | osa-miR5827 | Translation | 5.0 | 18.009 | 1 | 21 |
| Osa01LNT0044000.1 | osa-miR5837.1 | Cleavage | 4.0 | 15.806 | 1 | 21 |
| Osa01LNT0044000.1 | osa-miR396a-5p | Translation | 4.5 | 15.101 | 1 | 21 |
| Osa01LNT0044000.1 | osa-miR396b-5p | Translation | 4.5 | 15.101 | 1 | 21 |
| Osa01LNT0044000.1 | osa-miR396c-5p | Translation | 4.5 | 15.101 | 1 | 21 |
| Osa01LNT0044000.1 | osa-miR156l-5p | Cleavage | 4.5 | 11.253 | 1 | 21 |
| Osa01LNT0044000.1 | osa-miR443 | Translation | 3.5 | 22.003 | 1 | 22 |
| Osa01LNT0044000.1 | osa-miR1438 | Translation | 5.0 | 14.986 | 1 | 22 |
| Osa01LNT0044000.1 | osa-miR1440a | Cleavage | 5.0 | 21.932 | 1 | 20 |
| Osa01LNT0044000.1 | osa-miR5150-3p | Cleavage | 5.0 | 14.012 | 1 | 24 |
| Osa01LNT0044000.1 | osa-miR5157a-3p | Cleavage | 4.0 | 17.156 | 1 | 24 |
| Osa01LNT0044000.1 | osa-miR5157b-3p | Cleavage | 4.0 | 17.156 | 1 | 24 |
| Osa01LNT0044000.1 | osa-miR5487 | Translation | 4.5 | 19.009 | 1 | 21 |
| Osa01LNT0044000.1 | osa-miR393a | Translation | 4.5 | 18.954 | 1 | 21 |
| Osa01LNT0044000.1 | osa-miR393b-5p | Translation | 4.5 | 18.954 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0044000.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0044000.1 | 1 | qLEJ-1 | Morphological trait | Shoot/Seedling | RM212 | RM297 |
| Osa01LNT0044000.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0044000.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0044000.1 | 1 | Pi35(t) | Resistance or Tolerance | Blast resistance | RM1216 | RM1003 |
| Osa01LNT0044000.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0044000.1 | 1 | nan | Resistance or Tolerance | Insect resistance | RM543 | RM472 |
| Osa01LNT0044000.1 | 1 | dth1.1 | Physiological trait | Flowering | RG541 | RG109 |
| Osa01LNT0044000.1 | 1 | ng1 | Morphological trait | Panicle/flower | RG374 | RG394 |
| Osa01LNT0044000.1 | 1 | sf1 | Physiological trait | Source activity | RG374 | RG394 |
| Osa01LNT0044000.1 | 1 | ng1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0044000.1 | 1 | nan | Physiological trait | Source activity | RG374 | RG690 |
| Osa01LNT0044000.1 | 1 | sf1 | Morphological trait | Seed | RG374 | RG394 |
| Osa01LNT0044000.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0044000.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RG690 | RG810 |
| Osa01LNT0044000.1 | 1 | nan | Morphological trait | Root | RM212 | R2417 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)